RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 OR4D2P58180 307 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 MLF1P58340 268 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 RAB8AP61006 207 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 BTG2P78543 158 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 IGLV3-21P80748 117 aaPredicted RBP3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 MRPS25P82663 173 aaKnown RBP3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 IRF8Q02556 426 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 ACTN3Q08043 901 aaPredicted RBP3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 TGM3Q08188 693 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 CHIT1Q13231 466 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 CUL3Q13618 768 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 VEZF1Q14119 521 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 DOC2AQ14183 400 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 SLMAPQ14BN4 828 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 EFTUD2Q15029 972 aaKnown RBP eCLIP3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 OR4D1Q15615 310 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 FAM83EQ2M2I3 478 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 C18orf21Q32NC0 220 aaPredicted RBP3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 TOR1AIP1Q5JTV8 583 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 SLC35D3Q5M8T2 416 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 ACER2Q5QJU3 275 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 ARMC4Q5T2S8 1044 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 LIPJQ5W064 366 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 HIST2H2AA3Q6FI13 130 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 MED27Q6P2C8 311 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 TRIM40Q6P9F5 258 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 LINC00696Q6ZRV3 163 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 ZBTB49Q6ZSB9 765 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 RAPH1Q70E73 1250 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 KRT74Q7RTS7 529 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 CMC1Q7Z7K0 106 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 CENPVQ7Z7K6 275 aaPredicted RBP3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 CTAGE6Q86UF2 777 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 LCA5Q86VQ0 697 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 RPS19BP1Q86WX3 136 aaKnown RBP3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 CRLF3Q8IUI8 442 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 LACC1Q8IV20 430 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 CTAGE3PQ8IX95 158 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 CA13Q8N1Q1 262 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 EIF1ADQ8N9N8 165 aaKnown RBP3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 APCDD1LQ8NCL9 501 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 CATSPER1Q8NEC5 780 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 B3GNT7Q8NFL0 401 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 OR7G3Q8NG95 312 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 OR5AP2Q8NGF4 316 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 OR13C3Q8NGS6 347 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 OR8K3Q8NH51 312 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 TSLPQ969D9 159 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 ESAMQ96AP7 390 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 MOB3AQ96BX8 217 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 CMTM7Q96FZ5 175 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 POM121L2Q96KW2 1035 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 C16orf45Q96MC5 204 aaPredicted RBP3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 TAAR6Q96RI8 345 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 FMO2Q99518 471 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 NPAS2Q99743 824 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 OPRPNQ99935 248 aaPredicted RBP3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 UTP23Q9BRU9 249 aaKnown RBP3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 CENPOQ9BU64 300 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 NTMT1Q9BV86 223 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 MS4A8Q9BY19 250 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 CDC42EP4Q9H3Q1 356 aaKnown RBP3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 ALG9Q9H6U8 611 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 KCNK13Q9HB14 408 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 ADAP2Q9NPF8 381 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 PRTFDC1Q9NRG1 225 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 MS4A12Q9NXJ0 267 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 NINJ2Q9NZG7 142 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 CD274Q9NZQ7 290 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 OPTCQ9UBM4 332 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 FETUBQ9UGM5 382 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 TMCO1Q9UM00 188 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 MRPS33Q9Y291 106 aaKnown RBP3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 EXOGQ9Y2C4 368 aaKnown RBP3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 ZNF835Q9Y2P0 537 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 APCP25054 2843 aa3.09□□□□□ -1.92
CKS1BP3-201ENST00000600888 TEP1Q99973 2627 aaKnown RBP3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 MED12LQ86YW9 2145 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 A0A087WUV0 522 aaPredicted RBP3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 IGHV3-20A0A0C4DH32 117 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 NCF1BA6NI72 391 aaPredicted RBP3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 GABRR3A8MPY1 467 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 A8MUI8 341 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 NCF1CA8MVU1 366 aaPredicted RBP3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 SUPT3HB4E1H0 165 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 UBXN8O00124 270 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 FOXE1O00358 373 aaPredicted RBP3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 ERI3O43414 337 aaKnown RBP3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 NME2P1O60361 137 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 B4GALT2O60909 372 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 GLRA3O75311 464 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 SUPT3HO75486 399 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 CDK2AP2O75956 126 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 SEMA3DO95025 777 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 RPS17P08708 135 aaKnown RBP3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 SNRPAP09012 282 aaKnown RBP3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 SAGP10523 405 aaPredicted RBP3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 IRF2P14316 349 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 NCF1P14598 390 aaPredicted RBP3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 HIST1H1TP22492 207 aaPredicted RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms