RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 EPPINO95925 133 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 RLN2P04090 185 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 S100A9P06702 114 aaKnown RBP12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 NDUFV2P19404 249 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 DRD1P21728 446 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 HNRNPA2B1P22626 353 aaKnown RBP12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 MPGP29372 298 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 ATP6V1E1P36543 226 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 ACTR1BP42025 376 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 GDI2P50395 445 aaKnown RBP12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 ACTR1AP61163 376 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 SSTP61278 116 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 MRPS10P82664 201 aaKnown RBP12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 MRPS21P82921 87 aaKnown RBP12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 E2F1Q01094 437 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 PIN1Q13526 163 aaPredicted RBP12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 IL10RAQ13651 578 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 CEBPEQ15744 281 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 RNASE12Q5GAN4 147 aaKnown RBP12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 UBE2NLQ5JXB2 153 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 NRROSQ86YC3 692 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 ACBD7Q8N6N7 88 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 OR10K1Q8NGX5 313 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 GLYATL2Q8WU03 294 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 THAP4Q8WY91 577 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 FCRL4Q96PJ5 515 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 GPA33Q99795 319 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 TWSG1Q9GZX9 223 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 EGLN3Q9H6Z9 239 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 FLVCR2Q9UPI3 526 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 DTX4Q9Y2E6 619 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 KCNE3Q9Y6H6 103 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 TRAV20A0A0B4J274 112 aa12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 RAB19A4D1S5 217 aa12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 CHURC1-FNTBB4DL54 471 aa12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 DISC1C4P0D8 188 aa12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 DVL2O14641 736 aa12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 NARSO43776 548 aaKnown RBP12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 TMEM127O75204 238 aa12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 KHDRBS3O75525 346 aaKnown RBP12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 ZNF888P0CJ79 500 aaPredicted RBP12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 MGMTP16455 207 aa12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 MPIP34949 423 aa12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 RAD52P43351 418 aa12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 PRR5P85299 388 aa12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 STX4Q12846 297 aa12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 KIR2DS3Q14952 304 aa12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 PRRT3Q5FWE3 981 aa12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 PRAMEF8Q5VWM4 474 aa12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 PRAMEF7Q5VXH5 474 aa12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 LRRN1Q6UXK5 716 aa12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 TMEM92Q6UXU6 159 aa12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 MOB3CQ70IA8 216 aa12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 SKA3Q8IX90 412 aa12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 OR9A2Q8NGT5 310 aa12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 ELP5Q8TE02 316 aa12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 SLC22A18Q96BI1 424 aa12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 TSNAXQ99598 290 aaKnown RBP12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 GSDMCQ9BYG8 508 aa12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 CACYBPQ9HB71 228 aaKnown RBP12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 BARX1Q9HBU1 254 aaPredicted RBP12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 NOX3Q9HBY0 568 aa12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 CTPS2Q9NRF8 586 aa12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 H2AFY2Q9P0M6 372 aaPredicted RBP12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 RCE1Q9Y256 329 aa12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 FANCMQ8IYD8 2048 aa12.84□□□□□ -0.35
RABGGTA-220ENST00000560998 TNFRSF10CO14798 259 aa12.83□□□□□ -0.35
RABGGTA-220ENST00000560998 SGCEO43556 437 aa12.83□□□□□ -0.35
RABGGTA-220ENST00000560998 MC3RP41968 323 aa12.83□□□□□ -0.35
RABGGTA-220ENST00000560998 PSMD4P55036 377 aaKnown RBP12.83□□□□□ -0.35
RABGGTA-220ENST00000560998 SNRPNP63162 240 aaKnown RBP12.83□□□□□ -0.35
RABGGTA-220ENST00000560998 ALG11Q2TAA5 492 aa12.83□□□□□ -0.35
RABGGTA-220ENST00000560998 SLC25A35Q3KQZ1 300 aa12.83□□□□□ -0.35
RABGGTA-220ENST00000560998 SFRP4Q6FHJ7 346 aaPredicted RBP12.83□□□□□ -0.35
RABGGTA-220ENST00000560998 FBXO42Q6P3S6 717 aa12.83□□□□□ -0.35
RABGGTA-220ENST00000560998 CEACAM19Q7Z692 300 aa12.83□□□□□ -0.35
RABGGTA-220ENST00000560998 HMGN2P46Q86SG4 172 aa12.83□□□□□ -0.35
RABGGTA-220ENST00000560998 NUP43Q8NFH3 380 aa12.83□□□□□ -0.35
RABGGTA-220ENST00000560998 OR5W2Q8NH69 310 aa12.83□□□□□ -0.35
RABGGTA-220ENST00000560998 PHYHIPLQ96FC7 376 aa12.83□□□□□ -0.35
RABGGTA-220ENST00000560998 OR7D2Q96RA2 312 aa12.83□□□□□ -0.35
RABGGTA-220ENST00000560998 ALG8Q9BVK2 526 aa12.83□□□□□ -0.35
RABGGTA-220ENST00000560998 ZNF768Q9H5H4 540 aaKnown RBP12.83□□□□□ -0.35
RABGGTA-220ENST00000560998 CLDND1Q9NY35 253 aa12.83□□□□□ -0.35
RABGGTA-220ENST00000560998 KLHL9Q9P2J3 617 aa12.83□□□□□ -0.35
RABGGTA-220ENST00000560998 ZNF780BQ9Y6R6 833 aa12.83□□□□□ -0.35
RABGGTA-220ENST00000560998 UNC80Q8N2C7 3258 aa12.83□□□□□ -0.36
RABGGTA-220ENST00000560998 SCN3AQ9NY46 2000 aa12.83□□□□□ -0.36
RABGGTA-220ENST00000560998 LRP4O75096 1905 aa12.83□□□□□ -0.36
RABGGTA-220ENST00000560998 FXYD6-FXYD2A0A087WZ82 144 aa12.83□□□□□ -0.36
RABGGTA-220ENST00000560998 GSAPA4D1B5 854 aa12.83□□□□□ -0.36
RABGGTA-220ENST00000560998 F5H5P2 479 aa12.83□□□□□ -0.36
RABGGTA-220ENST00000560998 TNFSF14O43557 240 aa12.83□□□□□ -0.36
RABGGTA-220ENST00000560998 MT-ND5P03915 603 aa12.83□□□□□ -0.36
RABGGTA-220ENST00000560998 ATP1B1P05026 303 aa12.83□□□□□ -0.36
RABGGTA-220ENST00000560998 CNR1P21554 472 aa12.83□□□□□ -0.36
RABGGTA-220ENST00000560998 MST1P26927 711 aa12.83□□□□□ -0.36
RABGGTA-220ENST00000560998 DCDP81605 110 aaKnown RBP12.83□□□□□ -0.36
RABGGTA-220ENST00000560998 TFF2Q03403 129 aa12.83□□□□□ -0.36
RABGGTA-220ENST00000560998 SMAD2Q15796 467 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms