RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 ZNF311Q5JNZ3 666 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 FGD3Q5JSP0 725 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 DCST2Q5T1A1 773 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 C6orf52Q5T4I8 152 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 PRAMEF8Q5VWM4 474 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 MLIPQ5VWP3 458 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 PRAMEF7Q5VXH5 474 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 TCEAL6Q6IPX3 200 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 JMJD6Q6NYC1 403 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 SHQ1Q6PI26 577 aaKnown RBP3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 QSOX2Q6ZRP7 698 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 PLEKHM3Q6ZWE6 761 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 HMGN2P46Q86SG4 172 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 CARM1Q86X55 608 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 PRSS58Q8IYP2 241 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZNF619Q8N2I2 560 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 OR2L13Q8N349 312 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZNF614Q8N883 585 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 SETD9Q8NE22 299 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 DNAAF1Q8NEP3 725 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 OR52P1PQ8NH57 321 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 MIPOL1Q8TD10 442 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 GPR151Q8TDV0 419 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 DOK4Q8TEW6 326 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 GIPC3Q8TF64 312 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 PHF10Q8WUB8 498 aaKnown RBP3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 TCEAL3Q969E4 200 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 ANKRD9Q96BM1 317 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZNF501Q96CX3 271 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 RMND5BQ96G75 393 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 C16orf58Q96GQ5 468 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZNF354BQ96LW1 612 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZNF597Q96LX8 424 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZNF578Q96N58 590 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 RDH12Q96NR8 316 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 TRNT1Q96Q11 434 aaKnown RBP3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZNF300Q96RE9 604 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 NR1H4Q96RI1 486 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 STACQ99469 402 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 EPYCQ99645 322 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 TREX2Q9BQ50 279 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 OSBPL10Q9BXB5 764 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 PINK1Q9BXM7 581 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 STRADBQ9C0K7 418 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 GABARAPL1Q9H0R8 117 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 ING2Q9H160 280 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 PIGUQ9H490 435 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 RIBC2Q9H4K1 309 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 ARMC7Q9H6L4 198 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 FOLH1BQ9HBA9 442 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 BCL2L10Q9HD36 194 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 MKKSQ9NPJ1 570 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 PNO1Q9NRX1 252 aaKnown RBP3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 KRT84Q9NSB2 600 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 C14orf105Q9NVL8 296 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 GIN1Q9NXP7 522 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 PDP1Q9P0J1 537 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 COPS7AQ9UBW8 275 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 PRODH2Q9UF12 536 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 ENOPH1Q9UHY7 261 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 KCNG2Q9UJ96 466 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 C3orf18Q9UK00 162 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 TMCC3Q9ULS5 477 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 SATB2Q9UPW6 733 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 ERVK-11Q9UQG0 969 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 CFL2Q9Y281 166 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZNF443Q9Y2A4 671 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 SH3GLB1Q9Y371 365 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 OR10H1Q9Y4A9 318 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 LRRC42Q9Y546 428 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 ENPP4Q9Y6X5 453 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 R4GN57 208 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 COL27A1Q8IZC6 1860 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 NUP214P35658 2090 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 EXPH5Q8NEV8 1989 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 SAA2-SAA4A0A096LPE2 208 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 NPIPA5A0A0B4J1W7 369 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 A0A1W2PQM1 296 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 LNP1A1A4G5 178 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 TTC36A6NLP5 189 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 EIF4E1BA6NMX2 242 aaKnown RBP3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 A8MUA0 341 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 C9J4A7 227 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 NPIPA7E9PJI5 369 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 FAAHO00519 579 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 BCKDKO14874 412 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 TIMM23O14925 209 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 POLR1CO15160 346 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 DENRO43583 198 aaKnown RBP3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 PIP5K1CO60331 668 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 PLOD3O60568 738 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 NME6O75414 186 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 STX11O75558 287 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 JRKO75564 520 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 CCNB2O95067 398 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 MFN2O95140 757 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 GAS8-AS1O95177 125 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 TNFAIP8O95379 198 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms