RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 CRMP1Q14194 572 aa15.92■□□□□ 0.14
SHKBP1-224ENST00000600718 SYT6Q5T7P8 510 aaPredicted RBP15.92■□□□□ 0.14
SHKBP1-224ENST00000600718 AGAP7PQ5VUJ5 663 aa15.92■□□□□ 0.14
SHKBP1-224ENST00000600718 UBE2UQ5VVX9 321 aa15.92■□□□□ 0.14
SHKBP1-224ENST00000600718 SLC6A19Q695T7 634 aa15.92■□□□□ 0.14
SHKBP1-224ENST00000600718 SPINK14Q6IE38 97 aa15.92■□□□□ 0.14
SHKBP1-224ENST00000600718 FAM122BQ7Z309 247 aa15.92■□□□□ 0.14
SHKBP1-224ENST00000600718 BBS1Q8NFJ9 593 aa15.92■□□□□ 0.14
SHKBP1-224ENST00000600718 OR52I1Q8NGK6 324 aa15.92■□□□□ 0.14
SHKBP1-224ENST00000600718 OR4K13Q8NH42 304 aa15.92■□□□□ 0.14
SHKBP1-224ENST00000600718 LGALS12Q96DT0 336 aa15.92■□□□□ 0.14
SHKBP1-224ENST00000600718 DNAJA3Q96EY1 480 aa15.92■□□□□ 0.14
SHKBP1-224ENST00000600718 ARL5BQ96KC2 179 aa15.92■□□□□ 0.14
SHKBP1-224ENST00000600718 AGAP4Q96P64 663 aa15.92■□□□□ 0.14
SHKBP1-224ENST00000600718 KLHL1Q9NR64 748 aa15.92■□□□□ 0.14
SHKBP1-224ENST00000600718 WARS2Q9UGM6 360 aaKnown RBP15.92■□□□□ 0.14
SHKBP1-224ENST00000600718 PLPP3O14495 311 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 ATP6V1G1O75348 118 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 OR6A2O95222 327 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 RAB36O95755 333 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 WDPCPO95876 746 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 PRKAR1AP10644 381 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 DCKP27707 260 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 SRSF6Q13247 344 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 ARMC4Q5T2S8 1044 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 GPR139Q6DWJ6 353 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 NIPAL3Q6P499 406 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 LINC00696Q6ZRV3 163 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 SCAIQ8N9R8 606 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 OR5M1Q8NGP8 315 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 MED20Q9H944 212 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 DIMT1Q9UNQ2 313 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 AHCTF1Q8WYP5 2266 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 A0A0G2JMM0 328 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 A0A1W2PPB8 328 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 A0A1W2PRS3 328 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 KIR3DP1A8MWS1 328 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 H3BML4 177 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 F10P00742 488 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 F13BP05160 661 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 ADORA3P0DMS8 318 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 ZNF17P17021 662 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 TCEA1P23193 301 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 SDHAP31040 664 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 SRD5A2P31213 254 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 CD97P48960 835 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 FOXK1P85037 733 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 ZP4Q12836 540 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 OR1C1Q15619 314 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 OR7A5Q15622 319 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 ZBTB8BQ8NAP8 495 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 SIGLEC12Q96PQ1 595 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 FAM173AQ9BQD7 235 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 INIPQ9NRY2 104 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 DEPPQ9NTK1 212 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 GRHPRQ9UBQ7 328 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 POLHQ9Y253 713 aa15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 EXOGQ9Y2C4 368 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 MRPS18CQ9Y3D5 142 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-224ENST00000600718 LIPT2A6NK58 231 aa15.9■□□□□ 0.14
SHKBP1-224ENST00000600718 SLC22A31A6NKX4 558 aa15.9■□□□□ 0.14
SHKBP1-224ENST00000600718 ZNF891A8MT65 544 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-224ENST00000600718 M0R082 166 aa15.9■□□□□ 0.14
SHKBP1-224ENST00000600718 FZD7O75084 574 aa15.9■□□□□ 0.14
SHKBP1-224ENST00000600718 WT1P19544 449 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-224ENST00000600718 GTF2E2P29084 291 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-224ENST00000600718 GP2P55259 537 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-224ENST00000600718 H1FNTQ75WM6 255 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-224ENST00000600718 CYB561A3Q8NBI2 242 aa15.9■□□□□ 0.14
SHKBP1-224ENST00000600718 NPEPL1Q8NDH3 523 aa15.9■□□□□ 0.14
SHKBP1-224ENST00000600718 SDR9C7Q8NEX9 313 aa15.9■□□□□ 0.14
SHKBP1-224ENST00000600718 ZNF417Q8TAU3 575 aa15.9■□□□□ 0.14
SHKBP1-224ENST00000600718 Q96M85 177 aa15.9■□□□□ 0.14
SHKBP1-224ENST00000600718 ZNF587Q96SQ5 575 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-224ENST00000600718 HCAR1Q9BXC0 346 aa15.9■□□□□ 0.14
SHKBP1-224ENST00000600718 ZFP64Q9NPA5 681 aa15.9■□□□□ 0.14
SHKBP1-224ENST00000600718 PLA2G3Q9NZ20 509 aa15.9■□□□□ 0.14
SHKBP1-224ENST00000600718 BOKQ9UMX3 212 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-224ENST00000600718 RPH3AQ9Y2J0 694 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-224ENST00000600718 HDGFL3Q9Y3E1 203 aa15.9■□□□□ 0.14
SHKBP1-224ENST00000600718 TEX13CA0A0J9YWL9 993 aa15.89■□□□□ 0.13
SHKBP1-224ENST00000600718 A6NL46 340 aa15.89■□□□□ 0.13
SHKBP1-224ENST00000600718 RNF13O43567 381 aa15.89■□□□□ 0.13
SHKBP1-224ENST00000600718 ADRA2AP08913 450 aa15.89■□□□□ 0.13
SHKBP1-224ENST00000600718 MYBPHQ13203 477 aa15.89■□□□□ 0.13
SHKBP1-224ENST00000600718 KLHL12Q53G59 568 aa15.89■□□□□ 0.13
SHKBP1-224ENST00000600718 CLVS1Q8IUQ0 354 aaPredicted RBP15.89■□□□□ 0.13
SHKBP1-224ENST00000600718 ZNF248Q8NDW4 579 aa15.89■□□□□ 0.13
SHKBP1-224ENST00000600718 RASD2Q96D21 266 aa15.89■□□□□ 0.13
SHKBP1-224ENST00000600718 DDOQ99489 341 aa15.89■□□□□ 0.13
SHKBP1-224ENST00000600718 TEAD3Q99594 435 aa15.89■□□□□ 0.13
SHKBP1-224ENST00000600718 PIGQQ9BRB3 760 aa15.89■□□□□ 0.13
SHKBP1-224ENST00000600718 OR51V1Q9H2C8 321 aa15.89■□□□□ 0.13
SHKBP1-224ENST00000600718 ALKBH4Q9NXW9 302 aa15.89■□□□□ 0.13
SHKBP1-224ENST00000600718 SEC14L4Q9UDX3 406 aa15.89■□□□□ 0.13
SHKBP1-224ENST00000600718 ERGIC3Q9Y282 383 aa15.89■□□□□ 0.13
SHKBP1-224ENST00000600718 RIF1Q5UIP0 2472 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-224ENST00000600718 LRRC3CA6NJW4 275 aa15.89■□□□□ 0.13
SHKBP1-224ENST00000600718 C11orf98E9PRG8 122 aa15.89■□□□□ 0.13
SHKBP1-224ENST00000600718 MAGEB3O15480 346 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms