RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 SLC22A31A6NKX4 558 aa15.35■□□□□ 0.05
PMS1-213ENST00000441310 H7BY64 318 aa15.35■□□□□ 0.05
PMS1-213ENST00000441310 CD63P08962 238 aa15.35■□□□□ 0.05
PMS1-213ENST00000441310 GTF2F2P13984 249 aa15.35■□□□□ 0.05
PMS1-213ENST00000441310 TEAD1P28347 426 aa15.35■□□□□ 0.05
PMS1-213ENST00000441310 RPS11P62280 158 aaKnown RBP eCLIP15.35■□□□□ 0.05
PMS1-213ENST00000441310 CST6Q15828 149 aa15.35■□□□□ 0.05
PMS1-213ENST00000441310 GFOD2Q3B7J2 385 aa15.35■□□□□ 0.05
PMS1-213ENST00000441310 NDUFAF7Q7L592 441 aa15.35■□□□□ 0.05
PMS1-213ENST00000441310 SLC29A4Q7RTT9 530 aa15.35■□□□□ 0.05
PMS1-213ENST00000441310 OR51L1Q8NGJ5 315 aa15.35■□□□□ 0.05
PMS1-213ENST00000441310 MRPL38Q96DV4 380 aaKnown RBP15.35■□□□□ 0.05
PMS1-213ENST00000441310 PRAP1Q96NZ9 151 aa15.35■□□□□ 0.05
PMS1-213ENST00000441310 POFUT1Q9H488 388 aa15.35■□□□□ 0.05
PMS1-213ENST00000441310 ASH2LQ9UBL3 628 aa15.35■□□□□ 0.05
PMS1-213ENST00000441310 FBXO4Q9UKT5 387 aa15.35■□□□□ 0.05
PMS1-213ENST00000441310 RNF222A6NCQ9 220 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 PIN1P1O15428 100 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 OR2F2O95006 317 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 BMP7P18075 431 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 PSMD4P55036 377 aaKnown RBP15.34■□□□□ 0.05
PMS1-213ENST00000441310 PCBP4P57723 403 aaKnown RBP15.34■□□□□ 0.05
PMS1-213ENST00000441310 DPTQ07507 201 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 PLA2G7Q13093 441 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 OR2F1Q13607 317 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 CDK5R1Q15078 307 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 RAD51AP1Q96B01 352 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 SMIM19Q96E16 107 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 PELI1Q96FA3 418 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 PHYHIPLQ96FC7 376 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 SLC41A3Q96GZ6 507 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 MACROD1Q9BQ69 325 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 SEC11CQ9BY50 192 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 SLITRK2Q9H156 845 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 EPHX3Q9H6B9 360 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 ATXN7L1Q9ULK2 861 aaPredicted RBP15.34■□□□□ 0.05
PMS1-213ENST00000441310 HEATR5BQ9P2D3 2071 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 MUC1P15941 1255 aaPredicted RBP15.34■□□□□ 0.05
PMS1-213ENST00000441310 TMEM52BQ4KMG9 183 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 TMEM200AQ86VY9 491 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 STX12Q86Y82 276 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 OR14C36Q8NHC7 312 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 TMEM41AQ96HV5 264 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 SGPP1Q9BX95 441 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 INPP5EQ9NRR6 644 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 UFSP2Q9NUQ7 469 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 GDE1Q9NZC3 331 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 GNG8Q9UK08 70 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 SLC7A7Q9UM01 511 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 SLC31A1O15431 190 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 LIPCP11150 499 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 NAA10P41227 235 aaPredicted RBP15.34■□□□□ 0.05
PMS1-213ENST00000441310 P2RY4P51582 365 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 AGERQ15109 404 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 AGBL4Q5VU57 503 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 OR52W1Q6IF63 320 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 C11orf87Q6NUJ2 197 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 MBOAT2Q6ZWT7 520 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 STOML3Q8TAV4 291 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 TCTEX1D2Q8WW35 142 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 C1QTNF2Q9BXJ5 285 aa15.34■□□□□ 0.05
PMS1-213ENST00000441310 ZNF879B4DU55 563 aa15.33■□□□□ 0.04
PMS1-213ENST00000441310 PPM1DO15297 605 aa15.33■□□□□ 0.04
PMS1-213ENST00000441310 KLF4O43474 513 aa15.33■□□□□ 0.04
PMS1-213ENST00000441310 HMGN2P05204 90 aaKnown RBP15.33■□□□□ 0.04
PMS1-213ENST00000441310 MNDAP41218 407 aa15.33■□□□□ 0.04
PMS1-213ENST00000441310 KHKP50053 298 aa15.33■□□□□ 0.04
PMS1-213ENST00000441310 F2RL1P55085 397 aa15.33■□□□□ 0.04
PMS1-213ENST00000441310 FXYD6P3P58550 94 aa15.33■□□□□ 0.04
PMS1-213ENST00000441310 DECR1Q16698 335 aa15.33■□□□□ 0.04
PMS1-213ENST00000441310 FIGNL1Q6PIW4 674 aa15.33■□□□□ 0.04
PMS1-213ENST00000441310 NUBPLQ8TB37 319 aa15.33■□□□□ 0.04
PMS1-213ENST00000441310 HIST1H2BAQ96A08 127 aa15.33■□□□□ 0.04
PMS1-213ENST00000441310 C3orf49Q96BT1 292 aa15.33■□□□□ 0.04
PMS1-213ENST00000441310 HAVCR1Q96D42 359 aa15.33■□□□□ 0.04
PMS1-213ENST00000441310 ZNF514Q96K75 400 aaPredicted RBP15.33■□□□□ 0.04
PMS1-213ENST00000441310 GLIPR2Q9H4G4 154 aa15.33■□□□□ 0.04
PMS1-213ENST00000441310 FAM86C2PA6NEL3 165 aa15.33■□□□□ 0.04
PMS1-213ENST00000441310 UNC119BA6NIH7 251 aa15.33■□□□□ 0.04
PMS1-213ENST00000441310 OR52A4PA6NMU1 304 aa15.33■□□□□ 0.04
PMS1-213ENST00000441310 PSMD9O00233 223 aa15.33■□□□□ 0.04
PMS1-213ENST00000441310 IMPA2O14732 288 aa15.33■□□□□ 0.04
PMS1-213ENST00000441310 GKN3PP0CG01 181 aa15.33■□□□□ 0.04
PMS1-213ENST00000441310 CPT2P23786 658 aa15.33■□□□□ 0.04
PMS1-213ENST00000441310 VASPP50552 380 aaPredicted RBP15.33■□□□□ 0.04
PMS1-213ENST00000441310 ATP1B3P54709 279 aa15.33■□□□□ 0.04
PMS1-213ENST00000441310 MRPS10P82664 201 aaKnown RBP15.33■□□□□ 0.04
PMS1-213ENST00000441310 CRMP1Q14194 572 aa15.33■□□□□ 0.04
PMS1-213ENST00000441310 TMEM31Q5JXX7 168 aa15.33■□□□□ 0.04
PMS1-213ENST00000441310 NCMAPQ5T1S8 102 aa15.33■□□□□ 0.04
PMS1-213ENST00000441310 MRM1Q6IN84 353 aaKnown RBP15.33■□□□□ 0.04
PMS1-213ENST00000441310 OR6N1Q8NGY5 312 aa15.33■□□□□ 0.04
PMS1-213ENST00000441310 ZMYND19Q96E35 227 aaPredicted RBP15.33■□□□□ 0.04
PMS1-213ENST00000441310 CMTM3Q96MX0 182 aa15.33■□□□□ 0.04
PMS1-213ENST00000441310 V9GY05 133 aa15.33■□□□□ 0.04
PMS1-213ENST00000441310 VEGFDO43915 354 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 FOLR2P14207 255 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 ZNF3P17036 446 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 CASRP41180 1078 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 SIRPAP78324 504 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms