RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 PAPOLBQ9NRJ5 636 aaKnown RBP12.75□□□□□ -0.37
COMMD4-225ENST00000569245 KRT84Q9NSB2 600 aa12.75□□□□□ -0.37
COMMD4-225ENST00000569245 C20orf141Q9NUB4 165 aa12.75□□□□□ -0.37
COMMD4-225ENST00000569245 RASD1Q9Y272 281 aa12.75□□□□□ -0.37
COMMD4-225ENST00000569245 ORC6Q9Y5N6 252 aa12.75□□□□□ -0.37
COMMD4-225ENST00000569245 OR2T1O43869 369 aa12.74□□□□□ -0.37
COMMD4-225ENST00000569245 SMPD2O60906 423 aa12.74□□□□□ -0.37
COMMD4-225ENST00000569245 MITFO75030 526 aaPredicted RBP12.74□□□□□ -0.37
COMMD4-225ENST00000569245 VAMP5O95183 116 aa12.74□□□□□ -0.37
COMMD4-225ENST00000569245 PLAUP00749 431 aa12.74□□□□□ -0.37
COMMD4-225ENST00000569245 IFI30P13284 250 aa12.74□□□□□ -0.37
COMMD4-225ENST00000569245 CDH2P19022 906 aaPredicted RBP12.74□□□□□ -0.37
COMMD4-225ENST00000569245 COX5AP20674 150 aa12.74□□□□□ -0.37
COMMD4-225ENST00000569245 TIMM23BQ5SRD1 257 aa12.74□□□□□ -0.37
COMMD4-225ENST00000569245 C9orf135Q5VTT2 229 aa12.74□□□□□ -0.37
COMMD4-225ENST00000569245 P2RY8Q86VZ1 359 aa12.74□□□□□ -0.37
COMMD4-225ENST00000569245 C10orf53Q8N6V4 93 aa12.74□□□□□ -0.37
COMMD4-225ENST00000569245 LIPHQ8WWY8 451 aa12.74□□□□□ -0.37
COMMD4-225ENST00000569245 GTPBP3Q969Y2 492 aaKnown RBP12.74□□□□□ -0.37
COMMD4-225ENST00000569245 BPIFA2Q96DR5 249 aa12.74□□□□□ -0.37
COMMD4-225ENST00000569245 FAM46AQ96IP4 442 aaKnown RBP12.74□□□□□ -0.37
COMMD4-225ENST00000569245 ZNF385AQ96PM9 386 aaKnown RBP12.74□□□□□ -0.37
COMMD4-225ENST00000569245 GPA33Q99795 319 aa12.74□□□□□ -0.37
COMMD4-225ENST00000569245 TAS2R16Q9NYV7 291 aa12.74□□□□□ -0.37
COMMD4-225ENST00000569245 MALT1Q9UDY8 824 aa12.74□□□□□ -0.37
COMMD4-225ENST00000569245 ENOPH1Q9UHY7 261 aa12.74□□□□□ -0.37
COMMD4-225ENST00000569245 RNF115Q9Y4L5 304 aa12.74□□□□□ -0.37
COMMD4-225ENST00000569245 F8P00451 2351 aa12.74□□□□□ -0.37
COMMD4-225ENST00000569245 ITPR3Q14573 2671 aa12.74□□□□□ -0.37
COMMD4-225ENST00000569245 TRAV36DV7A0A075B6V5 113 aa12.73□□□□□ -0.37
COMMD4-225ENST00000569245 OR5H1A6NKK0 313 aa12.73□□□□□ -0.37
COMMD4-225ENST00000569245 KPNA4O00629 521 aaPredicted RBP12.73□□□□□ -0.37
COMMD4-225ENST00000569245 SNAP29O95721 258 aa12.73□□□□□ -0.37
COMMD4-225ENST00000569245 TGFBR3Q03167 851 aa12.73□□□□□ -0.37
COMMD4-225ENST00000569245 C1DQ13901 141 aaKnown RBP12.73□□□□□ -0.37
COMMD4-225ENST00000569245 NCMAPQ5T1S8 102 aa12.73□□□□□ -0.37
COMMD4-225ENST00000569245 TSPO2Q5TGU0 170 aa12.73□□□□□ -0.37
COMMD4-225ENST00000569245 OR7E24Q6IFN5 339 aa12.73□□□□□ -0.37
COMMD4-225ENST00000569245 KLHL17Q6TDP4 642 aa12.73□□□□□ -0.37
COMMD4-225ENST00000569245 CREB3L2Q70SY1 520 aa12.73□□□□□ -0.37
COMMD4-225ENST00000569245 SSX8Q7RTT4 187 aa12.73□□□□□ -0.37
COMMD4-225ENST00000569245 TGIF2LYQ8IUE0 185 aa12.73□□□□□ -0.37
COMMD4-225ENST00000569245 KDM8Q8N371 416 aa12.73□□□□□ -0.37
COMMD4-225ENST00000569245 ZIC4Q8N9L1 334 aa12.73□□□□□ -0.37
COMMD4-225ENST00000569245 OR6S1Q8NH40 331 aa12.73□□□□□ -0.37
COMMD4-225ENST00000569245 OR52N5Q8NH56 324 aa12.73□□□□□ -0.37
COMMD4-225ENST00000569245 AKAP1Q92667 903 aaKnown RBP eCLIP12.73□□□□□ -0.37
COMMD4-225ENST00000569245 TAAR8Q969N4 342 aa12.73□□□□□ -0.37
COMMD4-225ENST00000569245 TMEM45BQ96B21 275 aa12.73□□□□□ -0.37
COMMD4-225ENST00000569245 SGTBQ96EQ0 304 aa12.73□□□□□ -0.37
COMMD4-225ENST00000569245 PTDSS2Q9BVG9 487 aa12.73□□□□□ -0.37
COMMD4-225ENST00000569245 GABARAPL3Q9BY60 117 aa12.73□□□□□ -0.37
COMMD4-225ENST00000569245 SLC7A10Q9NS82 523 aa12.73□□□□□ -0.37
COMMD4-225ENST00000569245 REV1Q9UBZ9 1251 aa12.73□□□□□ -0.37
COMMD4-225ENST00000569245 LRRC42Q9Y546 428 aa12.73□□□□□ -0.37
COMMD4-225ENST00000569245 PRRC2AP48634 2157 aaKnown RBP12.72□□□□□ -0.37
COMMD4-225ENST00000569245 A0A1W2PR80 420 aa12.72□□□□□ -0.37
COMMD4-225ENST00000569245 EFCAB9A8MZ26 197 aa12.72□□□□□ -0.37
COMMD4-225ENST00000569245 FTCDNL1E5RQL4 147 aa12.72□□□□□ -0.37
COMMD4-225ENST00000569245 E9PQ18 207 aa12.72□□□□□ -0.37
COMMD4-225ENST00000569245 HS3ST1O14792 307 aa12.72□□□□□ -0.37
COMMD4-225ENST00000569245 OSMP13725 252 aa12.72□□□□□ -0.37
COMMD4-225ENST00000569245 CD99P14209 185 aa12.72□□□□□ -0.37
COMMD4-225ENST00000569245 ZNF43P17038 809 aa12.72□□□□□ -0.37
COMMD4-225ENST00000569245 MAKP20794 623 aa12.72□□□□□ -0.37
COMMD4-225ENST00000569245 PTNP21246 168 aa12.72□□□□□ -0.37
COMMD4-225ENST00000569245 HOXC12P31275 282 aa12.72□□□□□ -0.37
COMMD4-225ENST00000569245 GPR4P46093 362 aa12.72□□□□□ -0.37
COMMD4-225ENST00000569245 SLC9A3P48764 834 aa12.72□□□□□ -0.37
COMMD4-225ENST00000569245 P2RY4P51582 365 aa12.72□□□□□ -0.37
COMMD4-225ENST00000569245 ESRRGP62508 458 aa12.72□□□□□ -0.37
COMMD4-225ENST00000569245 NKX6-1P78426 367 aaPredicted RBP12.72□□□□□ -0.37
COMMD4-225ENST00000569245 BSPH1Q075Z2 132 aa12.72□□□□□ -0.37
COMMD4-225ENST00000569245 ZNF74Q16587 644 aa12.72□□□□□ -0.37
COMMD4-225ENST00000569245 FAM69AQ5T7M9 428 aa12.72□□□□□ -0.37
COMMD4-225ENST00000569245 NIPAL3Q6P499 406 aa12.72□□□□□ -0.37
COMMD4-225ENST00000569245 RASSF6Q6ZTQ3 369 aa12.72□□□□□ -0.37
COMMD4-225ENST00000569245 SLC46A3Q7Z3Q1 461 aa12.72□□□□□ -0.37
COMMD4-225ENST00000569245 CLDN22Q8N7P3 220 aa12.72□□□□□ -0.37
COMMD4-225ENST00000569245 POMGNT2Q8NAT1 580 aa12.72□□□□□ -0.37
COMMD4-225ENST00000569245 TFAP2CQ92754 450 aa12.72□□□□□ -0.37
COMMD4-225ENST00000569245 MBOAT4Q96T53 435 aa12.72□□□□□ -0.37
COMMD4-225ENST00000569245 TMEM204Q9BSN7 226 aa12.72□□□□□ -0.37
COMMD4-225ENST00000569245 ADI1Q9BV57 179 aa12.72□□□□□ -0.37
COMMD4-225ENST00000569245 SLCO5A1Q9H2Y9 848 aa12.72□□□□□ -0.37
COMMD4-225ENST00000569245 TOR3AQ9H497 397 aa12.72□□□□□ -0.37
COMMD4-225ENST00000569245 RAB26Q9ULW5 256 aa12.72□□□□□ -0.37
COMMD4-225ENST00000569245 DPRXA6NFQ7 191 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 UNC119BA6NIH7 251 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 H0YAE9 185 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 M0R082 166 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 CDC42EP2O14613 210 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 SLC16A6O15403 523 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 ARHGEF9O43307 516 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 FZD7O75084 574 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 PTP4A3O75365 173 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 OR7A10O76100 309 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 MT-ATP6P00846 226 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 BGLAPP02818 100 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 TP53P04637 393 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms