RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 PNPOQ9NVS9 261 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 PIH1D1Q9NWS0 290 aaKnown RBP4.03□□□□□ -1.76
SDCBP-205ENST00000447267 MYEF2Q9P2K5 600 aaKnown RBP4.03□□□□□ -1.76
SDCBP-205ENST00000447267 FZR1Q9UM11 496 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 SMAD5-AS1Q9Y6J3 95 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 A0A0U1RQK1 487 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 AGAP5A6NIR3 686 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 VSTM5A8MXK1 200 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 RNASEK-C17orf49H0YIS7 233 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 M0QX08 132 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 M0R233 179 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 TNFRSF13BO14836 293 aaPredicted RBP4.02□□□□□ -1.77
SDCBP-205ENST00000447267 PAHP00439 452 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 S100BP04271 92 aaPredicted RBP4.02□□□□□ -1.77
SDCBP-205ENST00000447267 IGKV2-30P06310 120 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 ITGA5P08648 1049 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 CT62P0C5K7 136 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 FRMD6-AS1P0C7T7 363 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 GZMAP12544 262 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 NAGAP17050 411 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 PPIFP30405 207 aaKnown RBP4.02□□□□□ -1.77
SDCBP-205ENST00000447267 ALDH9A1P49189 494 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 CENPAP49450 140 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 DYNLT1P63172 113 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 MRPS11P82912 194 aaKnown RBP4.02□□□□□ -1.77
SDCBP-205ENST00000447267 ACVR1Q04771 509 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 RNPS1Q15287 305 aaKnown RBP4.02□□□□□ -1.77
SDCBP-205ENST00000447267 TRIP13Q15645 432 aaPredicted RBP4.02□□□□□ -1.77
SDCBP-205ENST00000447267 TMEM44Q2T9K0 475 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 HSP90AA4PQ58FG1 418 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 BEND6Q5SZJ8 279 aaPredicted RBP4.02□□□□□ -1.77
SDCBP-205ENST00000447267 TEDDM1Q5T9Z0 273 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 FBXW9Q5XUX1 488 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 RGS7BPQ6MZT1 257 aaPredicted RBP4.02□□□□□ -1.77
SDCBP-205ENST00000447267 TMEM53Q6P2H8 277 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 CCDC121Q6ZUS5 278 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 Q6ZWC4 215 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 TRABD2AQ86V40 505 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 VSIG1Q86XK7 387 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 TRIML2Q8N7C3 387 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 OR52E4Q8NGH9 312 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 TRPC4APQ8TEL6 797 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 CCT6BQ92526 530 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 RAB1CQ92928 201 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 SLC35A4Q96G79 324 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 MAELQ96JY0 434 aaKnown RBP4.02□□□□□ -1.77
SDCBP-205ENST00000447267 ANKRD27Q96NW4 1050 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 BIRC8Q96P09 236 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 SLC38A2Q96QD8 506 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 PSD2Q9BQI7 771 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 RTN4RQ9BZR6 473 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 YIPF3Q9GZM5 350 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 EHD1Q9H4M9 534 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 C10orf88Q9H8K7 445 aa4.02□□□□□ -1.77
SDCBP-205ENST00000447267 NDRG4Q9ULP0 352 aaKnown RBP4.02□□□□□ -1.77
SDCBP-205ENST00000447267 LRIT2A6NDA9 550 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 TMEM247A6NEH6 219 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 SDR42E2A6NKP2 422 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 ALG1L2C9J202 215 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 ANKRD65E5RJM6 399 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 DOK2O60496 412 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 RAMP3O60896 148 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 SBK2P0C263 348 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 CECR9P0C854 216 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 PABPC4LP0CB38 370 aaKnown RBP4.01□□□□□ -1.77
SDCBP-205ENST00000447267 MYBL1P10243 752 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 THRBP10828 461 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 UBL4AP11441 157 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 GPX3P22352 226 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 SFTPDP35247 375 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 KIR2DS4P43632 304 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 PRPS1P60891 318 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 BASP1P80723 227 aaKnown RBP4.01□□□□□ -1.77
SDCBP-205ENST00000447267 PLIN5Q00G26 463 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 DHX34Q14147 1143 aaKnown RBP4.01□□□□□ -1.77
SDCBP-205ENST00000447267 PGS1Q32NB8 556 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 ADPRMQ3LIE5 342 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 HIKESHIQ53FT3 197 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 CFAP157Q5JU67 520 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 OR7E24Q6IFN5 339 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 KRT80Q6KB66 452 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 NEPROQ6NW34 567 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 CYHR1Q6ZMK1 362 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 ZNF571Q7Z3V5 609 aaPredicted RBP4.01□□□□□ -1.77
SDCBP-205ENST00000447267 MYPOPQ86VE0 399 aaPredicted RBP4.01□□□□□ -1.77
SDCBP-205ENST00000447267 RFX6Q8HWS3 928 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 CCDC50Q8IVM0 306 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 ZNF615Q8N8J6 731 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 PNLDC1Q8NA58 520 aaKnown RBP4.01□□□□□ -1.77
SDCBP-205ENST00000447267 C17orf47Q8NEP4 570 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 TRPV3Q8NET8 790 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 NUP37Q8NFH4 326 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 OR4F15Q8NGB8 312 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 OR4L1Q8NH43 312 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 C8orf46Q8TAG6 207 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.01□□□□□ -1.77
SDCBP-205ENST00000447267 DUSP19Q8WTR2 217 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 IPCEF1Q8WWN9 437 aaPredicted RBP4.01□□□□□ -1.77
SDCBP-205ENST00000447267 TMBIM1Q969X1 311 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 TMCO6Q96DC7 493 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms