RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 OR6Y1Q8NGX8 325 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 CLHC1Q8NHS4 586 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 VANGL1Q8TAA9 524 aaPredicted RBP5.24□□□□□ -1.57
HDAC3-206ENST00000471968 ZNF420Q8TAQ5 688 aaPredicted RBP5.24□□□□□ -1.57
HDAC3-206ENST00000471968 UBTD2Q8WUN7 234 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 ANKRD49Q8WVL7 239 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 TMEM234Q8WY98 164 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 EXT2Q93063 718 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 EBPLQ9BY08 206 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 SHCBP1LQ9BZQ2 653 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 PPP1R3EQ9H7J1 279 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 SLC35C2Q9NQQ7 365 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 ZNF224Q9NZL3 707 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 CD274Q9NZQ7 290 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 ONECUT1Q9UBC0 465 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 DTNAQ9Y4J8 743 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 TTC36A6NLP5 189 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 ZNF264O43296 627 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 FCMRO60667 390 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 NKX2-2O95096 273 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 MFN2O95140 757 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 BRI3O95415 125 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 IL3P08700 152 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 UBL4AP11441 157 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 B4GALT1P15291 398 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 LCN1P31025 176 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 CETN2P41208 172 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 APOBEC1P41238 236 aaKnown RBP5.23□□□□□ -1.57
HDAC3-206ENST00000471968 CLK1P49759 484 aaKnown RBP5.23□□□□□ -1.57
HDAC3-206ENST00000471968 NPY4RP50391 375 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 AQP5P55064 265 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 UBASH3AP57075 661 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 UBE2HP62256 183 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 ZBED6P86452 979 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 SELPLGQ14242 412 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 ZNF718Q3SXZ3 478 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 VPS26BQ4G0F5 336 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 KLHL26Q53HC5 615 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 SERTAD4-AS1Q5TG53 156 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 FAM45BPQ6NSW5 357 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 TMEM65Q6PI78 240 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 CEMP1Q6PRD7 247 aaPredicted RBP5.23□□□□□ -1.57
HDAC3-206ENST00000471968 METAP1DQ6UB28 335 aaPredicted RBP5.23□□□□□ -1.57
HDAC3-206ENST00000471968 ZNF813Q6ZN06 617 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 DCDC5Q6ZRR9 648 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 RBM43Q6ZSC3 357 aaKnown RBP5.23□□□□□ -1.57
HDAC3-206ENST00000471968 CBLL1Q75N03 491 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 METTL4Q8N3J2 472 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 CCDC89Q8N998 374 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 OR2Z1Q8NG97 314 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 OR52H1Q8NGJ2 320 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 FAM45AQ8TCE6 357 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 OTUB1Q96FW1 271 aaPredicted RBP5.23□□□□□ -1.57
HDAC3-206ENST00000471968 ZNF382Q96SR6 550 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 PTDSS2Q9BVG9 487 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 CCDC106Q9BWC9 280 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 MMADHCQ9H3L0 296 aaPredicted RBP5.23□□□□□ -1.57
HDAC3-206ENST00000471968 PIF1Q9H611 641 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 GCM1Q9NP62 436 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 ACER3Q9NUN7 267 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 PAK5Q9P286 719 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 CTSZQ9UBR2 303 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 FBXL3Q9UKT7 428 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.23□□□□□ -1.57
HDAC3-206ENST00000471968 KPTNQ9Y664 436 aa5.23□□□□□ -1.57
HDAC3-206ENST00000471968 TCRBV7S3A2A0A539 114 aa5.22□□□□□ -1.57
HDAC3-206ENST00000471968 C16orf90A8MZG2 172 aa5.22□□□□□ -1.57
HDAC3-206ENST00000471968 K7EPI3 171 aa5.22□□□□□ -1.57
HDAC3-206ENST00000471968 M0R3G1 203 aa5.22□□□□□ -1.57
HDAC3-206ENST00000471968 EIF4E2O60573 245 aaKnown RBP5.22□□□□□ -1.57
HDAC3-206ENST00000471968 GLRA3O75311 464 aa5.22□□□□□ -1.57
HDAC3-206ENST00000471968 UBL3O95164 117 aa5.22□□□□□ -1.57
HDAC3-206ENST00000471968 S100BP04271 92 aaPredicted RBP5.22□□□□□ -1.57
HDAC3-206ENST00000471968 ACP2P11117 423 aa5.22□□□□□ -1.57
HDAC3-206ENST00000471968 GP9P14770 177 aa5.22□□□□□ -1.57
HDAC3-206ENST00000471968 ETS2P15036 469 aa5.22□□□□□ -1.57
HDAC3-206ENST00000471968 PSMB10P40306 273 aa5.22□□□□□ -1.57
HDAC3-206ENST00000471968 SERPINB4P48594 390 aa5.22□□□□□ -1.57
HDAC3-206ENST00000471968 CLDN17P56750 224 aa5.22□□□□□ -1.57
HDAC3-206ENST00000471968 RPL23AP62750 156 aaKnown RBP5.22□□□□□ -1.57
HDAC3-206ENST00000471968 TCEAL1Q15170 157 aa5.22□□□□□ -1.57
HDAC3-206ENST00000471968 LIPJQ5W064 366 aa5.22□□□□□ -1.57
HDAC3-206ENST00000471968 PLBD1Q6P4A8 553 aa5.22□□□□□ -1.57
HDAC3-206ENST00000471968 LRFN4Q6PJG9 635 aa5.22□□□□□ -1.57
HDAC3-206ENST00000471968 OR2W3Q7Z3T1 314 aa5.22□□□□□ -1.57
HDAC3-206ENST00000471968 EPHX4Q8IUS5 362 aa5.22□□□□□ -1.57
HDAC3-206ENST00000471968 COX18Q8N8Q8 333 aa5.22□□□□□ -1.57
HDAC3-206ENST00000471968 C19orf18Q8NEA5 215 aa5.22□□□□□ -1.57
HDAC3-206ENST00000471968 KLHL30-AS1Q8NEE0 82 aa5.22□□□□□ -1.57
HDAC3-206ENST00000471968 PIFOQ8TCI5 191 aa5.22□□□□□ -1.57
HDAC3-206ENST00000471968 ELP4Q96EB1 424 aa5.22□□□□□ -1.57
HDAC3-206ENST00000471968 MAGEB18Q96M61 343 aa5.22□□□□□ -1.57
HDAC3-206ENST00000471968 PRPF18Q99633 342 aaKnown RBP5.22□□□□□ -1.57
HDAC3-206ENST00000471968 SMURF1Q9HCE7 757 aa5.22□□□□□ -1.57
HDAC3-206ENST00000471968 C19orf73Q9NVV2 129 aa5.22□□□□□ -1.57
HDAC3-206ENST00000471968 ERVK-18Q9QC07 812 aa5.22□□□□□ -1.57
HDAC3-206ENST00000471968 OPTCQ9UBM4 332 aa5.22□□□□□ -1.57
HDAC3-206ENST00000471968 RNF14Q9UBS8 474 aa5.22□□□□□ -1.57
HDAC3-206ENST00000471968 CGGBP1Q9UFW8 167 aaPredicted RBP5.22□□□□□ -1.57
HDAC3-206ENST00000471968 TBK1Q9UHD2 729 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms