RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 RAB36O95755 333 aa16.45■□□□□ 0.22
SNAPC3-207ENST00000610884 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.45■□□□□ 0.22
SNAPC3-207ENST00000610884 TOMM20Q15388 145 aa16.45■□□□□ 0.22
SNAPC3-207ENST00000610884 ZSWIM7Q19AV6 140 aa16.45■□□□□ 0.22
SNAPC3-207ENST00000610884 ARMC4Q5T2S8 1044 aa16.45■□□□□ 0.22
SNAPC3-207ENST00000610884 THOC7Q6I9Y2 204 aaKnown RBP16.45■□□□□ 0.22
SNAPC3-207ENST00000610884 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.45■□□□□ 0.22
SNAPC3-207ENST00000610884 OR10H4Q8NGA5 316 aa16.45■□□□□ 0.22
SNAPC3-207ENST00000610884 TRMT61AQ96FX7 289 aaKnown RBP16.45■□□□□ 0.22
SNAPC3-207ENST00000610884 PROK2Q9HC23 129 aa16.45■□□□□ 0.22
SNAPC3-207ENST00000610884 SNTG1Q9NSN8 517 aa16.45■□□□□ 0.22
SNAPC3-207ENST00000610884 A0A075B6Q4 140 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 POLR2HP52434 150 aaKnown RBP16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 SSPNQ14714 243 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 OR7A5Q15622 319 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 EXT1Q16394 746 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 C1orf140Q5VVS0 124 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 SPINK14Q6IE38 97 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 LEG1Q6P5S2 330 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 SSX6Q7RTT6 188 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 NANOGNBQ7Z5D8 188 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 ESX1Q8N693 406 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 NANOGP1Q8N7R0 232 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 OR6K6Q8NGW6 343 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 OR2B2Q9GZK3 357 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 NDEL1Q9GZM8 345 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 NPAP1Q9NZP6 1156 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 LSM2Q9Y333 95 aaKnown RBP16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 V9GYH0 126 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 CEP295Q9C0D2 2601 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 MYL12BO14950 172 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 RAD1O60671 282 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 SCG5P05408 212 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 HK1P19367 917 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 SSR4P51571 173 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 MRPS15P82914 257 aaKnown RBP16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 GPR50Q13585 617 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 MELKQ14680 651 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 TAB1Q15750 504 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 BAK1Q16611 211 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 SLC25A30Q5SVS4 291 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 MEPCEQ7L2J0 689 aaKnown RBP16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 GRINAQ7Z429 371 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 ZNF511Q8NB15 262 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 C7orf57Q8NEG2 295 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 ZNF417Q8TAU3 575 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 POC1BQ8TC44 478 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 ZNF587Q96SQ5 575 aaPredicted RBP16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 TMEM43Q9BTV4 400 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 RACGAP1Q9H0H5 632 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 NRIP3Q9NQ35 241 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 PLA2G3Q9NZ20 509 aa16.44■□□□□ 0.22
SNAPC3-207ENST00000610884 C12orf71A8MTZ7 269 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 H0YC42 278 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 TFECO14948 347 aaPredicted RBP16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 BGLAPP02818 100 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 HIST1H2ABP04908 130 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 HTR1FP30939 366 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 RPS4XP62701 263 aaKnown RBP16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 OC90Q02509 493 aaPredicted RBP16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 MXD1Q05195 221 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 HIST3H2AQ7L7L0 130 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 LSM14AQ8ND56 463 aaKnown RBP16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 NPEPL1Q8NDH3 523 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 M1APQ8TC57 530 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 SMPDL3BQ92485 455 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 HIST1H2ACQ93077 130 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 TSPAN32Q96QS1 320 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 SMAD5Q99717 465 aaKnown RBP16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 HPF1Q9NWY4 346 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 TNFRSF10DQ9UBN6 386 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 DIMT1Q9UNQ2 313 aaKnown RBP16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 TRAPPC4Q9Y296 219 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 DVL2O14641 736 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 RNF13O43567 381 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 ZNF3P17036 446 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 RFX2P48378 723 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 RUNX1T1Q06455 604 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 ZNF79Q15937 498 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 ZFP69Q49AA0 526 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 RPTNQ6XPR3 784 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 TMPRSS11AQ6ZMR5 421 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 LINC00696Q6ZRV3 163 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 ASCL5Q7RTU5 278 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 BEST3Q8N1M1 668 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 PSMF1Q92530 271 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 TM9SF2Q99805 663 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 ZPBPQ9BS86 351 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 HES7Q9BYE0 225 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 PRRG3Q9BZD7 231 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 TIGARQ9NQ88 270 aa16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 SPIN1Q9Y657 262 aaPredicted RBP16.43■□□□□ 0.22
SNAPC3-207ENST00000610884 CCDC182A6NF36 153 aa16.42■□□□□ 0.22
SNAPC3-207ENST00000610884 ANKUB1A6NFN9 424 aa16.42■□□□□ 0.22
SNAPC3-207ENST00000610884 AKR7A3O95154 331 aa16.42■□□□□ 0.22
SNAPC3-207ENST00000610884 PRKAR1AP10644 381 aa16.42■□□□□ 0.22
SNAPC3-207ENST00000610884 PIPP12273 146 aaPredicted RBP16.42■□□□□ 0.22
SNAPC3-207ENST00000610884 MYL12AP19105 171 aa16.42■□□□□ 0.22
SNAPC3-207ENST00000610884 MLF1P58340 268 aa16.42■□□□□ 0.22
SNAPC3-207ENST00000610884 RAB40BQ12829 278 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms