RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 UBXN2BQ14CS0 331 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 MBOAT2Q6ZWT7 520 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 TMEM200AQ86VY9 491 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 OR51D1Q8NGF3 324 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 HS6ST2Q96MM7 605 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 LYSMD1Q96S90 227 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 SGPP1Q9BX95 441 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 AICDAQ9GZX7 198 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 OR2S2Q9NQN1 319 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 CLDND1Q9NY35 253 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 POM121BA6NF01 834 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 EEF1E1-BLOC1S5C9J1V9 151 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 GABARAPH6UMI1 98 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 ICOSLGO75144 302 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 RHOP08100 348 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 EPCAMP16422 314 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 PCSK2P16519 638 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 CNR1P21554 472 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 ADH6P28332 368 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 PRLHRP49683 370 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 NANOS3P60323 173 aaKnown RBP12.63□□□□□ -0.39
SCARB2-227ENST00000640957 RPS11P62280 158 aaKnown RBP eCLIP12.63□□□□□ -0.39
SCARB2-227ENST00000640957 C9orf152Q5JTZ5 239 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 FAM46CQ5VWP2 391 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 GLT8D1Q68CQ7 371 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 RAB11FIP2Q7L804 512 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 CHRDQ9H2X0 955 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 POFUT1Q9H488 388 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 IGFLR1Q9H665 355 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 ST6GALNAC2Q9UJ37 374 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 NPFFR2Q9Y5X5 522 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 SSX5O60225 188 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 DNAJB6O75190 326 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 ACTL6AO96019 429 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 PPT1P50897 306 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 ZNF600Q6ZNG1 722 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 KCTD9Q7L273 389 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 MCATQ8IVS2 390 aaKnown RBP12.62□□□□□ -0.39
SCARB2-227ENST00000640957 ZSCAN1Q8NBB4 408 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 OR51A4Q8NGJ6 313 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 PHOSPHO1Q8TCT1 267 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 BPIFA2Q96DR5 249 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 NMNAT3Q96T66 252 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 C1QTNF2Q9BXJ5 285 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 HRH4Q9H3N8 390 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 GSN-AS1Q9NRJ2 163 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 FOXJ3Q9UPW0 622 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 WDR45Q9Y484 360 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 TRAV14DV4A0A0A6YYC5 116 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 OR2A4O95047 310 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 NDUFB6O95139 128 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 PAK4O96013 591 aaPredicted RBP12.62□□□□□ -0.39
SCARB2-227ENST00000640957 OR8G3PP0DMU2 310 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 CTSAP10619 480 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 DAOP14920 347 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 AK4P27144 223 aaPredicted RBP12.62□□□□□ -0.39
SCARB2-227ENST00000640957 HTR2AP28223 471 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 HAAOP46952 286 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 OR4C11Q6IEV9 310 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 MRGPREQ86SM8 312 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 CD163Q86VB7 1156 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 GID4Q8IVV7 300 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 ZNF689Q96CS4 500 aaPredicted RBP12.62□□□□□ -0.39
SCARB2-227ENST00000640957 Q96M85 177 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 OR2A7Q96R45 310 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 WDR77Q9BQA1 342 aaPredicted RBP12.62□□□□□ -0.39
SCARB2-227ENST00000640957 AIF1LQ9BQI0 150 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 ZDHHC5Q9C0B5 715 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 BIN3Q9NQY0 253 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 ABRACLQ9P1F3 81 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 KLHL42Q9P2K6 505 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 ENTPD4Q9Y227 616 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 PLXNB3Q9ULL4 1909 aa12.62□□□□□ -0.39
SCARB2-227ENST00000640957 C13orf42A0A1B0GVH6 325 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 KANTRA0A1W2PQU2 76 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 CPED1A4D0V7 1026 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 BHLHE40O14503 412 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 PRAF2O60831 178 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 RBBP9O75884 186 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 ARL6IP5O75915 188 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 ZFPL1O95159 310 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 GPANK1O95872 356 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 ANXA2P07355 339 aaKnown RBP12.61□□□□□ -0.39
SCARB2-227ENST00000640957 MPGP29372 298 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 RPL4P36578 427 aaKnown RBP12.61□□□□□ -0.39
SCARB2-227ENST00000640957 PRMT2P55345 433 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 ACSM1Q08AH1 577 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 ZNF234Q14588 700 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 ZNF528Q3MIS6 628 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 AMZ1Q400G9 498 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 TMEM205Q6UW68 189 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 PARS2Q7L3T8 475 aaKnown RBP12.61□□□□□ -0.39
SCARB2-227ENST00000640957 FAM71CQ8NEG0 241 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 TMEM239Q8WW34 195 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 RGP1Q92546 391 aaPredicted RBP12.61□□□□□ -0.39
SCARB2-227ENST00000640957 C20orf24Q9BUV8 137 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 NRIP3Q9NQ35 241 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 PRR13Q9NZ81 148 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 DPP7Q9UHL4 492 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 HS3ST2Q9Y278 367 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms