RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 PDE7AQ13946 482 aa14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 MRM1Q6IN84 353 aaKnown RBP14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 OVCH2Q7RTZ1 564 aa14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 OR2W3Q7Z3T1 314 aa14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 GLB1L2Q8IW92 636 aa14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 ACOT4Q8N9L9 421 aa14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 SFT2D1Q8WV19 159 aa14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 DCUN1D4Q92564 292 aa14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 C10orf90Q96M02 699 aa14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 ISYNA1Q9NPH2 558 aa14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 PIPOXQ9P0Z9 390 aa14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 CCL26Q9Y258 94 aa14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 BRWD1Q9NSI6 2320 aa14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 FITM1A5D6W6 292 aa14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 PRKNO60260 465 aaPredicted RBP14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 NDUFS6O75380 124 aaKnown RBP14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 SLC25A12O75746 678 aa14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 ASGR2P07307 311 aa14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 DYRK1AQ13627 763 aa14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 PEA15Q15121 130 aa14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 CDNFQ49AH0 187 aa14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 PDZD11Q5EBL8 140 aa14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 MRPL2Q5T653 305 aaKnown RBP14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 TTLL10Q6ZVT0 673 aa14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 TRAM1L1Q8N609 369 aa14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 NUBPLQ8TB37 319 aa14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 CD300LFQ8TDQ1 290 aa14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 NR4A3Q92570 626 aa14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 CNRIP1Q96F85 164 aaPredicted RBP14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 CNTNAP3BQ96NU0 1288 aa14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 FAM86C1Q9NVL1 165 aa14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 MARCH5Q9NX47 278 aa14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 CALML5Q9NZT1 146 aa14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 HEATR5BQ9P2D3 2071 aa14.68□□□□□ -0.06
PRPF40B-201ENST00000261897 CXCL14O95715 111 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 UBBP0CG47 229 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 UBCP0CG48 685 aaKnown RBP14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 F3P13726 295 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 CNR1P21554 472 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 DDX6P26196 483 aaKnown RBP eCLIP14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 PBX2P40425 430 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 MBOAT2Q6ZWT7 520 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 PM20D2Q8IYS1 436 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 OR2A12Q8NGT7 310 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 OR14A16Q8NHC5 309 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 ISOC2Q96AB3 205 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 PELI1Q96FA3 418 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 SPSB2Q99619 263 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 CMKLR1Q99788 373 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 JAM3Q9BX67 310 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 DOCK6Q96HP0 2047 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 IFITM5A6NNB3 132 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 IFNA6P05013 189 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 ZDHHC11BP0C7U3 371 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 PRSS3P35030 304 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 GAS1P54826 345 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 OR1Q1Q15612 314 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 CDKN3Q16667 212 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 ZNF836Q6ZNA1 936 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 RNF165Q6ZSG1 346 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 PARGQ86W56 976 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 OR56A1Q8NGH5 318 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 MS4A8Q9BY19 250 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 SLC38A1Q9H2H9 487 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 IL20Q9NYY1 176 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 OR5H14A6NHG9 310 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 WASH3PC4AMC7 463 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 EMC8O43402 210 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 AIFM1O95831 613 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 TGM6O95932 706 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 DAOP14920 347 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 DUSP2Q05923 314 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 SNTB1Q13884 538 aaKnown RBP14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 USF2Q15853 346 aaPredicted RBP14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 NAA40Q86UY6 237 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 NUS1Q96E22 293 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 SMIM3Q9BZL3 60 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 ESRP2Q9H6T0 727 aaKnown RBP14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 ZNF629Q9UEG4 869 aaPredicted RBP14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 FAM186AA6NE01 2351 aa14.67□□□□□ -0.06
PRPF40B-201ENST00000261897 SLC5A10A0PJK1 596 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 TRAPPC13A5PLN9 417 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 CTNSO60931 367 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 LDB3O75112 727 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 TIMP2P16035 220 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 BSGP35613 385 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 EXOSC7Q15024 291 aaKnown RBP14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 RASD2Q96D21 266 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 HHIPQ96QV1 700 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 SLC35A3Q9Y2D2 325 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 OR51B4Q9Y5P0 310 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 TMEM82A0PJX8 343 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 LATS1O95835 1130 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 NUDT14O95848 222 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 CYB5AP00167 134 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 FGF2P09038 288 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 NQO2P16083 231 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 EPCAMP16422 314 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 NME2P22392 152 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 AVPR2P30518 371 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms