RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 ST7LQ8TDW4 575 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 STYXQ8WUJ0 223 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 RAPGEF5Q92565 580 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 ZNF75CPQ92670 426 aaPredicted RBP4.06□□□□□ -1.76
SDCBP-205ENST00000447267 ADIPOR1Q96A54 375 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 C16orf58Q96GQ5 468 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 RBM18Q96H35 190 aaKnown RBP4.06□□□□□ -1.76
SDCBP-205ENST00000447267 C18orf15Q96N68 181 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 NPAS1Q99742 590 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 GAL3ST1Q99999 423 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 ZNF416Q9BWM5 594 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 TSSK1BQ9BXA7 367 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 NXF5Q9H1B4 397 aaKnown RBP4.06□□□□□ -1.76
SDCBP-205ENST00000447267 GBA3Q9H227 469 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 TMEM185BQ9H7F4 350 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 TCF7L2Q9NQB0 619 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 LMBRD1Q9NUN5 540 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 INTS10Q9NVR2 710 aaKnown RBP4.06□□□□□ -1.76
SDCBP-205ENST00000447267 KLHL13Q9P2N7 655 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 MRPS33Q9Y291 106 aaKnown RBP4.06□□□□□ -1.76
SDCBP-205ENST00000447267 CACNG2Q9Y698 323 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 AP4B1Q9Y6B7 739 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 USH1CQ9Y6N9 552 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 IGHV3-15A0A0B4J1V0 119 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 TRBC2A0A5B9 178 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 POC1B-GALNT4F8VUJ3 575 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 F8W8V4 182 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 NDUFAB1O14561 156 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 SKAP2O75563 359 aaPredicted RBP4.05□□□□□ -1.76
SDCBP-205ENST00000447267 FOXH1O75593 365 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 DUS4LO95620 317 aaKnown RBP4.05□□□□□ -1.76
SDCBP-205ENST00000447267 GOT2P00505 430 aaKnown RBP4.05□□□□□ -1.76
SDCBP-205ENST00000447267 PF4V1P10720 104 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 COX7A2P14406 83 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 H2AFXP16104 143 aaPredicted RBP4.05□□□□□ -1.76
SDCBP-205ENST00000447267 NDUFB7P17568 137 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 CERS1P27544 350 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 SKIV2L2P42285 1042 aaKnown RBP4.05□□□□□ -1.76
SDCBP-205ENST00000447267 MAGEB1P43366 347 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 PLA2G16P53816 162 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 GEMP55040 296 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 RAB10P61026 200 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 TUBA4AP68366 448 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 IGLV3-21P80748 117 aaPredicted RBP4.05□□□□□ -1.76
SDCBP-205ENST00000447267 CBX3Q13185 183 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 SNTA1Q13424 505 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 SPARCL1Q14515 664 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 ACSBG2Q5FVE4 666 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 PLAC9Q5JTB6 97 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 OTUD3Q5T2D3 398 aaPredicted RBP4.05□□□□□ -1.76
SDCBP-205ENST00000447267 HBMQ6B0K9 141 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 CLEC6AQ6EIG7 209 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 UNQ9370/PRO34162Q6UXP9 181 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 PID1Q7Z2X4 250 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 C17orf64Q86WR6 236 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 SLC15A3Q8IY34 581 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 ZNF100Q8IYN0 542 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 CCDC170Q8IYT3 715 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 MIER2Q8N344 545 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 GALNT4Q8N4A0 578 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 RNF10Q8N5U6 811 aaKnown RBP4.05□□□□□ -1.76
SDCBP-205ENST00000447267 ABHD11Q8NFV4 315 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 OR2M3Q8NG83 312 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 OR2V1Q8NHB1 315 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 UPRTQ96BW1 309 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 PPP1R14BQ96C90 147 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 OMA1Q96E52 524 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 MUS81Q96NY9 551 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 MAPKAP1Q9BPZ7 522 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 NPLQ9BXD5 320 aaPredicted RBP4.05□□□□□ -1.76
SDCBP-205ENST00000447267 SRXN1Q9BYN0 137 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 P2RY12Q9H244 342 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 PPA2Q9H2U2 334 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 RABEP2Q9H5N1 569 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 CXorf36Q9H7Y0 433 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 CCDC177Q9NQR7 707 aaPredicted RBP4.05□□□□□ -1.76
SDCBP-205ENST00000447267 DUSP22Q9NRW4 184 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 FAM114A2Q9NRY5 505 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.05□□□□□ -1.76
SDCBP-205ENST00000447267 GALPQ9UBC7 116 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 RWDD2AQ9UIY3 292 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 HOOK1Q9UJC3 728 aaKnown RBP4.05□□□□□ -1.76
SDCBP-205ENST00000447267 PAIP2BQ9ULR5 123 aaKnown RBP4.05□□□□□ -1.76
SDCBP-205ENST00000447267 GMEB1Q9Y692 573 aa4.05□□□□□ -1.76
SDCBP-205ENST00000447267 BZW2Q9Y6E2 419 aaKnown RBP4.05□□□□□ -1.76
SDCBP-205ENST00000447267 MYCBP2O75592 4640 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 PCNX3Q9H6A9 2034 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 A0A1W2PRQ8 180 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 ISPDA4D126 451 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 URADA6NGE7 173 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 ANKRD61A6NGH8 418 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 ZNF487B1APH4 448 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 PPP6CO00743 305 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 PRMT5O14744 637 aaPredicted RBP4.04□□□□□ -1.76
SDCBP-205ENST00000447267 APOL1O14791 398 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 SLC16A6O15403 523 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 ERI3O43414 337 aaKnown RBP4.04□□□□□ -1.76
SDCBP-205ENST00000447267 NIPSNAP2O75323 286 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 ZNF254O75437 659 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 NXPH3O95157 252 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms