RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 OR4K15Q8NH41 348 aa13.55□□□□□ -0.24
PTPRU-205ENST00000460170 MAFIPQ8WZ33 124 aa13.55□□□□□ -0.24
PTPRU-205ENST00000460170 NICN1Q9BSH3 213 aa13.55□□□□□ -0.24
PTPRU-205ENST00000460170 SLCO5A1Q9H2Y9 848 aa13.55□□□□□ -0.24
PTPRU-205ENST00000460170 LOC100289279A0A1B0GTE1 492 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 DOK2O60496 412 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 CISD3P0C7P0 127 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 IFNGR1P15260 489 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 SOX18P35713 384 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 EIF4EBP2Q13542 120 aaPredicted RBP13.54□□□□□ -0.24
PTPRU-205ENST00000460170 CREB3L2Q70SY1 520 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 ZSCAN1Q8NBB4 408 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 RCBTB1Q8NDN9 531 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 KCNG3Q8TAE7 436 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 CSF3RQ99062 836 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 GPR55Q9Y2T6 319 aaPredicted RBP13.54□□□□□ -0.24
PTPRU-205ENST00000460170 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.54□□□□□ -0.24
PTPRU-205ENST00000460170 SIGLEC6O43699 453 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 ZNF14P17017 642 aaPredicted RBP13.54□□□□□ -0.24
PTPRU-205ENST00000460170 PPICP45877 212 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 SLC22A24Q8N4F4 322 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 PLPP7Q8NBV4 271 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 C16orf52Q8NHV5 167 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 RAB3CQ96E17 227 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 CNTNAP3BQ96NU0 1288 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 ACKR4Q9NPB9 350 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.54□□□□□ -0.24
PTPRU-205ENST00000460170 SMLR1H3BR10 107 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 CNOT4O95628 575 aaKnown RBP13.54□□□□□ -0.24
PTPRU-205ENST00000460170 UBBP0CG47 229 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 ATP1B3P54709 279 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 BTG2P78543 158 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 SF3B4Q15427 424 aaKnown RBP eCLIP13.54□□□□□ -0.246e-7■■■□□ 14.6
PTPRU-205ENST00000460170 ACTBL2Q562R1 376 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 DNAAF1Q8NEP3 725 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 FGF14Q92915 247 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 DOK1Q99704 481 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 SELENOIQ9C0D9 397 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 ENKD1Q9H0I2 346 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 KLHL13Q9P2N7 655 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 OR52A1Q9UKL2 312 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 KCNE3Q9Y6H6 103 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 A0A1B0GV50 99 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 GABARAPH6UMI1 98 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 CCR5P51681 352 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 H1FNTQ75WM6 255 aaPredicted RBP13.54□□□□□ -0.24
PTPRU-205ENST00000460170 MED18Q9BUE0 208 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 SDHAP31040 664 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 ETV6P41212 452 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 TGM4P49221 684 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 MECP2P51608 486 aaKnown RBP13.54□□□□□ -0.24
PTPRU-205ENST00000460170 TAS2R46P59540 309 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 Q6ZTK2 550 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 OR1J4Q8NGS1 313 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 NT5CQ8TCD5 201 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 PLA2G12AQ9BZM1 189 aa13.54□□□□□ -0.24
PTPRU-205ENST00000460170 MRPS28Q9Y2Q9 187 aaKnown RBP13.54□□□□□ -0.24
PTPRU-205ENST00000460170 A0A0D9SG52 128 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 DBHP09172 617 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 PPP3CBP16298 524 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 P2RX1P51575 399 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 HTR4Q13639 388 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 RFPL4BQ6ZWI9 263 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 LRRC18Q8N456 261 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 NKAIN3Q8N8D7 197 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 FBXL2Q9UKC9 423 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 NXT1Q9UKK6 140 aaKnown RBP13.53□□□□□ -0.24
PTPRU-205ENST00000460170 TMPRSS11EQ9UL52 423 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 A6NCN8 305 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 HOXB5P09067 269 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 CSF3P09919 207 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 APLNRP35414 380 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 RPS27AP62979 156 aaKnown RBP13.53□□□□□ -0.24
PTPRU-205ENST00000460170 UBA52P62987 128 aaKnown RBP13.53□□□□□ -0.24
PTPRU-205ENST00000460170 AGERQ15109 404 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 BEX5Q5H9J7 111 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 ALKAL2Q6UX46 152 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 DCXRQ7Z4W1 244 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 KDM8Q8N371 416 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 ZFAND1Q8TCF1 268 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 STK35Q8TDR2 534 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 FGGYQ96C11 551 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 EMC3Q9P0I2 261 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 COA3Q9Y2R0 106 aaPredicted RBP13.53□□□□□ -0.24
PTPRU-205ENST00000460170 WIF1Q9Y5W5 379 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 ALOX12BO75342 701 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 CER1O95813 267 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 RAF1P04049 648 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 CALCBP10092 127 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 DPP4P27487 766 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 EIF1P41567 113 aaKnown RBP13.53□□□□□ -0.24
PTPRU-205ENST00000460170 HMGA2P52926 109 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 RAB5BP61020 215 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 MEX3BQ6ZN04 569 aaKnown RBP13.53□□□□□ -0.24
PTPRU-205ENST00000460170 ZNF793Q6ZN11 406 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 ADGRE4PQ86SQ3 457 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 ZNF775Q96BV0 537 aaPredicted RBP13.53□□□□□ -0.24
PTPRU-205ENST00000460170 SLC19A3Q9BZV2 496 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 COPS3Q9UNS2 423 aa13.53□□□□□ -0.24
PTPRU-205ENST00000460170 XIRP1Q702N8 1843 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms