RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 SQSTM1Q13501 440 aa16.24■□□□□ 0.19
GNE-204ENST00000539208 SGCBQ16585 318 aa16.24■□□□□ 0.19
GNE-204ENST00000539208 PLA1AQ53H76 456 aa16.24■□□□□ 0.19
GNE-204ENST00000539208 TMEM71Q6P5X7 295 aa16.24■□□□□ 0.19
GNE-204ENST00000539208 RABEPKQ7Z6M1 372 aa16.24■□□□□ 0.19
GNE-204ENST00000539208 GPR119Q8TDV5 335 aa16.24■□□□□ 0.19
GNE-204ENST00000539208 RGP1Q92546 391 aaPredicted RBP16.24■□□□□ 0.19
GNE-204ENST00000539208 KLHL15Q96M94 604 aa16.24■□□□□ 0.19
GNE-204ENST00000539208 DERL3Q96Q80 235 aa16.24■□□□□ 0.19
GNE-204ENST00000539208 ELF4Q99607 663 aaPredicted RBP16.24■□□□□ 0.19
GNE-204ENST00000539208 PTDSS2Q9BVG9 487 aa16.24■□□□□ 0.19
GNE-204ENST00000539208 WDR76Q9H967 626 aa16.24■□□□□ 0.19
GNE-204ENST00000539208 SLC22A11Q9NSA0 550 aa16.24■□□□□ 0.19
GNE-204ENST00000539208 CTSFQ9UBX1 484 aa16.24■□□□□ 0.19
GNE-204ENST00000539208 KLHDC2Q9Y2U9 406 aa16.24■□□□□ 0.19
GNE-204ENST00000539208 TMEM14AQ9Y6G1 99 aa16.24■□□□□ 0.19
GNE-204ENST00000539208 IGLV3-12A0A075B6K2 115 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 A0A1B0GVC2 190 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 A6NIN4 97 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 HSPB2A8KAH6 182 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 A8MV72 311 aaPredicted RBP16.23■□□□□ 0.19
GNE-204ENST00000539208 SLC25A12O75746 678 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 NUDT14O95848 222 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 ARRB1P49407 418 aaPredicted RBP16.23■□□□□ 0.19
GNE-204ENST00000539208 EGR3Q06889 387 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 ALKBH1Q13686 389 aaKnown RBP16.23■□□□□ 0.19
GNE-204ENST00000539208 HSPB2Q16082 182 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 SLC36A2Q495M3 483 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 LIPNQ5VXI9 398 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 TIGD3Q6B0B8 471 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 LANCL3Q6ZV70 420 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 TCTE3Q8IZS6 198 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 OR4D9Q8NGE8 314 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 CCDC74AQ96AQ1 378 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 SEMA4CQ9C0C4 833 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 ABCG5Q9H222 651 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 RANGRFQ9HD47 186 aaPredicted RBP16.23■□□□□ 0.19
GNE-204ENST00000539208 PCDHGA9Q9Y5G4 932 aaKnown RBP16.23■□□□□ 0.19
GNE-204ENST00000539208 CACNG2Q9Y698 323 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 INMT-MINDY4F8WBC2 141 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 PHYHO14832 338 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 CTDSPLO15194 276 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 GSTZ1O43708 216 aaPredicted RBP16.23■□□□□ 0.19
GNE-204ENST00000539208 OR8G3PP0DMU2 310 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 PRKCAP17252 672 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 ALOX5APP20292 161 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 AGFG1P52594 562 aaKnown RBP16.23■□□□□ 0.19
GNE-204ENST00000539208 UBE2NLQ5JXB2 153 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 FAM69AQ5T7M9 428 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 C1QL3Q5VWW1 255 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 BICRALQ6AI39 1079 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 ASB18Q6ZVZ8 466 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 MISPQ8IVT2 679 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 YIPF7Q8N8F6 280 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 DTX3Q8N9I9 347 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 RNF170Q96K19 258 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 MRI1Q9BV20 369 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 LAMP5Q9UJQ1 280 aa16.23■□□□□ 0.19
GNE-204ENST00000539208 TMED7-TICAM2A0A0A6YYA0 188 aa16.22■□□□□ 0.19
GNE-204ENST00000539208 FAM172BPA6NC97 362 aa16.22■□□□□ 0.19
GNE-204ENST00000539208 IFITM5A6NNB3 132 aa16.22■□□□□ 0.19
GNE-204ENST00000539208 C17orf51A8MQB3 221 aa16.22■□□□□ 0.19
GNE-204ENST00000539208 A8MVM7 634 aa16.22■□□□□ 0.19
GNE-204ENST00000539208 AIPO00170 330 aa16.22■□□□□ 0.19
GNE-204ENST00000539208 PSMD9O00233 223 aa16.22■□□□□ 0.19
GNE-204ENST00000539208 KHNYNO15037 678 aaKnown RBP16.22■□□□□ 0.19
GNE-204ENST00000539208 ITGA10O75578 1167 aa16.22■□□□□ 0.19
GNE-204ENST00000539208 DXOO77932 396 aaKnown RBP16.22■□□□□ 0.19
GNE-204ENST00000539208 MAPK3P27361 379 aaPredicted RBP16.22■□□□□ 0.19
GNE-204ENST00000539208 RNF4P78317 190 aa16.22■□□□□ 0.19
GNE-204ENST00000539208 SF3B4Q15427 424 aaKnown RBP eCLIP16.22■□□□□ 0.19
GNE-204ENST00000539208 C5orf46Q6UWT4 87 aa16.22■□□□□ 0.19
GNE-204ENST00000539208 GRINAQ7Z429 371 aa16.22■□□□□ 0.19
GNE-204ENST00000539208 ADGRG3Q86Y34 549 aa16.22■□□□□ 0.19
GNE-204ENST00000539208 OR5AK2Q8NH90 309 aa16.22■□□□□ 0.19
GNE-204ENST00000539208 STK35Q8TDR2 534 aa16.22■□□□□ 0.19
GNE-204ENST00000539208 YIPF5Q969M3 257 aa16.22■□□□□ 0.19
GNE-204ENST00000539208 DMRTB1Q96MA1 342 aa16.22■□□□□ 0.19
GNE-204ENST00000539208 GFI1Q99684 422 aa16.22■□□□□ 0.19
GNE-204ENST00000539208 FRRS1LQ9P0K9 344 aa16.22■□□□□ 0.19
GNE-204ENST00000539208 RBMX2Q9Y388 322 aaKnown RBP16.22■□□□□ 0.19
GNE-204ENST00000539208 TMED7Q9Y3B3 224 aa16.22■□□□□ 0.19
GNE-204ENST00000539208 A0A0B4J203 849 aa16.21■□□□□ 0.19
GNE-204ENST00000539208 H7C1C5 153 aa16.21■□□□□ 0.19
GNE-204ENST00000539208 ADAM10O14672 748 aa16.21■□□□□ 0.19
GNE-204ENST00000539208 GMFGO60234 142 aa16.21■□□□□ 0.19
GNE-204ENST00000539208 SUSD5O60279 629 aa16.21■□□□□ 0.19
GNE-204ENST00000539208 CENPAP49450 140 aa16.21■□□□□ 0.19
GNE-204ENST00000539208 LCN6P62502 163 aa16.21■□□□□ 0.19
GNE-204ENST00000539208 Q499Y3 187 aa16.21■□□□□ 0.19
GNE-204ENST00000539208 ZNF671Q8TAW3 534 aa16.21■□□□□ 0.19
GNE-204ENST00000539208 STT3BQ8TCJ2 826 aa16.21■□□□□ 0.19
GNE-204ENST00000539208 INTS14Q96SY0 518 aa16.21■□□□□ 0.19
GNE-204ENST00000539208 SYT4Q9H2B2 425 aa16.21■□□□□ 0.19
GNE-204ENST00000539208 ANKRD10Q9NXR5 420 aa16.21■□□□□ 0.19
GNE-204ENST00000539208 FKBP7Q9Y680 259 aa16.21■□□□□ 0.19
GNE-204ENST00000539208 TRBV5-5A0A0J9YX44 114 aa16.21■□□□□ 0.19
GNE-204ENST00000539208 TVP23AA6NH52 213 aa16.21■□□□□ 0.19
GNE-204ENST00000539208 ACOD1A6NK06 481 aa16.21■□□□□ 0.19
GNE-204ENST00000539208 XKRYO14609 159 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms