RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 GRHPRQ9UBQ7 328 aa13.17□□□□□ -0.3
RNF4-210ENST00000508235 POFUT2Q9Y2G5 429 aa13.17□□□□□ -0.3
RNF4-210ENST00000508235 ANKHD1Q8IWZ3 2542 aaKnown RBP13.17□□□□□ -0.3
RNF4-210ENST00000508235 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.16□□□□□ -0.3
RNF4-210ENST00000508235 FKBP6O75344 327 aa13.16□□□□□ -0.3
RNF4-210ENST00000508235 PTP4A3O75365 173 aa13.16□□□□□ -0.3
RNF4-210ENST00000508235 TRMUO75648 421 aaKnown RBP13.16□□□□□ -0.3
RNF4-210ENST00000508235 CD14P08571 375 aa13.16□□□□□ -0.3
RNF4-210ENST00000508235 UBE2NP61088 152 aaKnown RBP13.16□□□□□ -0.3
RNF4-210ENST00000508235 ARF1P84077 181 aaKnown RBP13.16□□□□□ -0.3
RNF4-210ENST00000508235 TOP3AQ13472 1001 aaPredicted RBP13.16□□□□□ -0.3
RNF4-210ENST00000508235 FHL1Q13642 323 aa13.16□□□□□ -0.3
RNF4-210ENST00000508235 TBRG1Q3YBR2 411 aa13.16□□□□□ -0.3
RNF4-210ENST00000508235 ARMC4Q5T2S8 1044 aa13.16□□□□□ -0.3
RNF4-210ENST00000508235 RPL13AP3Q6NVV1 102 aa13.16□□□□□ -0.3
RNF4-210ENST00000508235 SMARCD3Q6STE5 483 aa13.16□□□□□ -0.3
RNF4-210ENST00000508235 ZER1Q7Z7L7 766 aa13.16□□□□□ -0.3
RNF4-210ENST00000508235 PIAS4Q8N2W9 510 aaPredicted RBP13.16□□□□□ -0.3
RNF4-210ENST00000508235 PAPD5Q8NDF8 572 aaKnown RBP13.16□□□□□ -0.3
RNF4-210ENST00000508235 NOXO1Q8NFA2 376 aa13.16□□□□□ -0.3
RNF4-210ENST00000508235 GPX7Q96SL4 187 aaPredicted RBP13.16□□□□□ -0.3
RNF4-210ENST00000508235 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.16□□□□□ -0.3
RNF4-210ENST00000508235 SLC25A15Q9Y619 301 aa13.16□□□□□ -0.3
RNF4-210ENST00000508235 ADGRG4Q8IZF6 3080 aa13.16□□□□□ -0.3
RNF4-210ENST00000508235 ARPC4-TTLL3A0A0A6YYG9 625 aa13.15□□□□□ -0.3
RNF4-210ENST00000508235 ACVR1BP36896 505 aa13.15□□□□□ -0.3
RNF4-210ENST00000508235 GSSP48637 474 aa13.15□□□□□ -0.3
RNF4-210ENST00000508235 ZNF84P51523 738 aa13.15□□□□□ -0.3
RNF4-210ENST00000508235 RPS6KA3P51812 740 aa13.15□□□□□ -0.3
RNF4-210ENST00000508235 ARHGDIAP52565 204 aa13.15□□□□□ -0.3
RNF4-210ENST00000508235 TSPAN31Q12999 210 aa13.15□□□□□ -0.3
RNF4-210ENST00000508235 HIST3H3Q16695 136 aa13.15□□□□□ -0.3
RNF4-210ENST00000508235 MICAQ29983 383 aa13.15□□□□□ -0.3
RNF4-210ENST00000508235 PHYHD1Q5SRE7 291 aa13.15□□□□□ -0.3
RNF4-210ENST00000508235 GPR139Q6DWJ6 353 aa13.15□□□□□ -0.3
RNF4-210ENST00000508235 PGBD2Q6P3X8 592 aa13.15□□□□□ -0.3
RNF4-210ENST00000508235 TMEM108Q6UXF1 575 aa13.15□□□□□ -0.3
RNF4-210ENST00000508235 DPY19L2P2Q6ZN68 376 aa13.15□□□□□ -0.3
RNF4-210ENST00000508235 ZNF627Q7L945 461 aa13.15□□□□□ -0.3
RNF4-210ENST00000508235 IGFN1Q86VF2 1251 aa13.15□□□□□ -0.3
RNF4-210ENST00000508235 FANK1Q8TC84 345 aa13.15□□□□□ -0.3
RNF4-210ENST00000508235 BCL2L2Q92843 193 aaPredicted RBP13.15□□□□□ -0.3
RNF4-210ENST00000508235 PLPPR2Q96GM1 343 aa13.15□□□□□ -0.3
RNF4-210ENST00000508235 LURAP1Q96LR2 239 aa13.15□□□□□ -0.3
RNF4-210ENST00000508235 FOXB1Q99853 325 aa13.15□□□□□ -0.3
RNF4-210ENST00000508235 ALG12Q9BV10 488 aa13.15□□□□□ -0.3
RNF4-210ENST00000508235 KATNB1Q9BVA0 655 aa13.15□□□□□ -0.3
RNF4-210ENST00000508235 MRPL13Q9BYD1 178 aaKnown RBP13.15□□□□□ -0.3
RNF4-210ENST00000508235 SMURF2Q9HAU4 748 aa13.15□□□□□ -0.3
RNF4-210ENST00000508235 ZNF346Q9UL40 294 aaKnown RBP13.15□□□□□ -0.3
RNF4-210ENST00000508235 U3KQV3 271 aa13.15□□□□□ -0.3
RNF4-210ENST00000508235 ARRDC5A6NEK1 342 aa13.14□□□□□ -0.31
RNF4-210ENST00000508235 XKRYO14609 159 aa13.14□□□□□ -0.31
RNF4-210ENST00000508235 DHHO43323 396 aa13.14□□□□□ -0.31
RNF4-210ENST00000508235 AHCYL1O43865 530 aa13.14□□□□□ -0.31
RNF4-210ENST00000508235 MGRN1O60291 552 aa13.14□□□□□ -0.31
RNF4-210ENST00000508235 E2F6O75461 281 aa13.14□□□□□ -0.31
RNF4-210ENST00000508235 CD3EP07766 207 aa13.14□□□□□ -0.31
RNF4-210ENST00000508235 QDPRP09417 244 aa13.14□□□□□ -0.31
RNF4-210ENST00000508235 APEHP13798 732 aaKnown RBP13.14□□□□□ -0.31
RNF4-210ENST00000508235 GSTM3P21266 225 aa13.14□□□□□ -0.31
RNF4-210ENST00000508235 SLC6A6P31641 620 aa13.14□□□□□ -0.31
RNF4-210ENST00000508235 ERVK-25P63136 954 aa13.14□□□□□ -0.31
RNF4-210ENST00000508235 NRN1LQ496H8 165 aa13.14□□□□□ -0.31
RNF4-210ENST00000508235 HIKESHIQ53FT3 197 aa13.14□□□□□ -0.31
RNF4-210ENST00000508235 THEM4Q5T1C6 240 aa13.14□□□□□ -0.31
RNF4-210ENST00000508235 NCMAPQ5T1S8 102 aa13.14□□□□□ -0.31
RNF4-210ENST00000508235 YTHDF3Q7Z739 585 aaKnown RBP13.14□□□□□ -0.31
RNF4-210ENST00000508235 CDC20BQ86Y33 519 aa13.14□□□□□ -0.31
RNF4-210ENST00000508235 ARIH2OSQ8N7S6 290 aa13.14□□□□□ -0.31
RNF4-210ENST00000508235 WDR31Q8NA23 367 aa13.14□□□□□ -0.31
RNF4-210ENST00000508235 AQP11Q8NBQ7 271 aa13.14□□□□□ -0.31
RNF4-210ENST00000508235 ZNF519Q8TB69 540 aa13.14□□□□□ -0.31
RNF4-210ENST00000508235 NANOS1Q8WY41 292 aaKnown RBP13.14□□□□□ -0.31
RNF4-210ENST00000508235 MCHR2Q969V1 340 aa13.14□□□□□ -0.31
RNF4-210ENST00000508235 ZNF570Q96NI8 536 aa13.14□□□□□ -0.31
RNF4-210ENST00000508235 TSPAN32Q96QS1 320 aa13.14□□□□□ -0.31
RNF4-210ENST00000508235 RBP7Q96R05 134 aa13.14□□□□□ -0.31
RNF4-210ENST00000508235 OR52D1Q9H346 318 aa13.14□□□□□ -0.31
RNF4-210ENST00000508235 NRIP3Q9NQ35 241 aa13.14□□□□□ -0.31
RNF4-210ENST00000508235 DNAJB9Q9UBS3 223 aa13.14□□□□□ -0.31
RNF4-210ENST00000508235 MGAT4BQ9UQ53 548 aa13.14□□□□□ -0.31
RNF4-210ENST00000508235 ALPK2Q86TB3 2170 aa13.13□□□□□ -0.31
RNF4-210ENST00000508235 A0A096LPE4 126 aa13.13□□□□□ -0.31
RNF4-210ENST00000508235 A0A1W2PPZ6 126 aa13.13□□□□□ -0.31
RNF4-210ENST00000508235 A0A1W2PR80 420 aa13.13□□□□□ -0.31
RNF4-210ENST00000508235 SIAH2O43255 324 aa13.13□□□□□ -0.31
RNF4-210ENST00000508235 DEAF1O75398 565 aaPredicted RBP13.13□□□□□ -0.31
RNF4-210ENST00000508235 FARS2O95363 451 aaKnown RBP13.13□□□□□ -0.31
RNF4-210ENST00000508235 PTAFRP25105 342 aa13.13□□□□□ -0.31
RNF4-210ENST00000508235 SDHAP31040 664 aa13.13□□□□□ -0.31
RNF4-210ENST00000508235 ERFP50548 548 aa13.13□□□□□ -0.31
RNF4-210ENST00000508235 ZNF133P52736 654 aaPredicted RBP13.13□□□□□ -0.31
RNF4-210ENST00000508235 RUNX1T1Q06455 604 aa13.13□□□□□ -0.31
RNF4-210ENST00000508235 CD47Q08722 323 aa13.13□□□□□ -0.31
RNF4-210ENST00000508235 RFX4Q33E94 735 aa13.13□□□□□ -0.31
RNF4-210ENST00000508235 ZNF770Q6IQ21 691 aaPredicted RBP13.13□□□□□ -0.31
RNF4-210ENST00000508235 LRFN4Q6PJG9 635 aa13.13□□□□□ -0.31
RNF4-210ENST00000508235 SEZ6L2Q6UXD5 910 aa13.13□□□□□ -0.31
RNF4-210ENST00000508235 ZNF813Q6ZN06 617 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms