RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 SLC25A53Q5H9E4 307 aa5.3□□□□□ -1.56
HDAC3-206ENST00000471968 TEX35Q5T0J7 233 aa5.3□□□□□ -1.56
HDAC3-206ENST00000471968 C9orf66Q5T8R8 295 aa5.3□□□□□ -1.56
HDAC3-206ENST00000471968 PRUNE1Q86TP1 453 aa5.3□□□□□ -1.56
HDAC3-206ENST00000471968 TXLNBQ8N3L3 684 aa5.3□□□□□ -1.56
HDAC3-206ENST00000471968 OR9K2Q8NGE7 335 aa5.3□□□□□ -1.56
HDAC3-206ENST00000471968 SLC35B2Q8TB61 432 aa5.3□□□□□ -1.56
HDAC3-206ENST00000471968 ZNF519Q8TB69 540 aa5.3□□□□□ -1.56
HDAC3-206ENST00000471968 NPRL2Q8WTW4 380 aa5.3□□□□□ -1.56
HDAC3-206ENST00000471968 ZNF669Q96BR6 464 aaPredicted RBP5.3□□□□□ -1.56
HDAC3-206ENST00000471968 FAM234AQ9H0X4 552 aa5.3□□□□□ -1.56
HDAC3-206ENST00000471968 RNF121Q9H920 327 aa5.3□□□□□ -1.56
HDAC3-206ENST00000471968 C3orf14Q9HBI5 128 aa5.3□□□□□ -1.56
HDAC3-206ENST00000471968 B3GNT2Q9NY97 397 aa5.3□□□□□ -1.56
HDAC3-206ENST00000471968 REXO2Q9Y3B8 237 aaKnown RBP5.3□□□□□ -1.56
HDAC3-206ENST00000471968 PRSS29PA6NIE9 313 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 AKR1B15C9JRZ8 316 aaPredicted RBP5.29□□□□□ -1.56
HDAC3-206ENST00000471968 PHYHO14832 338 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 NPFFO15130 113 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 DNPH1O43598 174 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 DOK2O60496 412 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 GUCY1B2O75343 617 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 SLC43A1O75387 559 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 IGHV3-13P01766 116 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 SERPING1P05155 500 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 EEF1B2P24534 225 aaKnown RBP5.29□□□□□ -1.56
HDAC3-206ENST00000471968 GIPRP48546 466 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 MTNR1BP49286 362 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 BMXP51813 675 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 PRKAG1P54619 331 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 SUMO3P55854 103 aaPredicted RBP5.29□□□□□ -1.56
HDAC3-206ENST00000471968 COPS2P61201 443 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 PHEXP78562 749 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 TNFAIP6P98066 277 aaPredicted RBP5.29□□□□□ -1.56
HDAC3-206ENST00000471968 MERTKQ12866 999 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 PMS2P11Q13670 270 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 TSNQ15631 228 aaKnown RBP5.29□□□□□ -1.56
HDAC3-206ENST00000471968 LGALS9CQ6DKI2 356 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 GRHL2Q6ISB3 625 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 AADACL2Q6P093 401 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 NIPAL3Q6P499 406 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 VMO1Q7Z5L0 202 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 CENPVQ7Z7K6 275 aaPredicted RBP5.29□□□□□ -1.56
HDAC3-206ENST00000471968 GPAT4Q86UL3 456 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 LSRQ86X29 649 aaPredicted RBP5.29□□□□□ -1.56
HDAC3-206ENST00000471968 CCDC36Q8IYA8 594 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 GPR137CQ8N3F9 429 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 GPR151Q8TDV0 419 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 SLC25A43Q8WUT9 341 aaPredicted RBP5.29□□□□□ -1.56
HDAC3-206ENST00000471968 RORBQ92753 470 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 ZNF75AQ96N20 296 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 TECTBQ96PL2 329 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 ARHGDIGQ99819 225 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 TMEM246Q9BRR3 403 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 LMF2Q9BU23 707 aaKnown RBP5.29□□□□□ -1.56
HDAC3-206ENST00000471968 HIPK2Q9H2X6 1198 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 KCNK9Q9NPC2 374 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 UBQLN4Q9NRR5 601 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 C20orf96Q9NUD7 363 aaPredicted RBP5.29□□□□□ -1.56
HDAC3-206ENST00000471968 DNAJB11Q9UBS4 358 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 SCOCQ9UIL1 159 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 NDRG4Q9ULP0 352 aaKnown RBP5.29□□□□□ -1.56
HDAC3-206ENST00000471968 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.29□□□□□ -1.56
HDAC3-206ENST00000471968 GPR45Q9Y5Y3 372 aa5.29□□□□□ -1.56
HDAC3-206ENST00000471968 FLG2Q5D862 2391 aaPredicted RBP5.28□□□□□ -1.56
HDAC3-206ENST00000471968 A0A1W2PQD3 144 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 CXorf65A6NEN9 183 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 TMEM178BH3BS89 294 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 FAM20BO75063 409 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 RAB36O95755 333 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 OTCP00480 354 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 CCL2P13500 99 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 ETS1P14921 441 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 TYK2P29597 1187 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 SAA4P35542 130 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 GP2P55259 537 aaKnown RBP5.28□□□□□ -1.56
HDAC3-206ENST00000471968 PRR20EP86478 221 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 PRR20CP86479 221 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 PRR20DP86480 221 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 PRR20BP86481 221 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 PRR20AP86496 221 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 TBX2Q13207 712 aaPredicted RBP5.28□□□□□ -1.56
HDAC3-206ENST00000471968 TGFBIQ15582 683 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 RUNDC3AQ59EK9 446 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 TMEM107Q6UX40 140 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 C16orf89Q6UX73 402 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 Q6ZS46 218 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 LMNTD2Q8IXW0 634 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 FAM9CQ8IZT9 166 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 TCAIMQ8N3R3 496 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 PNKDQ8N490 385 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 PAQR4Q8N4S7 273 aaPredicted RBP5.28□□□□□ -1.56
HDAC3-206ENST00000471968 PNLDC1Q8NA58 520 aaKnown RBP5.28□□□□□ -1.56
HDAC3-206ENST00000471968 BEND2Q8NDZ0 799 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 OR4X2Q8NGF9 303 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 OR51G2Q8NGK0 314 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 C10orf82Q8WW14 230 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 EXOSC8Q96B26 276 aaKnown RBP5.28□□□□□ -1.56
HDAC3-206ENST00000471968 PDLIM5Q96HC4 596 aaKnown RBP5.28□□□□□ -1.56
HDAC3-206ENST00000471968 FAM46AQ96IP4 442 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms