RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 SLC2A5P22732 501 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 ACADLP28330 430 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 GRPRP30550 384 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 RFC3P40938 356 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 ZNF836Q6ZNA1 936 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 C12orf45Q8N5I9 185 aaPredicted RBP12.64□□□□□ -0.39
NPHP4-207ENST00000470763 SLC16A11Q8NCK7 471 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 OR51S1Q8NGJ8 323 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 OR8S1Q8NH09 359 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 OR4C6Q8NH72 309 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 OR14A16Q8NHC5 309 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 DOK4Q8TEW6 326 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 SFT2D1Q8WV19 159 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 GPR174Q9BXC1 333 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 KRCC1Q9NPI7 259 aaPredicted RBP12.64□□□□□ -0.39
NPHP4-207ENST00000470763 DNAH14Q0VDD8 3507 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 A0A0A6YYD5 115 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 A0A1W2PR48 441 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 SLC25A12O75746 678 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 CTSLP07711 333 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 ACRP10323 421 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 ITPKBP27987 946 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 PRKAR1BP31321 381 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 MECP2P51608 486 aaKnown RBP12.64□□□□□ -0.39
NPHP4-207ENST00000470763 MRM1Q6IN84 353 aaKnown RBP12.64□□□□□ -0.39
NPHP4-207ENST00000470763 SVBPQ8N300 66 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 DEFB123Q8N688 67 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 CAMKVQ8NCB2 501 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 SDR9C7Q8NEX9 313 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 OR1M1Q8NGA1 313 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 OR56A1Q8NGH5 318 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 TMEM239Q8WW34 195 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 CDS1Q92903 461 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 DVL3Q92997 716 aaPredicted RBP12.64□□□□□ -0.39
NPHP4-207ENST00000470763 ZNF559Q9BR84 538 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 VN1R3Q9BXE9 311 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 TSPAN10Q9H1Z9 355 aaPredicted RBP12.64□□□□□ -0.39
NPHP4-207ENST00000470763 SPG21Q9NZD8 308 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 SLC35A3Q9Y2D2 325 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 V9GY05 133 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 PQLC2LA1A4F0 135 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 RFPL4AA6NLU0 287 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 RFPL4AL1F8VTS6 287 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 ACAA1P09110 424 aaPredicted RBP12.63□□□□□ -0.39
NPHP4-207ENST00000470763 F3P13726 295 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 CBR1P16152 277 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 ZNF3P17036 446 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 HTR2AP28223 471 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 BDKRB2P30411 391 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 GUCA2AQ02747 115 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 CCDC157Q569K6 752 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 TMEM240Q5SV17 173 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 HTR3DQ70Z44 454 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 SLC35A4Q96G79 324 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 LRFN2Q9ULH4 789 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 TMEM218A2RU14 115 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 NEDD8-MDP1E9PL57 170 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 KPNA3O00505 521 aaPredicted RBP12.63□□□□□ -0.39
NPHP4-207ENST00000470763 NRG2O14511 850 aaPredicted RBP12.63□□□□□ -0.39
NPHP4-207ENST00000470763 CRYBA1P05813 215 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 ZNF136P52737 540 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 SMAD2Q15796 467 aaKnown RBP12.63□□□□□ -0.39
NPHP4-207ENST00000470763 TMEM64Q6YI46 380 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 MAMSTRQ6ZN01 415 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 FRRS1Q6ZNA5 592 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 EID2Q8N6I1 236 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 THAP6Q8TBB0 222 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 ADAMTS15Q8TE58 950 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 HAVCR1Q96D42 359 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 BPIFA2Q96DR5 249 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 TRMT2BQ96GJ1 504 aaKnown RBP12.63□□□□□ -0.39
NPHP4-207ENST00000470763 EXO5Q9H790 373 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 ZNF223Q9UK11 482 aaPredicted RBP12.63□□□□□ -0.39
NPHP4-207ENST00000470763 SNRNP200O75643 2136 aaKnown RBP12.63□□□□□ -0.39
NPHP4-207ENST00000470763 NPIPA5A0A0B4J1W7 369 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 KANTRA0A1W2PQU2 76 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 NPIPA7E9PJI5 369 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 GRM6O15303 877 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 RCBTB2O95199 551 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 PAK4O96013 591 aaPredicted RBP12.63□□□□□ -0.39
NPHP4-207ENST00000470763 ZNF806P0C7X5 589 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 NPIPA8P0DM63 369 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 MPIP34949 423 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 PPIAP62937 165 aaKnown RBP12.63□□□□□ -0.39
NPHP4-207ENST00000470763 ACTC1P68032 377 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 ACTA1P68133 377 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 FAM109BQ6ICB4 259 aaPredicted RBP12.63□□□□□ -0.39
NPHP4-207ENST00000470763 TMEM25Q86YD3 366 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 COL26A1Q96A83 441 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 C2orf42Q9NWW7 574 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 SIGLEC7Q9Y286 467 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 ZNF337Q9Y3M9 751 aa12.63□□□□□ -0.39
NPHP4-207ENST00000470763 EMC8O43402 210 aa12.62□□□□□ -0.39
NPHP4-207ENST00000470763 ERI3O43414 337 aaKnown RBP12.62□□□□□ -0.39
NPHP4-207ENST00000470763 RBBP9O75884 186 aa12.62□□□□□ -0.39
NPHP4-207ENST00000470763 FABP1P07148 127 aa12.62□□□□□ -0.39
NPHP4-207ENST00000470763 MAPK3P27361 379 aaPredicted RBP12.62□□□□□ -0.39
NPHP4-207ENST00000470763 GABRR2P28476 465 aa12.62□□□□□ -0.39
NPHP4-207ENST00000470763 CAPZA2P47755 286 aa12.62□□□□□ -0.39
NPHP4-207ENST00000470763 SOX2P48431 317 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms