RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 LOC110117498-PIK3R3F6TDL0 507 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 J3QKU1 62 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 CD5LO43866 347 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 OR4F21O95013 312 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 MPZL1O95297 269 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 TRIM16O95361 564 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 STAMBPO95630 424 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 BAG2O95816 211 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 TGFAP01135 160 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 BGLAPP02818 100 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 ARF4P18085 180 aaPredicted RBP0.8□□□□□ -2.28
CCDC93-209ENST00000488908 ADRA1AP35348 466 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 KIR3DL2P43630 455 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 GPM6AP51674 278 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 PLA2G16P53816 162 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 HSPA2P54652 639 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 PKNOX1P55347 436 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 SPP2Q13103 211 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 PDK1Q15118 436 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 IRF4Q15306 451 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 SGCAQ16586 387 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 RSPO1Q2MKA7 263 aaPredicted RBP0.8□□□□□ -2.28
CCDC93-209ENST00000488908 BCL7AQ4VC05 210 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 FAM71F2Q6NXP2 309 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 CES3Q6UWW8 571 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 FAM92BQ6ZTR7 304 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 NLRP9Q7RTR0 991 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 CATSPER4Q7RTX7 472 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 MOB3BQ86TA1 216 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 ACOT1Q86TX2 421 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 DENND6BQ8NEG7 585 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 STXBP6Q8NFX7 210 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 OR4K14Q8NGD5 310 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 OR4D9Q8NGE8 314 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 OR10G4Q8NGN3 311 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 OR5W2Q8NH69 310 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 ACOT11Q8WXI4 607 aaPredicted RBP0.8□□□□□ -2.28
CCDC93-209ENST00000488908 FGF11Q92914 225 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 SH3YL1Q96HL8 342 aaPredicted RBP0.8□□□□□ -2.28
CCDC93-209ENST00000488908 ITCHQ96J02 903 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 CCT7Q99832 543 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 TUBGCP2Q9BSJ2 902 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 SLC40A1Q9NP59 571 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 ZNRD1Q9P1U0 126 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 GNG12Q9UBI6 72 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 ZNF629Q9UEG4 869 aaPredicted RBP0.8□□□□□ -2.28
CCDC93-209ENST00000488908 MOSPD1Q9UJG1 213 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 ZNF222Q9UK12 451 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 STAP1Q9ULZ2 295 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 CHMP2BQ9UQN3 213 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 GSTK1Q9Y2Q3 226 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 AK6Q9Y3D8 172 aaKnown RBP0.8□□□□□ -2.28
CCDC93-209ENST00000488908 FRMPD3Q5JV73 1810 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 SHANK1Q9Y566 2161 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 IGLV1-50A0A075B6I6 118 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 ARPC4-TTLL3A0A0A6YYG9 625 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 C12orf77C9JDV5 145 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 ZNF878C9JN71 531 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 INS-IGF2F8WCM5 200 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 SDHDO14521 159 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 RBFOX2O43251 390 aaKnown RBP eCLIP0.79□□□□□ -2.28
CCDC93-209ENST00000488908 SRP72O76094 671 aaKnown RBP0.79□□□□□ -2.28
CCDC93-209ENST00000488908 SLC25A14O95258 325 aaPredicted RBP0.79□□□□□ -2.28
CCDC93-209ENST00000488908 ADRA2AP08913 450 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 TLX1NBP0CAT3 122 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 SMIM10L1P0DMW3 83 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 ZNF30P17039 623 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 POLR2EP19388 210 aaKnown RBP0.79□□□□□ -2.28
CCDC93-209ENST00000488908 IL10P22301 178 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 DNAJB1P25685 340 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 HTR2AP28223 471 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 CCND2P30279 289 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 HPCAL1P37235 193 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 MXD4Q14582 209 aaPredicted RBP0.79□□□□□ -2.28
CCDC93-209ENST00000488908 MESDQ14696 234 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 GUCA2BQ16661 112 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 TTLL9Q3SXZ7 439 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 AFTPHQ6ULP2 937 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 CLEC4FQ8N1N0 589 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 LRRC43Q8N309 656 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 MRPL43Q8N983 215 aaKnown RBP0.79□□□□□ -2.28
CCDC93-209ENST00000488908 GATSQ8NAP1 163 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 DNAJC19Q96DA6 116 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 PDXPQ96GD0 296 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 SMIM10Q96HG1 83 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 C7orf34Q96L11 122 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 KCNK16Q96T55 309 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 KLF6Q99612 283 aaPredicted RBP0.79□□□□□ -2.28
CCDC93-209ENST00000488908 MRPL13Q9BYD1 178 aaKnown RBP0.79□□□□□ -2.28
CCDC93-209ENST00000488908 RAB34Q9BZG1 259 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 ZFP14Q9HCL3 533 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 ZNF355PQ9NSJ1 428 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 SEC14L3Q9UDX4 400 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 CD84Q9UIB8 345 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
CCDC93-209ENST00000488908 NSG1A0A0A6YYJ2 146 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 RBMY1BA6NDE4 496 aaKnown RBP0.78□□□□□ -2.28
CCDC93-209ENST00000488908 RBMY1EA6NEQ0 496 aaKnown RBP0.78□□□□□ -2.28
CCDC93-209ENST00000488908 F5H6K3 240 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 TAPBPO15533 448 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms