RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 CXCL10P02778 98 aa16.17■□□□□ 0.18
RAB40C-205ENST00000539661 ADRB3P13945 408 aa16.17■□□□□ 0.18
RAB40C-205ENST00000539661 DDX6P26196 483 aaKnown RBP eCLIP16.17■□□□□ 0.18
RAB40C-205ENST00000539661 LGALS3BPQ08380 585 aa16.17■□□□□ 0.18
RAB40C-205ENST00000539661 PDSS1Q5T2R2 415 aa16.17■□□□□ 0.18
RAB40C-205ENST00000539661 OR7E24Q6IFN5 339 aa16.17■□□□□ 0.18
RAB40C-205ENST00000539661 GLB1L2Q8IW92 636 aa16.17■□□□□ 0.18
RAB40C-205ENST00000539661 OR2L8Q8NGY9 312 aa16.17■□□□□ 0.18
RAB40C-205ENST00000539661 FERD3LQ96RJ6 166 aa16.17■□□□□ 0.18
RAB40C-205ENST00000539661 MFFQ9GZY8 342 aa16.17■□□□□ 0.18
RAB40C-205ENST00000539661 MAGEB4O15481 346 aaPredicted RBP16.16■□□□□ 0.18
RAB40C-205ENST00000539661 GNRH1P01148 92 aa16.16■□□□□ 0.18
RAB40C-205ENST00000539661 H2AFB1P0C5Y9 115 aa16.16■□□□□ 0.18
RAB40C-205ENST00000539661 MGMTP16455 207 aa16.16■□□□□ 0.18
RAB40C-205ENST00000539661 CBX5P45973 191 aa16.16■□□□□ 0.18
RAB40C-205ENST00000539661 SCAND1P57086 179 aa16.16■□□□□ 0.18
RAB40C-205ENST00000539661 ERVFC1P60507 584 aa16.16■□□□□ 0.18
RAB40C-205ENST00000539661 TSSK4Q6SA08 328 aa16.16■□□□□ 0.18
RAB40C-205ENST00000539661 ARL14Q8N4G2 192 aa16.16■□□□□ 0.18
RAB40C-205ENST00000539661 OR6N1Q8NGY5 312 aa16.16■□□□□ 0.18
RAB40C-205ENST00000539661 C10orf90Q96M02 699 aa16.16■□□□□ 0.18
RAB40C-205ENST00000539661 SLC25A18Q9H1K4 315 aa16.16■□□□□ 0.18
RAB40C-205ENST00000539661 C6orf106Q9H6K1 298 aaPredicted RBP16.16■□□□□ 0.18
RAB40C-205ENST00000539661 SLC6A5Q9Y345 797 aa16.16■□□□□ 0.18
RAB40C-205ENST00000539661 GOSR2O14653 212 aa16.16■□□□□ 0.18
RAB40C-205ENST00000539661 LILRB3O75022 631 aa16.16■□□□□ 0.18
RAB40C-205ENST00000539661 RBBP9O75884 186 aa16.16■□□□□ 0.18
RAB40C-205ENST00000539661 GLSO94925 669 aaPredicted RBP16.16■□□□□ 0.18
RAB40C-205ENST00000539661 SIX6O95475 246 aa16.16■□□□□ 0.18
RAB40C-205ENST00000539661 PLATP00750 562 aa16.16■□□□□ 0.18
RAB40C-205ENST00000539661 C8AP07357 584 aa16.16■□□□□ 0.18
RAB40C-205ENST00000539661 MAOBP27338 520 aa16.16■□□□□ 0.18
RAB40C-205ENST00000539661 HOXA1P49639 335 aaPredicted RBP16.16■□□□□ 0.18
RAB40C-205ENST00000539661 FGL1Q08830 312 aa16.16■□□□□ 0.18
RAB40C-205ENST00000539661 STK11Q15831 433 aa16.16■□□□□ 0.18
RAB40C-205ENST00000539661 WFIKKN2Q8TEU8 576 aa16.16■□□□□ 0.18
RAB40C-205ENST00000539661 ZNF559Q9BR84 538 aa16.16■□□□□ 0.18
RAB40C-205ENST00000539661 SLC7A5P2Q9GIP4 190 aa16.16■□□□□ 0.18
RAB40C-205ENST00000539661 SLITRK2Q9H156 845 aa16.16■□□□□ 0.18
RAB40C-205ENST00000539661 GMEB2Q9UKD1 530 aa16.16■□□□□ 0.18
RAB40C-205ENST00000539661 RFPL4AA6NLU0 287 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 RFPL4AL1F8VTS6 287 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 H7C417 338 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 CSF1P09603 554 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 CCR2P41597 374 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 C2orf68Q2NKX9 166 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 KRT77Q7Z794 578 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 SLC35F3Q8IY50 421 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 OR52E2Q8NGJ4 325 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 PMM1Q92871 262 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 OTUB2Q96DC9 234 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 TNFRSF13CQ96RJ3 184 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 NKX6-2Q9C056 277 aaPredicted RBP16.15■□□□□ 0.18
RAB40C-205ENST00000539661 TMEM27Q9HBJ8 222 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 TM7SF3Q9NS93 570 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 RASL12Q9NYN1 266 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 MTFP1Q9UDX5 166 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 ACOD1A6NK06 481 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 TEX46H3BTG2 121 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 SPDEFO95238 335 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 RLN2P04090 185 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 RBM34P42696 430 aaKnown RBP16.15■□□□□ 0.18
RAB40C-205ENST00000539661 DIO1P49895 249 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 NTHL1P78549 312 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 PON3Q15166 354 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 LRRN1Q6UXK5 716 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 SPRED2Q7Z698 418 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 LILRB1Q8NHL6 650 aaPredicted RBP16.15■□□□□ 0.18
RAB40C-205ENST00000539661 TCEAL4Q96EI5 215 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 CHRNA9Q9UGM1 479 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 NDRG3Q9UGV2 375 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 APOBEC3BQ9UH17 382 aaKnown RBP16.15■□□□□ 0.18
RAB40C-205ENST00000539661 MYO9BQ13459 2157 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 GXYLT2A0PJZ3 443 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 AGTR1P30556 359 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 NAA10P41227 235 aaPredicted RBP16.15■□□□□ 0.18
RAB40C-205ENST00000539661 SLC35D3Q5M8T2 416 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 DND1Q8IYX4 353 aaKnown RBP16.15■□□□□ 0.18
RAB40C-205ENST00000539661 MFSD9Q8NBP5 474 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 OR10K1Q8NGX5 313 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 OR8D1Q8WZ84 308 aa16.15■□□□□ 0.18
RAB40C-205ENST00000539661 TRANK1O15050 2925 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 A0A0D9SG52 128 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 ZNF98A6NK75 572 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 FKTNO75072 461 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 PSMB10P40306 273 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 CLDN12P56749 244 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 DEFA5Q01523 94 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 FHL1Q13642 323 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 ZNF77Q15935 545 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 DCST2Q5T1A1 773 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 MTSS1LQ765P7 747 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 MUC20Q8N307 709 aaPredicted RBP16.14■□□□□ 0.17
RAB40C-205ENST00000539661 SLAIN1Q8ND83 568 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 ST8SIA2Q92186 375 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 ALX4Q9H161 411 aaPredicted RBP16.14■□□□□ 0.17
RAB40C-205ENST00000539661 SAV1Q9H4B6 383 aaPredicted RBP16.14■□□□□ 0.17
RAB40C-205ENST00000539661 FAM74A7A6NL05 159 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 XRCC3O43542 346 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 CBX7O95931 251 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms