RNA–Protein interactions for RNA: ENST00000463675.5

SNU13-205, Transcript of small nuclear ribonucleoprotein 13, human

TSL 3

Gene SNU13, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNU13-205	ENST00000463675	ADPRHL1	Q8NDY3	354 aa		13.36	□□□□□ -0.27
SNU13-205	ENST00000463675	OR5J2	Q8NH18	312 aa		13.36	□□□□□ -0.27
SNU13-205	ENST00000463675	OR6S1	Q8NH40	331 aa		13.36	□□□□□ -0.27
SNU13-205	ENST00000463675	TMEM239	Q8WW34	195 aa		13.36	□□□□□ -0.27
SNU13-205	ENST00000463675	EMC6	Q9BV81	110 aa		13.36	□□□□□ -0.27
SNU13-205	ENST00000463675	HDHD5	Q9BXW7	423 aa		13.36	□□□□□ -0.27
SNU13-205	ENST00000463675	OR10A4	Q9H209	315 aa		13.36	□□□□□ -0.27
SNU13-205	ENST00000463675	PLEKHF2	Q9H8W4	249 aa		13.36	□□□□□ -0.27
SNU13-205	ENST00000463675	MED29	Q9NX70	200 aa		13.36	□□□□□ -0.27
SNU13-205	ENST00000463675	MRPL39	Q9NYK5	338 aa	Known RBP	13.36	□□□□□ -0.27
SNU13-205	ENST00000463675	RAI1	Q7Z5J4	1906 aa	Predicted RBP	13.36	□□□□□ -0.27
SNU13-205	ENST00000463675	OR5H1	A6NKK0	313 aa		13.35	□□□□□ -0.27
SNU13-205	ENST00000463675		B2RBV5	119 aa		13.35	□□□□□ -0.27
SNU13-205	ENST00000463675	MS4A18	H0YCH9	400 aa		13.35	□□□□□ -0.27
SNU13-205	ENST00000463675	hCG_2039718	K7EN88	272 aa		13.35	□□□□□ -0.27
SNU13-205	ENST00000463675	PDLIM1	O00151	329 aa		13.35	□□□□□ -0.27
SNU13-205	ENST00000463675	PLPP3	O14495	311 aa		13.35	□□□□□ -0.27
SNU13-205	ENST00000463675	FFAR1	O14842	300 aa		13.35	□□□□□ -0.27
SNU13-205	ENST00000463675	ARPC2	O15144	300 aa		13.35	□□□□□ -0.27
SNU13-205	ENST00000463675	GOSR1	O95249	250 aa		13.35	□□□□□ -0.27
SNU13-205	ENST00000463675	PLAU	P00749	431 aa		13.35	□□□□□ -0.27
SNU13-205	ENST00000463675	MT-ATP6	P00846	226 aa		13.35	□□□□□ -0.27
SNU13-205	ENST00000463675	ADORA3	P0DMS8	318 aa		13.35	□□□□□ -0.27
SNU13-205	ENST00000463675	HSD17B1	P14061	328 aa		13.35	□□□□□ -0.27
SNU13-205	ENST00000463675	FUT1	P19526	365 aa		13.35	□□□□□ -0.27
SNU13-205	ENST00000463675	PPA1	Q15181	289 aa		13.35	□□□□□ -0.27
SNU13-205	ENST00000463675	MS4A18	Q3C1V0	323 aa		13.35	□□□□□ -0.27
SNU13-205	ENST00000463675	RINL	Q6ZS11	566 aa		13.35	□□□□□ -0.27
SNU13-205	ENST00000463675	NANOGNB	Q7Z5D8	188 aa		13.35	□□□□□ -0.27
SNU13-205	ENST00000463675	OFCC1	Q8IZS5	231 aa		13.35	□□□□□ -0.27
SNU13-205	ENST00000463675	BCAS4	Q8TDM0	211 aa		13.35	□□□□□ -0.27
SNU13-205	ENST00000463675	OR2M2	Q96R28	347 aa		13.35	□□□□□ -0.27
SNU13-205	ENST00000463675	POLR2J2	Q9GZM3	115 aa	Known RBP	13.35	□□□□□ -0.27
SNU13-205	ENST00000463675	POLR2J3	Q9H1A7	115 aa	Known RBP	13.35	□□□□□ -0.27
SNU13-205	ENST00000463675	FKRP	Q9H9S5	495 aa		13.35	□□□□□ -0.27
SNU13-205	ENST00000463675	NANS	Q9NR45	359 aa		13.35	□□□□□ -0.27
SNU13-205	ENST00000463675	MAN2C1	Q9NTJ4	1040 aa		13.35	□□□□□ -0.27
SNU13-205	ENST00000463675	NPAP1	Q9NZP6	1156 aa		13.35	□□□□□ -0.27
SNU13-205	ENST00000463675	ST6GALNAC2	Q9UJ37	374 aa		13.35	□□□□□ -0.27
SNU13-205	ENST00000463675	MAGEL2	Q9UJ55	1249 aa		13.35	□□□□□ -0.27
SNU13-205	ENST00000463675	RPS6KA6	Q9UK32	745 aa		13.35	□□□□□ -0.27
SNU13-205	ENST00000463675	RCE1	Q9Y256	329 aa		13.35	□□□□□ -0.27
SNU13-205	ENST00000463675	ZNF587B	E7ETH6	402 aa		13.34	□□□□□ -0.27
SNU13-205	ENST00000463675	CLOCK	O15516	846 aa		13.34	□□□□□ -0.27
SNU13-205	ENST00000463675	SLC43A1	O75387	559 aa		13.34	□□□□□ -0.27
SNU13-205	ENST00000463675	GMNN	O75496	209 aa		13.34	□□□□□ -0.27
SNU13-205	ENST00000463675	SEC14L2	O76054	403 aa		13.34	□□□□□ -0.27
SNU13-205	ENST00000463675	PDE5A	O76074	875 aa		13.34	□□□□□ -0.27
SNU13-205	ENST00000463675	ZNF432	O94892	652 aa		13.34	□□□□□ -0.27
SNU13-205	ENST00000463675	OR6A2	O95222	327 aa		13.34	□□□□□ -0.27
SNU13-205	ENST00000463675	MT-ND1	P03886	318 aa		13.34	□□□□□ -0.27
SNU13-205	ENST00000463675	MPG	P29372	298 aa		13.34	□□□□□ -0.27
SNU13-205	ENST00000463675	RBM34	P42696	430 aa	Known RBP	13.34	□□□□□ -0.27
SNU13-205	ENST00000463675	MELK	Q14680	651 aa		13.34	□□□□□ -0.27
SNU13-205	ENST00000463675	GABRA6	Q16445	453 aa		13.34	□□□□□ -0.27
SNU13-205	ENST00000463675	HIKESHI	Q53FT3	197 aa		13.34	□□□□□ -0.27
SNU13-205	ENST00000463675	TSEN54	Q7Z6J9	526 aa	Known RBP	13.34	□□□□□ -0.27
SNU13-205	ENST00000463675	TMEM123	Q8N131	208 aa		13.34	□□□□□ -0.27
SNU13-205	ENST00000463675	POMGNT2	Q8NAT1	580 aa		13.34	□□□□□ -0.27
SNU13-205	ENST00000463675	HSD17B8	Q92506	261 aa		13.34	□□□□□ -0.27
SNU13-205	ENST00000463675	SGTB	Q96EQ0	304 aa		13.34	□□□□□ -0.27
SNU13-205	ENST00000463675	NSL1	Q96IY1	281 aa		13.34	□□□□□ -0.27
SNU13-205	ENST00000463675	TXNDC15	Q96J42	360 aa		13.34	□□□□□ -0.27
SNU13-205	ENST00000463675	FNDC11	Q9BVV2	318 aa		13.34	□□□□□ -0.27
SNU13-205	ENST00000463675	SLC19A3	Q9BZV2	496 aa		13.34	□□□□□ -0.27
SNU13-205	ENST00000463675	CCM2L	Q9NUG4	571 aa	Predicted RBP	13.34	□□□□□ -0.27
SNU13-205	ENST00000463675	NDE1	Q9NXR1	346 aa		13.34	□□□□□ -0.27
SNU13-205	ENST00000463675	CD300A	Q9UGN4	299 aa		13.34	□□□□□ -0.27
SNU13-205	ENST00000463675	ZNF229	Q9UJW7	825 aa		13.34	□□□□□ -0.27
SNU13-205	ENST00000463675	MED31	Q9Y3C7	131 aa		13.34	□□□□□ -0.27
SNU13-205	ENST00000463675	MAP1A	P78559	2803 aa	Predicted RBP	13.33	□□□□□ -0.28
SNU13-205	ENST00000463675		M0R3G1	203 aa		13.33	□□□□□ -0.28
SNU13-205	ENST00000463675	RNF13	O43567	381 aa		13.33	□□□□□ -0.28
SNU13-205	ENST00000463675	AKAP8	O43823	692 aa	Known RBP	13.33	□□□□□ -0.28
SNU13-205	ENST00000463675	OR7A10	O76100	309 aa		13.33	□□□□□ -0.28
SNU13-205	ENST00000463675	DIRAS1	O95057	198 aa		13.33	□□□□□ -0.28
SNU13-205	ENST00000463675	PRSS23	O95084	383 aa		13.33	□□□□□ -0.28
SNU13-205	ENST00000463675	ASAH2B	P0C7U1	165 aa		13.33	□□□□□ -0.28
SNU13-205	ENST00000463675	IFNGR1	P15260	489 aa		13.33	□□□□□ -0.28
SNU13-205	ENST00000463675	ATP6V1B2	P21281	511 aa		13.33	□□□□□ -0.28
SNU13-205	ENST00000463675	ZNF83	P51522	516 aa		13.33	□□□□□ -0.28
SNU13-205	ENST00000463675	IST1	P53990	364 aa		13.33	□□□□□ -0.28
SNU13-205	ENST00000463675	ROR2	Q01974	943 aa	Known RBP	13.33	□□□□□ -0.28
SNU13-205	ENST00000463675	BSPH1	Q075Z2	132 aa		13.33	□□□□□ -0.28
SNU13-205	ENST00000463675	SPOCK1	Q08629	439 aa		13.33	□□□□□ -0.28
SNU13-205	ENST00000463675	ST3GAL3	Q11203	375 aa		13.33	□□□□□ -0.28
SNU13-205	ENST00000463675	CAMK2D	Q13557	499 aa		13.33	□□□□□ -0.28
SNU13-205	ENST00000463675	TIMM23B	Q5SRD1	257 aa		13.33	□□□□□ -0.28
SNU13-205	ENST00000463675	PHYHD1	Q5SRE7	291 aa		13.33	□□□□□ -0.28
SNU13-205	ENST00000463675	ADAM5	Q6NVV9	412 aa		13.33	□□□□□ -0.28
SNU13-205	ENST00000463675	ZNF704	Q6ZNC4	412 aa	Predicted RBP	13.33	□□□□□ -0.28
SNU13-205	ENST00000463675	NRM	Q8IXM6	262 aa		13.33	□□□□□ -0.28
SNU13-205	ENST00000463675	GPR137C	Q8N3F9	429 aa		13.33	□□□□□ -0.28
SNU13-205	ENST00000463675	KBTBD8	Q8NFY9	601 aa		13.33	□□□□□ -0.28
SNU13-205	ENST00000463675	MUCL1	Q96DR8	90 aa		13.33	□□□□□ -0.28
SNU13-205	ENST00000463675	C1QTNF6	Q9BXI9	259 aa		13.33	□□□□□ -0.28
SNU13-205	ENST00000463675	DCAF13	Q9NV06	445 aa	Known RBP	13.33	□□□□□ -0.28
SNU13-205	ENST00000463675	SAMD4A	Q9UPU9	718 aa	Known RBP	13.33	□□□□□ -0.28
SNU13-205	ENST00000463675	NOX1	Q9Y5S8	564 aa		13.33	□□□□□ -0.28
SNU13-205	ENST00000463675	ENPP4	Q9Y6X5	453 aa		13.33	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms