RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 Q6ZTK2 550 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 PRICKLE2Q7Z3G6 844 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 OR1J2Q8NGS2 313 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 KCNG3Q8TAE7 436 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 PEX11GQ96HA9 241 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 OR11A1Q9GZK7 315 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 TAS2R5Q9NYW4 299 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 CD300LBA8K4G0 201 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 TGOLN2O43493 480 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 ITGB2P05107 769 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 ZNF43P17038 809 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 RFX2P48378 723 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 HTD2P86397 168 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 FRMD1Q8N878 549 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 PLEKHA3Q9HB20 300 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 MCCC2Q9HCC0 563 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 HRASLSQ9HDD0 168 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 KIR2DS5A0A0G2JLQ3 304 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 A0A0G2JNG1 304 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 KIR2DS3K7RE56 304 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 GPR75O95800 540 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 AIFM1O95831 613 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 HEXBP07686 556 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 PFN3P60673 137 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 UBE2IP63279 158 aaKnown RBP18.19■□□□□ 0.5
SHANK1-203ENST00000391813 SRPXP78539 464 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 KIR2DS5Q14953 304 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 UQCC3Q6UW78 93 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 DPY19L2P2Q6ZN68 376 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 ABHD12BQ7Z5M8 362 aaPredicted RBP18.19■□□□□ 0.5
SHANK1-203ENST00000391813 NKAIN3Q8N8D7 197 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 OR5L2Q8NGL0 311 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 ELSPBP1Q96BH3 223 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 WDR76Q9H967 626 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 HS3ST2Q9Y278 367 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 AIPO00170 330 aa18.18■□□□□ 0.5
SHANK1-203ENST00000391813 LPLP06858 475 aa18.18■□□□□ 0.5
SHANK1-203ENST00000391813 ECI1P42126 302 aa18.18■□□□□ 0.5
SHANK1-203ENST00000391813 ACY1Q03154 408 aa18.18■□□□□ 0.5
SHANK1-203ENST00000391813 OR2AK2Q8NG84 335 aa18.18■□□□□ 0.5
SHANK1-203ENST00000391813 EXOSC3Q9NQT5 275 aaKnown RBP18.18■□□□□ 0.5
SHANK1-203ENST00000391813 CBR1P16152 277 aa18.18■□□□□ 0.5
SHANK1-203ENST00000391813 IRS1P35568 1242 aa18.18■□□□□ 0.5
SHANK1-203ENST00000391813 MALLQ13021 153 aa18.18■□□□□ 0.5
SHANK1-203ENST00000391813 BPHLQ86WA6 291 aaPredicted RBP18.18■□□□□ 0.5
SHANK1-203ENST00000391813 SLC41A2Q96JW4 573 aa18.18■□□□□ 0.5
SHANK1-203ENST00000391813 AMDHD1Q96NU7 426 aa18.18■□□□□ 0.5
SHANK1-203ENST00000391813 NARFLQ9H6Q4 476 aa18.18■□□□□ 0.5
SHANK1-203ENST00000391813 SPHK1Q9NYA1 384 aa18.18■□□□□ 0.5
SHANK1-203ENST00000391813 CNTRLQ7Z7A1 2325 aa18.18■□□□□ 0.5
SHANK1-203ENST00000391813 PRR35P0CG20 571 aa18.18■□□□□ 0.5
SHANK1-203ENST00000391813 HLA-FP30511 346 aa18.18■□□□□ 0.5
SHANK1-203ENST00000391813 TAGLN2P37802 199 aaKnown RBP18.18■□□□□ 0.5
SHANK1-203ENST00000391813 NFATC4Q14934 902 aa18.18■□□□□ 0.5
SHANK1-203ENST00000391813 IAH1Q2TAA2 248 aaPredicted RBP18.18■□□□□ 0.5
SHANK1-203ENST00000391813 ADGRE4PQ86SQ3 457 aa18.18■□□□□ 0.5
SHANK1-203ENST00000391813 BBS1Q8NFJ9 593 aa18.18■□□□□ 0.5
SHANK1-203ENST00000391813 OR51Q1Q8NH59 317 aa18.18■□□□□ 0.5
SHANK1-203ENST00000391813 A0A087WUU8 490 aa18.18■□□□□ 0.5
SHANK1-203ENST00000391813 MAKP20794 623 aa18.18■□□□□ 0.5
SHANK1-203ENST00000391813 FGF9P31371 208 aaPredicted RBP18.18■□□□□ 0.5
SHANK1-203ENST00000391813 RAB1AP62820 205 aa18.18■□□□□ 0.5
SHANK1-203ENST00000391813 Q6ZSR6 202 aa18.18■□□□□ 0.5
SHANK1-203ENST00000391813 NUDT8Q8WV74 236 aa18.18■□□□□ 0.5
SHANK1-203ENST00000391813 RBMXL1Q96E39 390 aaKnown RBP18.18■□□□□ 0.5
SHANK1-203ENST00000391813 TMEM59Q9BXS4 323 aa18.18■□□□□ 0.5
SHANK1-203ENST00000391813 GLIPR2Q9H4G4 154 aa18.18■□□□□ 0.5
SHANK1-203ENST00000391813 C12orf10Q9HB07 376 aa18.18■□□□□ 0.5
SHANK1-203ENST00000391813 KCNIP1Q9NZI2 227 aa18.18■□□□□ 0.5
SHANK1-203ENST00000391813 SDK1Q7Z5N4 2213 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 LILRB5O75023 590 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 SLC6A11P48066 632 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 SSTP61278 116 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 TMEM64Q6YI46 380 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 TM4SF18Q96CE8 201 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 ZNF160Q9HCG1 818 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 RAB22AQ9UL26 194 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 CD38P28907 300 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 RPS15P62841 145 aaKnown RBP18.17■□□□□ 0.5
SHANK1-203ENST00000391813 PRSS36Q5K4E3 855 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 FAM160A2Q8N612 972 aaPredicted RBP18.17■□□□□ 0.5
SHANK1-203ENST00000391813 TTC9Q92623 222 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 TMEM68Q96MH6 324 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 POFUT1Q9H488 388 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 TAF9BQ9HBM6 251 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 OR5H14A6NHG9 310 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 M0QYG6 137 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 PTGER1P34995 402 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 RAD52P43351 418 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 YPEL5P62699 121 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 TTLL10Q6ZVT0 673 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 PARS2Q7L3T8 475 aaKnown RBP18.17■□□□□ 0.5
SHANK1-203ENST00000391813 PTOV1Q86YD1 416 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 METTL27Q8N6F8 245 aaPredicted RBP18.17■□□□□ 0.5
SHANK1-203ENST00000391813 SMIM4Q8WVI0 70 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 APH1BQ8WW43 257 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 SEMA4CQ9C0C4 833 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 SLCO2B1O94956 709 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 C1SP09871 688 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 PLGLB1Q02325 96 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms