RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 FEVQ99581 238 aa11.63□□□□□ -0.55
DDX39A-202ENST00000324340 PRSS27Q9BQR3 290 aa11.63□□□□□ -0.55
DDX39A-202ENST00000324340 SLC30A2Q9BRI3 323 aa11.63□□□□□ -0.55
DDX39A-202ENST00000324340 SLC22A4Q9H015 551 aa11.63□□□□□ -0.55
DDX39A-202ENST00000324340 CDCP1Q9H5V8 836 aa11.63□□□□□ -0.55
DDX39A-202ENST00000324340 TMEM27Q9HBJ8 222 aa11.63□□□□□ -0.55
DDX39A-202ENST00000324340 SH2D2AQ9NP31 389 aa11.63□□□□□ -0.55
DDX39A-202ENST00000324340 CTPS2Q9NRF8 586 aa11.63□□□□□ -0.55
DDX39A-202ENST00000324340 KLK13Q9UKR3 277 aa11.63□□□□□ -0.55
DDX39A-202ENST00000324340 NDRG4Q9ULP0 352 aaKnown RBP11.63□□□□□ -0.55
DDX39A-202ENST00000324340 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.63□□□□□ -0.55
DDX39A-202ENST00000324340 ICAM5Q9UMF0 924 aa11.63□□□□□ -0.55
DDX39A-202ENST00000324340 AUP1Q9Y679 476 aa11.63□□□□□ -0.55
DDX39A-202ENST00000324340 A0A087WUU8 490 aa11.62□□□□□ -0.55
DDX39A-202ENST00000324340 LINC00862A6NCI5 91 aa11.62□□□□□ -0.55
DDX39A-202ENST00000324340 GTPBP1O00178 669 aaKnown RBP11.62□□□□□ -0.55
DDX39A-202ENST00000324340 FAM20BO75063 409 aa11.62□□□□□ -0.55
DDX39A-202ENST00000324340 ZNF780AO75290 641 aaPredicted RBP11.62□□□□□ -0.55
DDX39A-202ENST00000324340 IGFBP5P24593 272 aa11.62□□□□□ -0.55
DDX39A-202ENST00000324340 PTGDSP41222 190 aa11.62□□□□□ -0.55
DDX39A-202ENST00000324340 SLC6A8P48029 635 aa11.62□□□□□ -0.55
DDX39A-202ENST00000324340 ZNF117Q03924 483 aa11.62□□□□□ -0.55
DDX39A-202ENST00000324340 CLN3Q13286 438 aa11.62□□□□□ -0.55
DDX39A-202ENST00000324340 SNTA1Q13424 505 aa11.62□□□□□ -0.55
DDX39A-202ENST00000324340 ASAH1Q13510 395 aa11.62□□□□□ -0.55
DDX39A-202ENST00000324340 MAD2L1BPQ15013 274 aaPredicted RBP11.62□□□□□ -0.55
DDX39A-202ENST00000324340 ARMCX4Q5H9R4 360 aa11.62□□□□□ -0.55
DDX39A-202ENST00000324340 ZNF782Q6ZMW2 699 aaPredicted RBP11.62□□□□□ -0.55
DDX39A-202ENST00000324340 GDPGP1Q6ZNW5 385 aa11.62□□□□□ -0.55
DDX39A-202ENST00000324340 RDH10Q8IZV5 341 aa11.62□□□□□ -0.55
DDX39A-202ENST00000324340 CELF2-AS1Q8N7Q2 184 aa11.62□□□□□ -0.55
DDX39A-202ENST00000324340 ATG16L2Q8NAA4 619 aa11.62□□□□□ -0.55
DDX39A-202ENST00000324340 GATSQ8NAP1 163 aa11.62□□□□□ -0.55
DDX39A-202ENST00000324340 OR10G3Q8NGC4 313 aa11.62□□□□□ -0.55
DDX39A-202ENST00000324340 ACOT11Q8WXI4 607 aaPredicted RBP11.62□□□□□ -0.55
DDX39A-202ENST00000324340 ASB15Q8WXK1 588 aa11.62□□□□□ -0.55
DDX39A-202ENST00000324340 THAP4Q8WY91 577 aa11.62□□□□□ -0.55
DDX39A-202ENST00000324340 CCNL2Q96S94 520 aaPredicted RBP11.62□□□□□ -0.55
DDX39A-202ENST00000324340 ZNF426Q9BUY5 554 aa11.62□□□□□ -0.55
DDX39A-202ENST00000324340 LIN7BQ9HAP6 207 aa11.62□□□□□ -0.55
DDX39A-202ENST00000324340 HHATLQ9HCP6 504 aa11.62□□□□□ -0.55
DDX39A-202ENST00000324340 SLC7A7Q9UM01 511 aa11.62□□□□□ -0.55
DDX39A-202ENST00000324340 MGAT4BQ9UQ53 548 aa11.62□□□□□ -0.55
DDX39A-202ENST00000324340 CHCHD2Q9Y6H1 151 aaPredicted RBP11.62□□□□□ -0.55
DDX39A-202ENST00000324340 CFAP54Q96N23 3096 aa11.62□□□□□ -0.55
DDX39A-202ENST00000324340 IGLV3-32A0A0A0MS00 114 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 A0A1B0GWA3 101 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 MEIOCA2RUB1 952 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 TP53I11O14683 189 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 CHP2O43745 196 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 TSPAN9O75954 239 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 ADAP00813 363 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 GASTP01350 101 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 C1QBP02746 253 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 HTR2BP41595 481 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 MAP2K4P45985 399 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 GZMKP49863 264 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 SUMO3P55854 103 aaPredicted RBP11.61□□□□□ -0.55
DDX39A-202ENST00000324340 SOX8P57073 446 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 PIGFQ07326 219 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 C17orf67Q0P5P2 114 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 FAPQ12884 760 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 RAPSNQ13702 412 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 ACER2Q5QJU3 275 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 FCRLBQ6BAA4 426 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 WBP2NLQ6ICG8 309 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 C1orf94Q6P1W5 598 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 PGBD2Q6P3X8 592 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 ULK3Q6PHR2 472 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 C19orf48Q6RUI8 117 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 LINC00114Q6XXX2 140 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 NKAIN4Q8IVV8 208 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 GPALPP1Q8IXQ4 340 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 RNF113BQ8IZP6 322 aaKnown RBP11.61□□□□□ -0.55
DDX39A-202ENST00000324340 AQP11Q8NBQ7 271 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 ZNF540Q8NDQ6 660 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 OR4K5Q8NGD3 323 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 OR9Q2Q8NGE9 314 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 OR5M3Q8NGP4 307 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 OR5H6Q8NGV6 325 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 BRIX1Q8TDN6 353 aaKnown RBP11.61□□□□□ -0.55
DDX39A-202ENST00000324340 DNAJA4Q8WW22 397 aaPredicted RBP11.61□□□□□ -0.55
DDX39A-202ENST00000324340 ARSGQ96EG1 525 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 THOC3Q96J01 351 aaKnown RBP11.61□□□□□ -0.55
DDX39A-202ENST00000324340 FRMD6Q96NE9 622 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 NIPSNAP1Q9BPW8 284 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 GABARAPL3Q9BY60 117 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 C6orf62Q9GZU0 229 aaPredicted RBP11.61□□□□□ -0.55
DDX39A-202ENST00000324340 KRT84Q9NSB2 600 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 PTTG3PQ9NZH4 202 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 KIF17Q9P2E2 1029 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 EIF3KQ9UBQ5 218 aaKnown RBP11.61□□□□□ -0.55
DDX39A-202ENST00000324340 POFUT2Q9Y2G5 429 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 DMXL1Q9Y485 3027 aa11.61□□□□□ -0.55
DDX39A-202ENST00000324340 CTDSP2O14595 271 aa11.6□□□□□ -0.55
DDX39A-202ENST00000324340 HCRTR2O43614 444 aa11.6□□□□□ -0.55
DDX39A-202ENST00000324340 XPNPEP2O43895 674 aa11.6□□□□□ -0.55
DDX39A-202ENST00000324340 OR10H3O60404 316 aa11.6□□□□□ -0.55
DDX39A-202ENST00000324340 MITFO75030 526 aaPredicted RBP11.6□□□□□ -0.55
DDX39A-202ENST00000324340 GTF2E2P29084 291 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms