RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	PVALB	P20472	110 aa	Predicted RBP	10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	CDK2	P24941	298 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	MC3R	P41968	323 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	PDX1	P52945	283 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	ERVFC1	P60507	584 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	SERTAD2	Q14140	314 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	INSL4	Q14641	139 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	TCEA2	Q15560	299 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	HFE	Q30201	348 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	PLPP4	Q5VZY2	271 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	C11orf87	Q6NUJ2	197 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	HAGHL	Q6PII5	290 aa	Predicted RBP	10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	ALKAL2	Q6UX46	152 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	STAC2	Q6ZMT1	411 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	ZNF793	Q6ZN11	406 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	PARS2	Q7L3T8	475 aa	Known RBP	10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	DGLUCY	Q7Z3D6	616 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	MMP21	Q8N119	569 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	BEST3	Q8N1M1	668 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	COMMD1	Q8N668	190 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	LILRA3	Q8N6C8	439 aa	Predicted RBP	10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	OR4E2	Q8NGC2	313 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	OR4D10	Q8NGI6	311 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	OR5AR1	Q8NGP9	310 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	OR2A1	Q8NGT9	310 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	AUTS2	Q8WXX7	1259 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	PMEPA1	Q969W9	287 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	FOXRED1	Q96CU9	486 aa	Predicted RBP	10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	CXorf58	Q96LI9	332 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	SCGB3A2	Q96PL1	93 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	CHIA	Q9BZP6	476 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	KIR3DX1	Q9H7L2	352 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	AUNIP	Q9H7T9	357 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	TUBA4B	Q9H853	241 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	RNF122	Q9H9V4	155 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	ZFP57	Q9NU63	452 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	TMEM100	Q9NV29	134 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	SHPK	Q9UHJ6	478 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	CLEC4E	Q9ULY5	219 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	GPR55	Q9Y2T6	319 aa	Predicted RBP	10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	AK6	Q9Y3D8	172 aa	Known RBP	10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	ZNF337	Q9Y3M9	751 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	PCDHGA5	Q9Y5G8	931 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	COLEC10	Q9Y6Z7	277 aa		10.78	□□□□□ -0.68
U2AF1L4-221	ENST00000601236	TBC1D3I	A0A087WXS9	549 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	LOC100289279	A0A1B0GTE1	492 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	FAM183A	A6NL82	134 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236		F8VVB4	439 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236		F8VWA3	439 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	PYCARD-AS1	I3L0S3	204 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	TAAR5	O14804	337 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	GATC	O43716	136 aa	Known RBP	10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	PRICKLE3	O43900	615 aa	Predicted RBP	10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	BNIP3L	O60238	219 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	LCMT2	O60294	686 aa	Known RBP	10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	BRINP1	O60477	761 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	CD74	P04233	296 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	S100A6	P06703	90 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	PET100	P0DJ07	73 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	C6	P13671	934 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	SPI1	P17947	270 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	RAB6A	P20340	208 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	MAK	P20794	623 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	TACR3	P29371	465 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	CX3CR1	P49238	355 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	MEOX2	P50222	304 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	SLC16A1	P53985	500 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	RAB5B	P61020	215 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	LTB	Q06643	244 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	BIK	Q13323	160 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	ALKBH1	Q13686	389 aa	Known RBP	10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	STK11	Q15831	433 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	PCGF3	Q3KNV8	242 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	AVPI1	Q5T686	147 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	ZNF425	Q6IV72	752 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	LMNTD1	Q8N9Z9	388 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	CLEC1A	Q8NC01	280 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	SLC30A7	Q8NEW0	376 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	VN1R2	Q8NFZ6	395 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	OR5AK2	Q8NH90	309 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	THAP6	Q8TBB0	222 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	PXYLP1	Q8TE99	480 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	GPX8	Q8TED1	209 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	ZFPM2	Q8WW38	1151 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	ART5	Q96L15	291 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	OR14A2	Q96R54	314 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	ENKD1	Q9H0I2	346 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	EXOSC3	Q9NQT5	275 aa	Known RBP	10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	MMP26	Q9NRE1	261 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	CA10	Q9NS85	328 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	RXFP3	Q9NSD7	469 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	ZNF629	Q9UEG4	869 aa	Predicted RBP	10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	GPR160	Q9UJ42	338 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	ATG4B	Q9Y4P1	393 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	ENTPD2	Q9Y5L3	495 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	HELZ	P42694	1942 aa	Known RBP	10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	DENND4C	Q5VZ89	1909 aa		10.77	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	OR5H14	A6NHG9	310 aa		10.76	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	SLC17A2	O00624	439 aa		10.76	□□□□□ -0.69
U2AF1L4-221	ENST00000601236	LILRB3	O75022	631 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms