RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 GTDC1Q4AE62 458 aa15.37■□□□□ 0.05
CHCHD3-203ENST00000448878 PDCD4Q53EL6 469 aaKnown RBP15.37■□□□□ 0.05
CHCHD3-203ENST00000448878 NXNQ6DKJ4 435 aa15.37■□□□□ 0.05
CHCHD3-203ENST00000448878 OGFOD2Q6N063 350 aa15.37■□□□□ 0.05
CHCHD3-203ENST00000448878 KIRREL3Q8IZU9 778 aa15.37■□□□□ 0.05
CHCHD3-203ENST00000448878 SLC30A7Q8NEW0 376 aa15.37■□□□□ 0.05
CHCHD3-203ENST00000448878 FGFBP3Q8TAT2 258 aa15.37■□□□□ 0.05
CHCHD3-203ENST00000448878 DNAJA4Q8WW22 397 aaPredicted RBP15.37■□□□□ 0.05
CHCHD3-203ENST00000448878 C11orf40Q8WZ69 217 aa15.37■□□□□ 0.05
CHCHD3-203ENST00000448878 RAB1CQ92928 201 aa15.37■□□□□ 0.05
CHCHD3-203ENST00000448878 EPYCQ99645 322 aa15.37■□□□□ 0.05
CHCHD3-203ENST00000448878 GAL3ST1Q99999 423 aa15.37■□□□□ 0.05
CHCHD3-203ENST00000448878 C1QTNF5Q9BXJ0 243 aa15.37■□□□□ 0.05
CHCHD3-203ENST00000448878 ROPN1BQ9BZX4 212 aaPredicted RBP15.37■□□□□ 0.05
CHCHD3-203ENST00000448878 ROPN1Q9HAT0 212 aaPredicted RBP15.37■□□□□ 0.05
CHCHD3-203ENST00000448878 C12orf10Q9HB07 376 aa15.37■□□□□ 0.05
CHCHD3-203ENST00000448878 THUMPD1Q9NXG2 353 aaKnown RBP15.37■□□□□ 0.05
CHCHD3-203ENST00000448878 SLCO1C1Q9NYB5 712 aa15.37■□□□□ 0.05
CHCHD3-203ENST00000448878 UBAP1Q9NZ09 502 aa15.37■□□□□ 0.05
CHCHD3-203ENST00000448878 KLHL14Q9P2G3 628 aa15.37■□□□□ 0.05
CHCHD3-203ENST00000448878 SLC22A23A1A5C7 686 aa15.36■□□□□ 0.05
CHCHD3-203ENST00000448878 C11orf98E9PRG8 122 aa15.36■□□□□ 0.05
CHCHD3-203ENST00000448878 BIRC5O15392 142 aa15.36■□□□□ 0.05
CHCHD3-203ENST00000448878 IGHV2-5P01817 119 aa15.36■□□□□ 0.05
CHCHD3-203ENST00000448878 IL6P05231 212 aa15.36■□□□□ 0.05
CHCHD3-203ENST00000448878 ARAFP10398 606 aa15.36■□□□□ 0.05
CHCHD3-203ENST00000448878 ERVS71-1P61550 626 aa15.36■□□□□ 0.05
CHCHD3-203ENST00000448878 GLO1Q04760 184 aa15.36■□□□□ 0.05
CHCHD3-203ENST00000448878 MMEL1Q495T6 779 aa15.36■□□□□ 0.05
CHCHD3-203ENST00000448878 C6orf10Q5SRN2 563 aa15.36■□□□□ 0.05
CHCHD3-203ENST00000448878 C6orf89Q6UWU4 347 aa15.36■□□□□ 0.05
CHCHD3-203ENST00000448878 TREML4Q6UXN2 200 aa15.36■□□□□ 0.05
CHCHD3-203ENST00000448878 ZNF627Q7L945 461 aa15.36■□□□□ 0.05
CHCHD3-203ENST00000448878 PIWIL3Q7Z3Z3 882 aaKnown RBP15.36■□□□□ 0.05
CHCHD3-203ENST00000448878 RETREG3Q86VR2 466 aa15.36■□□□□ 0.05
CHCHD3-203ENST00000448878 WDFY1Q8IWB7 410 aa15.36■□□□□ 0.05
CHCHD3-203ENST00000448878 SIGLECL1Q8N7X8 197 aa15.36■□□□□ 0.05
CHCHD3-203ENST00000448878 GLB1L3Q8NCI6 653 aaPredicted RBP15.36■□□□□ 0.05
CHCHD3-203ENST00000448878 ADPRHL1Q8NDY3 354 aa15.36■□□□□ 0.05
CHCHD3-203ENST00000448878 MAL2Q969L2 176 aa15.36■□□□□ 0.05
CHCHD3-203ENST00000448878 SH3GL3Q99963 347 aa15.36■□□□□ 0.05
CHCHD3-203ENST00000448878 PAIP2Q9BPZ3 127 aaKnown RBP15.36■□□□□ 0.05
CHCHD3-203ENST00000448878 WDR55Q9H6Y2 383 aaPredicted RBP15.36■□□□□ 0.05
CHCHD3-203ENST00000448878 RMND5AQ9H871 391 aa15.36■□□□□ 0.05
CHCHD3-203ENST00000448878 GPR45Q9Y5Y3 372 aa15.36■□□□□ 0.05
CHCHD3-203ENST00000448878 IGKV1D-42A0A075B6H8 117 aa15.35■□□□□ 0.05
CHCHD3-203ENST00000448878 SDHDO14521 159 aa15.35■□□□□ 0.05
CHCHD3-203ENST00000448878 DEAF1O75398 565 aaPredicted RBP15.35■□□□□ 0.05
CHCHD3-203ENST00000448878 SLC22A3O75751 556 aa15.35■□□□□ 0.05
CHCHD3-203ENST00000448878 OR6A2O95222 327 aa15.35■□□□□ 0.05
CHCHD3-203ENST00000448878 MT-ND5P03915 603 aa15.35■□□□□ 0.05
CHCHD3-203ENST00000448878 NUDT7P0C024 238 aa15.35■□□□□ 0.05
CHCHD3-203ENST00000448878 OR8G3PP0DMU2 310 aa15.35■□□□□ 0.05
CHCHD3-203ENST00000448878 GATA3P23771 443 aa15.35■□□□□ 0.05
CHCHD3-203ENST00000448878 HTR2AP28223 471 aa15.35■□□□□ 0.05
CHCHD3-203ENST00000448878 EPHA3P29320 983 aa15.35■□□□□ 0.05
CHCHD3-203ENST00000448878 BIDP55957 195 aa15.35■□□□□ 0.05
CHCHD3-203ENST00000448878 PUDPQ08623 228 aa15.35■□□□□ 0.05
CHCHD3-203ENST00000448878 TMEM53Q6P2H8 277 aa15.35■□□□□ 0.05
CHCHD3-203ENST00000448878 ULK3Q6PHR2 472 aa15.35■□□□□ 0.05
CHCHD3-203ENST00000448878 ZNF584Q8IVC4 421 aa15.35■□□□□ 0.05
CHCHD3-203ENST00000448878 SLC22A24Q8N4F4 322 aa15.35■□□□□ 0.05
CHCHD3-203ENST00000448878 BBS10Q8TAM1 723 aa15.35■□□□□ 0.05
CHCHD3-203ENST00000448878 ST7LQ8TDW4 575 aa15.35■□□□□ 0.05
CHCHD3-203ENST00000448878 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.35■□□□□ 0.056e-6■■■■■ 28.1
CHCHD3-203ENST00000448878 CCL17Q92583 94 aa15.35■□□□□ 0.05
CHCHD3-203ENST00000448878 SLC47A1Q96FL8 570 aa15.35■□□□□ 0.05
CHCHD3-203ENST00000448878 ITCHQ96J02 903 aa15.35■□□□□ 0.05
CHCHD3-203ENST00000448878 SAP30LQ9HAJ7 183 aa15.35■□□□□ 0.05
CHCHD3-203ENST00000448878 TMEM27Q9HBJ8 222 aa15.35■□□□□ 0.05
CHCHD3-203ENST00000448878 CACNG2Q9Y698 323 aa15.35■□□□□ 0.05
CHCHD3-203ENST00000448878 MGAM2Q2M2H8 2515 aa15.35■□□□□ 0.05
CHCHD3-203ENST00000448878 LRRN3E7EW58 273 aa15.34■□□□□ 0.05
CHCHD3-203ENST00000448878 FARS2O95363 451 aaKnown RBP15.34■□□□□ 0.05
CHCHD3-203ENST00000448878 ADORA3P0DMS8 318 aa15.34■□□□□ 0.05
CHCHD3-203ENST00000448878 KITP10721 976 aa15.34■□□□□ 0.05
CHCHD3-203ENST00000448878 MOGQ16653 247 aa15.34■□□□□ 0.05
CHCHD3-203ENST00000448878 TBC1D28Q2M2D7 210 aa15.34■□□□□ 0.05
CHCHD3-203ENST00000448878 MIDNQ504T8 468 aa15.34■□□□□ 0.05
CHCHD3-203ENST00000448878 PAQR4Q8N4S7 273 aaPredicted RBP15.34■□□□□ 0.05
CHCHD3-203ENST00000448878 LSMEM1Q8N8F7 131 aa15.34■□□□□ 0.05
CHCHD3-203ENST00000448878 SCAIQ8N9R8 606 aa15.34■□□□□ 0.05
CHCHD3-203ENST00000448878 ZNF519Q8TB69 540 aa15.34■□□□□ 0.05
CHCHD3-203ENST00000448878 GTF3AQ92664 365 aaKnown RBP15.34■□□□□ 0.05
CHCHD3-203ENST00000448878 SLC35B4Q969S0 331 aa15.34■□□□□ 0.05
CHCHD3-203ENST00000448878 VPS33AQ96AX1 596 aa15.34■□□□□ 0.05
CHCHD3-203ENST00000448878 SLC41A3Q96GZ6 507 aa15.34■□□□□ 0.05
CHCHD3-203ENST00000448878 MOGAT1Q96PD6 335 aa15.34■□□□□ 0.05
CHCHD3-203ENST00000448878 UNKLQ9H9P5 680 aaKnown RBP15.34■□□□□ 0.05
CHCHD3-203ENST00000448878 SPRY3O43610 288 aa15.33■□□□□ 0.04
CHCHD3-203ENST00000448878 FZD7O75084 574 aa15.33■□□□□ 0.04
CHCHD3-203ENST00000448878 ENTPD5O75356 428 aa15.33■□□□□ 0.04
CHCHD3-203ENST00000448878 BGLAPP02818 100 aa15.33■□□□□ 0.04
CHCHD3-203ENST00000448878 ZCCHC18P0CG32 403 aa15.33■□□□□ 0.04
CHCHD3-203ENST00000448878 CCNOP22674 350 aa15.33■□□□□ 0.04
CHCHD3-203ENST00000448878 RGNQ15493 299 aa15.33■□□□□ 0.04
CHCHD3-203ENST00000448878 ARMCX4Q5H9R4 360 aa15.33■□□□□ 0.04
CHCHD3-203ENST00000448878 CEP85LQ5SZL2 805 aa15.33■□□□□ 0.04
CHCHD3-203ENST00000448878 PXKQ7Z7A4 578 aa15.33■□□□□ 0.04
CHCHD3-203ENST00000448878 OR1J2Q8NGS2 313 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms