RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 C2orf42Q9NWW7 574 aa11.65□□□□□ -0.55
VPS52-218ENST00000482399 FLRT3Q9NZU0 649 aa11.65□□□□□ -0.55
VPS52-218ENST00000482399 CES1P1Q9UKY3 287 aa11.65□□□□□ -0.55
VPS52-218ENST00000482399 TCF20Q9UGU0 1960 aaKnown RBP11.64□□□□□ -0.55
VPS52-218ENST00000482399 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.64□□□□□ -0.55
VPS52-218ENST00000482399 CDC14CA4D256 554 aa11.64□□□□□ -0.55
VPS52-218ENST00000482399 H7C2Y5 167 aa11.64□□□□□ -0.55
VPS52-218ENST00000482399 XKRYO14609 159 aa11.64□□□□□ -0.55
VPS52-218ENST00000482399 RPS15AP62244 130 aaKnown RBP11.64□□□□□ -0.55
VPS52-218ENST00000482399 ACSM1Q08AH1 577 aa11.64□□□□□ -0.55
VPS52-218ENST00000482399 HACD4Q5VWC8 232 aa11.64□□□□□ -0.55
VPS52-218ENST00000482399 SLC6A19Q695T7 634 aa11.64□□□□□ -0.55
VPS52-218ENST00000482399 STAC2Q6ZMT1 411 aa11.64□□□□□ -0.55
VPS52-218ENST00000482399 GALNTL5Q7Z4T8 443 aa11.64□□□□□ -0.55
VPS52-218ENST00000482399 SFTPA2Q8IWL1 248 aa11.64□□□□□ -0.55
VPS52-218ENST00000482399 MUC20Q8N307 709 aaPredicted RBP11.64□□□□□ -0.55
VPS52-218ENST00000482399 OR51A4Q8NGJ6 313 aa11.64□□□□□ -0.55
VPS52-218ENST00000482399 FGF11Q92914 225 aa11.64□□□□□ -0.55
VPS52-218ENST00000482399 GIMAP5Q96F15 307 aa11.64□□□□□ -0.55
VPS52-218ENST00000482399 OR2M4Q96R27 311 aa11.64□□□□□ -0.55
VPS52-218ENST00000482399 HPF1Q9NWY4 346 aa11.64□□□□□ -0.55
VPS52-218ENST00000482399 LRIT1Q9P2V4 623 aa11.64□□□□□ -0.55
VPS52-218ENST00000482399 RP1P56715 2156 aa11.64□□□□□ -0.55
VPS52-218ENST00000482399 RNGTTO60942 597 aaKnown RBP11.64□□□□□ -0.55
VPS52-218ENST00000482399 RAB3DO95716 219 aa11.64□□□□□ -0.55
VPS52-218ENST00000482399 NMBP08949 121 aa11.64□□□□□ -0.55
VPS52-218ENST00000482399 AKR1C4P17516 323 aa11.64□□□□□ -0.55
VPS52-218ENST00000482399 EEF1A1P68104 462 aaKnown RBP11.64□□□□□ -0.55
VPS52-218ENST00000482399 C2orf68Q2NKX9 166 aa11.64□□□□□ -0.55
VPS52-218ENST00000482399 KLHL26Q53HC5 615 aa11.64□□□□□ -0.55
VPS52-218ENST00000482399 DMRTC1Q5HYR2 192 aa11.64□□□□□ -0.55
VPS52-218ENST00000482399 LRFN4Q6PJG9 635 aa11.64□□□□□ -0.55
VPS52-218ENST00000482399 ATRAIDQ6UW56 229 aa11.64□□□□□ -0.55
VPS52-218ENST00000482399 BAIAP2L2Q6UXY1 529 aa11.64□□□□□ -0.55
VPS52-218ENST00000482399 CSNK1A1LQ8N752 337 aa11.64□□□□□ -0.55
VPS52-218ENST00000482399 TMEM52Q8NDY8 209 aa11.64□□□□□ -0.55
VPS52-218ENST00000482399 SLC6A7Q99884 636 aa11.64□□□□□ -0.55
VPS52-218ENST00000482399 SYT4Q9H2B2 425 aa11.64□□□□□ -0.55
VPS52-218ENST00000482399 CGGBP1Q9UFW8 167 aaPredicted RBP11.64□□□□□ -0.55
VPS52-218ENST00000482399 ST6GALNAC2Q9UJ37 374 aa11.64□□□□□ -0.55
VPS52-218ENST00000482399 A0A1B0GUH1 482 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 OR14I1A6ND48 311 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 ZNF705EA8MWA4 302 aaPredicted RBP11.63□□□□□ -0.55
VPS52-218ENST00000482399 AGPAT2O15120 278 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 PIN1P1O15428 100 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 PPM1BO75688 479 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 GIPP09681 153 aaPredicted RBP11.63□□□□□ -0.55
VPS52-218ENST00000482399 PPP3CBP16298 524 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 POU3F4P49335 361 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 RBMS2Q15434 407 aaKnown RBP11.63□□□□□ -0.55
VPS52-218ENST00000482399 GFOD2Q3B7J2 385 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 OR7E24Q6IFN5 339 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 HAGHLQ6PII5 290 aaPredicted RBP11.63□□□□□ -0.55
VPS52-218ENST00000482399 RHOUQ7L0Q8 258 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 MRGPREQ86SM8 312 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 SDR16C5Q8N3Y7 309 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 PPP1R14AQ96A00 147 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 TIMP4Q99727 224 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 ZNF768Q9H5H4 540 aaKnown RBP11.63□□□□□ -0.55
VPS52-218ENST00000482399 Q9N2J8 555 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 CHD7Q9P2D1 2997 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 GPR75O95800 540 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 CXCL10P02778 98 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 CEACAM5P06731 702 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 NGFRP08138 427 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 PEBP1P30086 187 aaKnown RBP11.63□□□□□ -0.55
VPS52-218ENST00000482399 SPOCK1Q08629 439 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 CDNFQ49AH0 187 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 ALG10Q5BKT4 473 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 ZCCHC12Q6PEW1 402 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 SCARB1Q8WTV0 552 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 HGDQ93099 445 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 C3orf49Q96BT1 292 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 APOOQ9BUR5 198 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 ZNF416Q9BWM5 594 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 TMEM231Q9H6L2 316 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 ZNF230Q9UIE0 474 aaPredicted RBP11.63□□□□□ -0.55
VPS52-218ENST00000482399 ALPK3Q96L96 1907 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 SLC22A23A1A5C7 686 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 NAP1L6A6NFF2 107 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 KRBOX1C9JBD0 128 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 HRKO00198 91 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 CYB5AP00167 134 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 DCNP07585 359 aaKnown RBP11.63□□□□□ -0.55
VPS52-218ENST00000482399 HOXD4P09016 255 aaPredicted RBP11.63□□□□□ -0.55
VPS52-218ENST00000482399 CCL5P13501 91 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 UGT2B7P16662 529 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 GDI1P31150 447 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 DNASE1L1P49184 302 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 FBXW4P57775 412 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 OR2AK2Q8NG84 335 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 FGF13Q92913 245 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 ZNF707Q96C28 371 aaPredicted RBP11.63□□□□□ -0.55
VPS52-218ENST00000482399 SLC25A38Q96DW6 304 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 SERINC2Q96SA4 455 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 ADAT1Q9BUB4 502 aaKnown RBP11.63□□□□□ -0.55
VPS52-218ENST00000482399 OR8D2Q9GZM6 311 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 TAS2R5Q9NYW4 299 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 ERVK-19Q9WJR5 959 aa11.63□□□□□ -0.55
VPS52-218ENST00000482399 MDC1Q14676 2089 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms