RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 PANX1Q96RD7 426 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 ZBTB18Q99592 522 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 C1QTNF5Q9BXJ0 243 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.68□□□□□ -0.22
DDX55-202ENST00000354291 SLC9A8Q9Y2E8 581 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 WNK2Q9Y3S1 2297 aa13.67□□□□□ -0.22
DDX55-202ENST00000354291 TMEM120BA0PK00 339 aa13.67□□□□□ -0.22
DDX55-202ENST00000354291 CCDC154A6NI56 674 aa13.67□□□□□ -0.22
DDX55-202ENST00000354291 HMGN4O00479 90 aa13.67□□□□□ -0.22
DDX55-202ENST00000354291 NR5A2O00482 541 aa13.67□□□□□ -0.22
DDX55-202ENST00000354291 SNNO75324 88 aaPredicted RBP13.67□□□□□ -0.22
DDX55-202ENST00000354291 KRT33AO76009 404 aa13.67□□□□□ -0.22
DDX55-202ENST00000354291 PMS2P2O95744 297 aa13.67□□□□□ -0.22
DDX55-202ENST00000354291 IGFBP1P08833 259 aaPredicted RBP13.67□□□□□ -0.22
DDX55-202ENST00000354291 CCNA2P20248 432 aa13.67□□□□□ -0.22
DDX55-202ENST00000354291 NME5P56597 212 aa13.67□□□□□ -0.22
DDX55-202ENST00000354291 WDR4P57081 412 aaKnown RBP13.67□□□□□ -0.22
DDX55-202ENST00000354291 FUT5Q11128 374 aa13.67□□□□□ -0.22
DDX55-202ENST00000354291 TBRG1Q3YBR2 411 aa13.67□□□□□ -0.22
DDX55-202ENST00000354291 ZNF311Q5JNZ3 666 aa13.67□□□□□ -0.22
DDX55-202ENST00000354291 ZNF621Q6ZSS3 439 aa13.67□□□□□ -0.22
DDX55-202ENST00000354291 ARFGAP2Q8N6H7 521 aa13.67□□□□□ -0.22
DDX55-202ENST00000354291 GLB1L3Q8NCI6 653 aaPredicted RBP13.67□□□□□ -0.22
DDX55-202ENST00000354291 PMM1Q92871 262 aa13.67□□□□□ -0.22
DDX55-202ENST00000354291 ZG16BQ96DA0 208 aa13.67□□□□□ -0.22
DDX55-202ENST00000354291 TRNT1Q96Q11 434 aaKnown RBP13.67□□□□□ -0.22
DDX55-202ENST00000354291 OR11A1Q9GZK7 315 aa13.67□□□□□ -0.22
DDX55-202ENST00000354291 SEC61A2Q9H9S3 476 aa13.67□□□□□ -0.22
DDX55-202ENST00000354291 OBP2BQ9NPH6 170 aa13.67□□□□□ -0.22
DDX55-202ENST00000354291 EXOSC3Q9NQT5 275 aaKnown RBP13.67□□□□□ -0.22
DDX55-202ENST00000354291 CTPS2Q9NRF8 586 aa13.67□□□□□ -0.22
DDX55-202ENST00000354291 TMEM45AQ9NWC5 275 aa13.67□□□□□ -0.22
DDX55-202ENST00000354291 MED29Q9NX70 200 aa13.67□□□□□ -0.22
DDX55-202ENST00000354291 FLVCR1Q9Y5Y0 555 aa13.67□□□□□ -0.22
DDX55-202ENST00000354291 GPR45Q9Y5Y3 372 aa13.67□□□□□ -0.22
DDX55-202ENST00000354291 TCN1P20061 433 aaPredicted RBP13.66□□□□□ -0.22
DDX55-202ENST00000354291 EPHA3P29320 983 aa13.66□□□□□ -0.22
DDX55-202ENST00000354291 RYKP34925 604 aa13.66□□□□□ -0.22
DDX55-202ENST00000354291 CLK1P49759 484 aaKnown RBP13.66□□□□□ -0.22
DDX55-202ENST00000354291 MYBPC1Q00872 1141 aa13.66□□□□□ -0.22
DDX55-202ENST00000354291 ELFN2Q5R3F8 820 aa13.66□□□□□ -0.22
DDX55-202ENST00000354291 GRINAQ7Z429 371 aa13.66□□□□□ -0.22
DDX55-202ENST00000354291 C1QL2Q7Z5L3 287 aa13.66□□□□□ -0.22
DDX55-202ENST00000354291 RNF130Q86XS8 419 aa13.66□□□□□ -0.22
DDX55-202ENST00000354291 CMIPQ8IY22 773 aa13.66□□□□□ -0.22
DDX55-202ENST00000354291 NUP37Q8NFH4 326 aa13.66□□□□□ -0.22
DDX55-202ENST00000354291 NANPQ8TBE9 248 aa13.66□□□□□ -0.22
DDX55-202ENST00000354291 AURKBQ96GD4 344 aaPredicted RBP13.66□□□□□ -0.22
DDX55-202ENST00000354291 DUX5Q96PT3 197 aa13.66□□□□□ -0.22
DDX55-202ENST00000354291 CCDC106Q9BWC9 280 aa13.66□□□□□ -0.22
DDX55-202ENST00000354291 RACGAP1Q9H0H5 632 aa13.66□□□□□ -0.22
DDX55-202ENST00000354291 WDR55Q9H6Y2 383 aaPredicted RBP13.66□□□□□ -0.22
DDX55-202ENST00000354291 ZNF442Q9H7R0 627 aa13.66□□□□□ -0.22
DDX55-202ENST00000354291 MTHFD2LQ9H903 347 aaPredicted RBP13.66□□□□□ -0.22
DDX55-202ENST00000354291 SLC52A3Q9NQ40 469 aa13.66□□□□□ -0.22
DDX55-202ENST00000354291 NKIRAS1Q9NYS0 192 aa13.66□□□□□ -0.22
DDX55-202ENST00000354291 CHRNA9Q9UGM1 479 aa13.66□□□□□ -0.22
DDX55-202ENST00000354291 HDGFL3Q9Y3E1 203 aa13.66□□□□□ -0.22
DDX55-202ENST00000354291 A0A096LPE4 126 aa13.65□□□□□ -0.22
DDX55-202ENST00000354291 A0A1W2PPZ6 126 aa13.65□□□□□ -0.22
DDX55-202ENST00000354291 PRAMEF27A3QJZ7 478 aa13.65□□□□□ -0.22
DDX55-202ENST00000354291 OR6C65A6NJZ3 312 aa13.65□□□□□ -0.22
DDX55-202ENST00000354291 PPIHO43447 177 aaKnown RBP13.65□□□□□ -0.22
DDX55-202ENST00000354291 ERLIN1O75477 346 aa13.65□□□□□ -0.22
DDX55-202ENST00000354291 KRT75O95678 551 aa13.65□□□□□ -0.22
DDX55-202ENST00000354291 LGI1O95970 557 aa13.65□□□□□ -0.22
DDX55-202ENST00000354291 IL6P05231 212 aa13.65□□□□□ -0.22
DDX55-202ENST00000354291 KITP10721 976 aa13.65□□□□□ -0.22
DDX55-202ENST00000354291 IDO1P14902 403 aa13.65□□□□□ -0.22
DDX55-202ENST00000354291 ANPEPP15144 967 aa13.65□□□□□ -0.22
DDX55-202ENST00000354291 FPR2P25090 351 aa13.65□□□□□ -0.22
DDX55-202ENST00000354291 IL12AP29459 219 aa13.65□□□□□ -0.22
DDX55-202ENST00000354291 HTR3AP46098 478 aa13.65□□□□□ -0.22
DDX55-202ENST00000354291 LMO4P61968 165 aa13.65□□□□□ -0.22
DDX55-202ENST00000354291 GNA13Q14344 377 aa13.65□□□□□ -0.22
DDX55-202ENST00000354291 NXNQ6DKJ4 435 aa13.65□□□□□ -0.22
DDX55-202ENST00000354291 RBMS3Q6XE24 437 aaKnown RBP13.65□□□□□ -0.22
DDX55-202ENST00000354291 LRRC74BQ6ZQY2 392 aa13.65□□□□□ -0.22
DDX55-202ENST00000354291 AAED1Q7RTV5 226 aa13.65□□□□□ -0.22
DDX55-202ENST00000354291 MGARPQ8TDB4 240 aa13.65□□□□□ -0.22
DDX55-202ENST00000354291 NAA11Q9BSU3 229 aaPredicted RBP13.65□□□□□ -0.22
DDX55-202ENST00000354291 TMPRSS13Q9BYE2 586 aa13.65□□□□□ -0.22
DDX55-202ENST00000354291 NTN4Q9HB63 628 aa13.65□□□□□ -0.22
DDX55-202ENST00000354291 G6PC2Q9NQR9 355 aa13.65□□□□□ -0.22
DDX55-202ENST00000354291 REV1Q9UBZ9 1251 aa13.65□□□□□ -0.22
DDX55-202ENST00000354291 WNK1Q9H4A3 2382 aa13.65□□□□□ -0.22
DDX55-202ENST00000354291 AGAP5A6NIR3 686 aa13.64□□□□□ -0.23
DDX55-202ENST00000354291 RFXANKO14593 260 aa13.64□□□□□ -0.23
DDX55-202ENST00000354291 DNPH1O43598 174 aa13.64□□□□□ -0.23
DDX55-202ENST00000354291 SLC22A3O75751 556 aa13.64□□□□□ -0.23
DDX55-202ENST00000354291 HPXP02790 462 aa13.64□□□□□ -0.23
DDX55-202ENST00000354291 IL7RP16871 459 aa13.64□□□□□ -0.23
DDX55-202ENST00000354291 MAGOHP61326 146 aaKnown RBP13.64□□□□□ -0.23
DDX55-202ENST00000354291 SLC17A1Q14916 467 aa13.64□□□□□ -0.23
DDX55-202ENST00000354291 SYPL1Q16563 259 aa13.64□□□□□ -0.23
DDX55-202ENST00000354291 ACSM5Q6NUN0 579 aa13.64□□□□□ -0.23
DDX55-202ENST00000354291 ABHD12BQ7Z5M8 362 aaPredicted RBP13.64□□□□□ -0.23
DDX55-202ENST00000354291 LSRQ86X29 649 aaPredicted RBP13.64□□□□□ -0.23
DDX55-202ENST00000354291 ANKFN1Q8N957 763 aa13.64□□□□□ -0.23
DDX55-202ENST00000354291 POMGNT2Q8NAT1 580 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms