RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 RLIMQ9NVW2 624 aa13.76□□□□□ -0.21
DDX56-210ENST00000479440 B3GAT1Q9P2W7 334 aa13.76□□□□□ -0.21
DDX56-210ENST00000479440 ZDHHC2Q9UIJ5 367 aa13.76□□□□□ -0.21
DDX56-210ENST00000479440 M0R3G1 203 aa13.75□□□□□ -0.21
DDX56-210ENST00000479440 DEAF1O75398 565 aaPredicted RBP13.75□□□□□ -0.21
DDX56-210ENST00000479440 UBL3O95164 117 aa13.75□□□□□ -0.21
DDX56-210ENST00000479440 FSHBP01225 129 aa13.75□□□□□ -0.21
DDX56-210ENST00000479440 IGHV2-5P01817 119 aa13.75□□□□□ -0.21
DDX56-210ENST00000479440 SHBGP04278 402 aa13.75□□□□□ -0.21
DDX56-210ENST00000479440 FAM153BP0C7A2 387 aa13.75□□□□□ -0.21
DDX56-210ENST00000479440 PRTN3P24158 256 aa13.75□□□□□ -0.21
DDX56-210ENST00000479440 ACAA2P42765 397 aaKnown RBP13.75□□□□□ -0.21
DDX56-210ENST00000479440 MAGEB1P43366 347 aa13.75□□□□□ -0.21
DDX56-210ENST00000479440 RPS5P46782 204 aaKnown RBP13.75□□□□□ -0.21
DDX56-210ENST00000479440 CLNS1AP54105 237 aaKnown RBP13.75□□□□□ -0.21
DDX56-210ENST00000479440 RNF220Q5VTB9 566 aa13.75□□□□□ -0.21
DDX56-210ENST00000479440 RGS7BPQ6MZT1 257 aaPredicted RBP13.75□□□□□ -0.21
DDX56-210ENST00000479440 TMEM154Q6P9G4 183 aa13.75□□□□□ -0.21
DDX56-210ENST00000479440 ZNF813Q6ZN06 617 aa13.75□□□□□ -0.21
DDX56-210ENST00000479440 VRK2Q86Y07 508 aa13.75□□□□□ -0.21
DDX56-210ENST00000479440 TMEM123Q8N131 208 aa13.75□□□□□ -0.21
DDX56-210ENST00000479440 C22orf15Q8WYQ4 148 aa13.75□□□□□ -0.21
DDX56-210ENST00000479440 TIMD4Q96H15 378 aa13.75□□□□□ -0.21
DDX56-210ENST00000479440 PTDSS2Q9BVG9 487 aa13.75□□□□□ -0.21
DDX56-210ENST00000479440 ARMC7Q9H6L4 198 aa13.75□□□□□ -0.21
DDX56-210ENST00000479440 C7orf69Q9H7B7 122 aa13.75□□□□□ -0.21
DDX56-210ENST00000479440 P2RX2Q9UBL9 471 aa13.75□□□□□ -0.21
DDX56-210ENST00000479440 POFUT2Q9Y2G5 429 aa13.75□□□□□ -0.21
DDX56-210ENST00000479440 NUP214P35658 2090 aaPredicted RBP13.75□□□□□ -0.21
DDX56-210ENST00000479440 POM121CA8CG34 1229 aa13.74□□□□□ -0.21
DDX56-210ENST00000479440 C17orf100A8MU93 164 aa13.74□□□□□ -0.21
DDX56-210ENST00000479440 E9PBE3 544 aa13.74□□□□□ -0.21
DDX56-210ENST00000479440 CDC14BO60729 498 aa13.74□□□□□ -0.21
DDX56-210ENST00000479440 RAD52P43351 418 aa13.74□□□□□ -0.21
DDX56-210ENST00000479440 PIGFQ07326 219 aa13.74□□□□□ -0.21
DDX56-210ENST00000479440 LARS2Q15031 903 aaKnown RBP13.74□□□□□ -0.21
DDX56-210ENST00000479440 CHI3L2Q15782 390 aa13.74□□□□□ -0.21
DDX56-210ENST00000479440 ALKBH6Q3KRA9 238 aa13.74□□□□□ -0.21
DDX56-210ENST00000479440 ARMCX4Q5H9R4 360 aa13.74□□□□□ -0.21
DDX56-210ENST00000479440 SPANXN4Q5MJ08 99 aa13.74□□□□□ -0.21
DDX56-210ENST00000479440 C5orf46Q6UWT4 87 aa13.74□□□□□ -0.21
DDX56-210ENST00000479440 DOK3Q7L591 496 aa13.74□□□□□ -0.21
DDX56-210ENST00000479440 LRRC34Q8IZ02 419 aa13.74□□□□□ -0.21
DDX56-210ENST00000479440 OR52P1PQ8NH57 321 aa13.74□□□□□ -0.21
DDX56-210ENST00000479440 EPS8L3Q8TE67 593 aaKnown RBP13.74□□□□□ -0.21
DDX56-210ENST00000479440 ZNF75AQ96N20 296 aa13.74□□□□□ -0.21
DDX56-210ENST00000479440 CCDC115Q96NT0 180 aa13.74□□□□□ -0.21
DDX56-210ENST00000479440 HINT3Q9NQE9 182 aaKnown RBP13.74□□□□□ -0.21
DDX56-210ENST00000479440 MED29Q9NX70 200 aa13.74□□□□□ -0.21
DDX56-210ENST00000479440 CALML5Q9NZT1 146 aa13.74□□□□□ -0.21
DDX56-210ENST00000479440 TAAR3PQ9P1P4 343 aa13.74□□□□□ -0.21
DDX56-210ENST00000479440 SEC14L4Q9UDX3 406 aa13.74□□□□□ -0.21
DDX56-210ENST00000479440 BTNL2Q9UIR0 455 aa13.74□□□□□ -0.21
DDX56-210ENST00000479440 ZNF443Q9Y2A4 671 aaPredicted RBP13.74□□□□□ -0.21
DDX56-210ENST00000479440 IGHV1-69-2A0A0G2JMI3 117 aa13.73□□□□□ -0.21
DDX56-210ENST00000479440 SLC22A23A1A5C7 686 aa13.73□□□□□ -0.21
DDX56-210ENST00000479440 DNAJC9-AS1A6NH13 148 aa13.73□□□□□ -0.21
DDX56-210ENST00000479440 M0R082 166 aa13.73□□□□□ -0.21
DDX56-210ENST00000479440 TRAF3IP2O43734 574 aaPredicted RBP13.73□□□□□ -0.21
DDX56-210ENST00000479440 OR2T1O43869 369 aa13.73□□□□□ -0.21
DDX56-210ENST00000479440 FZD7O75084 574 aa13.73□□□□□ -0.21
DDX56-210ENST00000479440 NUDT17P0C025 328 aa13.73□□□□□ -0.21
DDX56-210ENST00000479440 B4GALT1P15291 398 aa13.73□□□□□ -0.21
DDX56-210ENST00000479440 CRYBB2P43320 205 aa13.73□□□□□ -0.21
DDX56-210ENST00000479440 CCL8P80075 99 aa13.73□□□□□ -0.21
DDX56-210ENST00000479440 FAM69AQ5T7M9 428 aa13.73□□□□□ -0.21
DDX56-210ENST00000479440 CARD17Q5XLA6 110 aa13.73□□□□□ -0.21
DDX56-210ENST00000479440 ZNF627Q7L945 461 aa13.73□□□□□ -0.21
DDX56-210ENST00000479440 RETREG3Q86VR2 466 aa13.73□□□□□ -0.21
DDX56-210ENST00000479440 UEVLDQ8IX04 471 aa13.73□□□□□ -0.21
DDX56-210ENST00000479440 C20orf196Q8IYI0 205 aa13.73□□□□□ -0.21
DDX56-210ENST00000479440 SIGLECL1Q8N7X8 197 aa13.73□□□□□ -0.21
DDX56-210ENST00000479440 ADPRHL1Q8NDY3 354 aa13.73□□□□□ -0.21
DDX56-210ENST00000479440 ZNF417Q8TAU3 575 aa13.73□□□□□ -0.21
DDX56-210ENST00000479440 POP5Q969H6 163 aaKnown RBP13.73□□□□□ -0.21
DDX56-210ENST00000479440 KTI12Q96EK9 354 aaPredicted RBP13.73□□□□□ -0.21
DDX56-210ENST00000479440 LRR1Q96L50 414 aa13.73□□□□□ -0.21
DDX56-210ENST00000479440 C16orf45Q96MC5 204 aaPredicted RBP13.73□□□□□ -0.21
DDX56-210ENST00000479440 PANX1Q96RD7 426 aa13.73□□□□□ -0.21
DDX56-210ENST00000479440 ZNF587Q96SQ5 575 aaPredicted RBP13.73□□□□□ -0.21
DDX56-210ENST00000479440 GPA33Q99795 319 aa13.73□□□□□ -0.21
DDX56-210ENST00000479440 FOXB1Q99853 325 aa13.73□□□□□ -0.21
DDX56-210ENST00000479440 GAL3ST1Q99999 423 aa13.73□□□□□ -0.21
DDX56-210ENST00000479440 SLITRK2Q9H156 845 aa13.73□□□□□ -0.21
DDX56-210ENST00000479440 NKIRAS2Q9NYR9 191 aa13.73□□□□□ -0.21
DDX56-210ENST00000479440 OPN4Q9UHM6 478 aa13.73□□□□□ -0.21
DDX56-210ENST00000479440 WIPI2Q9Y4P8 454 aa13.73□□□□□ -0.21
DDX56-210ENST00000479440 CCDC154A6NI56 674 aa13.72□□□□□ -0.21
DDX56-210ENST00000479440 TPD52L2O43399 206 aaKnown RBP13.72□□□□□ -0.21
DDX56-210ENST00000479440 MT-ND5P03915 603 aa13.72□□□□□ -0.21
DDX56-210ENST00000479440 ARRB2P32121 409 aa13.72□□□□□ -0.21
DDX56-210ENST00000479440 S100A3P33764 101 aa13.72□□□□□ -0.21
DDX56-210ENST00000479440 GIPRP48546 466 aa13.72□□□□□ -0.21
DDX56-210ENST00000479440 CRISP3P54108 245 aa13.72□□□□□ -0.21
DDX56-210ENST00000479440 KLF3P57682 345 aaPredicted RBP13.72□□□□□ -0.21
DDX56-210ENST00000479440 RAB1AP62820 205 aa13.72□□□□□ -0.21
DDX56-210ENST00000479440 CAMK2DQ13557 499 aa13.72□□□□□ -0.21
DDX56-210ENST00000479440 OCLNQ16625 522 aa13.72□□□□□ -0.21
DDX56-210ENST00000479440 PHYHD1Q5SRE7 291 aa13.72□□□□□ -0.21
DDX56-210ENST00000479440 UBLCP1Q8WVY7 318 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms