RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 MAGEL2Q9UJ55 1249 aa11.35□□□□□ -0.59
COL5A1-206ENST00000465877 RIMS3Q9UJD0 308 aa11.35□□□□□ -0.59
COL5A1-206ENST00000465877 ZNF229Q9UJW7 825 aa11.35□□□□□ -0.59
COL5A1-206ENST00000465877 ADAM21Q9UKJ8 722 aa11.35□□□□□ -0.59
COL5A1-206ENST00000465877 PRRC2AP48634 2157 aaKnown RBP11.35□□□□□ -0.59
COL5A1-206ENST00000465877 MAP1AP78559 2803 aaPredicted RBP11.34□□□□□ -0.59
COL5A1-206ENST00000465877 LOC102725191A0A1B0GVB3 256 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 OR6C65A6NJZ3 312 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 MS4A18H0YCH9 400 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 J3KTA2 159 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 PLPP3O14495 311 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 SLC43A1O75387 559 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 SERPINI2O75830 405 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 KRT33AO76009 404 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 CH25HO95992 272 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 MT-ND1P03886 318 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 RAF1P04049 648 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 ASAH2BP0C7U1 165 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 ADORA3P0DMS8 318 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 UMPSP11172 480 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 HLA-DOBP13765 273 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 TCN1P20061 433 aaPredicted RBP11.34□□□□□ -0.59
COL5A1-206ENST00000465877 MPGP29372 298 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 HOXC12P31275 282 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 ST3GAL3Q11203 375 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 PMS2P3Q13401 168 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 GABRA6Q16445 453 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 MS4A18Q3C1V0 323 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 SAMD4BQ5PRF9 694 aaKnown RBP11.34□□□□□ -0.59
COL5A1-206ENST00000465877 OR7E24Q6IFN5 339 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 ZNF704Q6ZNC4 412 aaPredicted RBP11.34□□□□□ -0.59
COL5A1-206ENST00000465877 LINGO2Q7L985 606 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 SSX8Q7RTT4 187 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 NANOGNBQ7Z5D8 188 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 P2RY8Q86VZ1 359 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 DEFB107AQ8IZN7 70 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 TMEM123Q8N131 208 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 C17orf78Q8N4C9 275 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 OR52N5Q8NH56 324 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 MUCL1Q96DR8 90 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 OR2M2Q96R28 347 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 LINC00470Q9BZP3 86 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 ESRP2Q9H6T0 727 aaKnown RBP11.34□□□□□ -0.59
COL5A1-206ENST00000465877 CCM2LQ9NUG4 571 aaPredicted RBP11.34□□□□□ -0.59
COL5A1-206ENST00000465877 MED29Q9NX70 200 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 NPAP1Q9NZP6 1156 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 RPS6KA6Q9UK32 745 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 ITGB1BP2Q9UKP3 347 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 SAMD4AQ9UPU9 718 aaKnown RBP11.34□□□□□ -0.59
COL5A1-206ENST00000465877 NOX1Q9Y5S8 564 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 SNX13Q9Y5W8 968 aa11.34□□□□□ -0.59
COL5A1-206ENST00000465877 C11orf98E9PRG8 122 aa11.33□□□□□ -0.6
COL5A1-206ENST00000465877 ARPC2O15144 300 aa11.33□□□□□ -0.6
COL5A1-206ENST00000465877 PIP5K1CO60331 668 aa11.33□□□□□ -0.6
COL5A1-206ENST00000465877 GMNNO75496 209 aa11.33□□□□□ -0.6
COL5A1-206ENST00000465877 UPK3AO75631 287 aa11.33□□□□□ -0.6
COL5A1-206ENST00000465877 PRSS23O95084 383 aa11.33□□□□□ -0.6
COL5A1-206ENST00000465877 OR6A2O95222 327 aa11.33□□□□□ -0.6
COL5A1-206ENST00000465877 ATE1O95260 518 aa11.33□□□□□ -0.6
COL5A1-206ENST00000465877 IGF2P01344 180 aa11.33□□□□□ -0.6
COL5A1-206ENST00000465877 AHCYP23526 432 aa11.33□□□□□ -0.6
COL5A1-206ENST00000465877 DNASE1P24855 282 aa11.33□□□□□ -0.6
COL5A1-206ENST00000465877 IFNA8P32881 189 aa11.33□□□□□ -0.6
COL5A1-206ENST00000465877 YAP1P46937 504 aaKnown RBP11.33□□□□□ -0.6
COL5A1-206ENST00000465877 MNAT1P51948 309 aa11.33□□□□□ -0.6
COL5A1-206ENST00000465877 IST1P53990 364 aa11.33□□□□□ -0.6
COL5A1-206ENST00000465877 TGFBR3Q03167 851 aa11.33□□□□□ -0.6
COL5A1-206ENST00000465877 BSPH1Q075Z2 132 aa11.33□□□□□ -0.6
COL5A1-206ENST00000465877 FOXD4Q12950 439 aaPredicted RBP11.33□□□□□ -0.6
COL5A1-206ENST00000465877 GLYATQ6IB77 296 aa11.33□□□□□ -0.6
COL5A1-206ENST00000465877 FKBP9P1Q75LS8 142 aa11.33□□□□□ -0.6
COL5A1-206ENST00000465877 LRRC17Q8N6Y2 441 aa11.33□□□□□ -0.6
COL5A1-206ENST00000465877 FAM86B1Q8N7N1 296 aa11.33□□□□□ -0.6
COL5A1-206ENST00000465877 PIK3C3Q8NEB9 887 aa11.33□□□□□ -0.6
COL5A1-206ENST00000465877 TMEM204Q9BSN7 226 aa11.33□□□□□ -0.6
COL5A1-206ENST00000465877 MAN2C1Q9NTJ4 1040 aa11.33□□□□□ -0.6
COL5A1-206ENST00000465877 C20orf141Q9NUB4 165 aa11.33□□□□□ -0.6
COL5A1-206ENST00000465877 CD300AQ9UGN4 299 aa11.33□□□□□ -0.6
COL5A1-206ENST00000465877 EDARQ9UNE0 448 aa11.33□□□□□ -0.6
COL5A1-206ENST00000465877 MED31Q9Y3C7 131 aa11.33□□□□□ -0.6
COL5A1-206ENST00000465877 RNF115Q9Y4L5 304 aa11.33□□□□□ -0.6
COL5A1-206ENST00000465877 SLC25A15Q9Y619 301 aa11.33□□□□□ -0.6
COL5A1-206ENST00000465877 V9GYQ6 96 aa11.33□□□□□ -0.6
COL5A1-206ENST00000465877 ITPR3Q14573 2671 aa11.33□□□□□ -0.6
COL5A1-206ENST00000465877 ROS1P08922 2347 aa11.32□□□□□ -0.6
COL5A1-206ENST00000465877 CADP27708 2225 aa11.32□□□□□ -0.6
COL5A1-206ENST00000465877 A0A1W2PR80 420 aa11.32□□□□□ -0.6
COL5A1-206ENST00000465877 RNF13O43567 381 aa11.32□□□□□ -0.6
COL5A1-206ENST00000465877 OR7A10O76100 309 aa11.32□□□□□ -0.6
COL5A1-206ENST00000465877 PLAUP00749 431 aa11.32□□□□□ -0.6
COL5A1-206ENST00000465877 CDH2P19022 906 aaPredicted RBP11.32□□□□□ -0.6
COL5A1-206ENST00000465877 FUT4P22083 530 aa11.32□□□□□ -0.6
COL5A1-206ENST00000465877 CALB2P22676 271 aa11.32□□□□□ -0.6
COL5A1-206ENST00000465877 SH3BGRP55822 239 aaPredicted RBP11.32□□□□□ -0.6
COL5A1-206ENST00000465877 KEAP1Q14145 624 aa11.32□□□□□ -0.6
COL5A1-206ENST00000465877 HIKESHIQ53FT3 197 aa11.32□□□□□ -0.6
COL5A1-206ENST00000465877 NCMAPQ5T1S8 102 aa11.32□□□□□ -0.6
COL5A1-206ENST00000465877 KLHL24Q6TFL4 600 aa11.32□□□□□ -0.6
COL5A1-206ENST00000465877 PXKQ7Z7A4 578 aa11.32□□□□□ -0.6
COL5A1-206ENST00000465877 WDFY1Q8IWB7 410 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms