RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 GREM2Q9H772 168 aa21.61■■□□□ 1.05
PHGDH-232ENST00000641947 SH3TC1Q8TE82 1336 aa21.61■■□□□ 1.05
PHGDH-232ENST00000641947 SLC27A3Q5K4L6 730 aa21.61■■□□□ 1.05
PHGDH-232ENST00000641947 TBC1D9BQ66K14 1250 aa21.61■■□□□ 1.05
PHGDH-232ENST00000641947 PUS3Q9BZE2 481 aaKnown RBP21.61■■□□□ 1.05
PHGDH-232ENST00000641947 TAF1P21675 1872 aa21.6■■□□□ 1.05
PHGDH-232ENST00000641947 PDE8AO60658 829 aa21.6■■□□□ 1.05
PHGDH-232ENST00000641947 CDC45O75419 566 aa21.6■■□□□ 1.05
PHGDH-232ENST00000641947 PHF14O94880 888 aa21.6■■□□□ 1.05
PHGDH-232ENST00000641947 HCLS1P14317 486 aaPredicted RBP21.6■■□□□ 1.05
PHGDH-232ENST00000641947 AK7Q96M32 723 aa21.6■■□□□ 1.05
PHGDH-232ENST00000641947 CCDC8Q9H0W5 538 aaPredicted RBP21.6■■□□□ 1.05
PHGDH-232ENST00000641947 RGPD3A6NKT7 1758 aaPredicted RBP21.6■■□□□ 1.05
PHGDH-232ENST00000641947 RGPD4Q7Z3J3 1758 aa21.6■■□□□ 1.05
PHGDH-232ENST00000641947 RGL2O15211 777 aa21.59■■□□□ 1.05
PHGDH-232ENST00000641947 EYA2O00167 538 aa21.59■■□□□ 1.05
PHGDH-232ENST00000641947 MFAP1P55081 439 aaKnown RBP21.59■■□□□ 1.05
PHGDH-232ENST00000641947 TXNRD1Q16881 649 aa21.59■■□□□ 1.05
PHGDH-232ENST00000641947 CCDC57Q2TAC2 916 aa21.59■■□□□ 1.05
PHGDH-232ENST00000641947 TNNI3KQ59H18 835 aa21.58■■□□□ 1.04
PHGDH-232ENST00000641947 BICDL1Q6ZP65 573 aa21.58■■□□□ 1.04
PHGDH-232ENST00000641947 FPGT-TNNI3KV9GXZ4 949 aa21.58■■□□□ 1.04
PHGDH-232ENST00000641947 TTC41PQ6P2S7 1318 aa21.57■■□□□ 1.04
PHGDH-232ENST00000641947 IFIT2P09913 472 aaKnown RBP21.57■■□□□ 1.04
PHGDH-232ENST00000641947 ITGA6P23229 1130 aa21.57■■□□□ 1.04
PHGDH-232ENST00000641947 RIC1Q4ADV7 1423 aa21.57■■□□□ 1.04
PHGDH-232ENST00000641947 ZPR1O75312 459 aa21.56■■□□□ 1.04
PHGDH-232ENST00000641947 CIAO1O76071 339 aa21.56■■□□□ 1.04
PHGDH-232ENST00000641947 A0A1B0GUL6 1792 aa21.56■■□□□ 1.04
PHGDH-232ENST00000641947 MAP4K4O95819 1239 aaPredicted RBP21.56■■□□□ 1.04
PHGDH-232ENST00000641947 IFIT5Q13325 482 aaKnown RBP21.56■■□□□ 1.04
PHGDH-232ENST00000641947 TRAPPC3LQ5T215 181 aa21.56■■□□□ 1.04
PHGDH-232ENST00000641947 ECHDC1Q9NTX5 307 aa21.56■■□□□ 1.04
PHGDH-232ENST00000641947 DBNLQ9UJU6 430 aaKnown RBP21.56■■□□□ 1.04
PHGDH-232ENST00000641947 ZNF609O15014 1411 aa21.56■■□□□ 1.04
PHGDH-232ENST00000641947 ABCC12Q96J65 1359 aa21.55■■□□□ 1.04
PHGDH-232ENST00000641947 TNRC6CQ9HCJ0 1690 aaKnown RBP21.55■■□□□ 1.04
PHGDH-232ENST00000641947 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.55■■□□□ 1.04
PHGDH-232ENST00000641947 APBA3O96018 575 aa21.55■■□□□ 1.04
PHGDH-232ENST00000641947 ANP32AP39687 249 aaKnown RBP21.55■■□□□ 1.04
PHGDH-232ENST00000641947 IL15P40933 162 aaPredicted RBP21.55■■□□□ 1.04
PHGDH-232ENST00000641947 ERFEQ4G0M1 354 aa21.55■■□□□ 1.04
PHGDH-232ENST00000641947 TBC1D32Q96NH3 1257 aa21.55■■□□□ 1.04
PHGDH-232ENST00000641947 PLSCR1O15162 318 aa21.54■■□□□ 1.04
PHGDH-232ENST00000641947 RFC4P35249 363 aa21.53■■□□□ 1.04
PHGDH-232ENST00000641947 C3orf67Q6ZVT6 689 aa21.53■■□□□ 1.04
PHGDH-232ENST00000641947 TRIM6-TRIM34B2RNG4 842 aa21.53■■□□□ 1.04
PHGDH-232ENST00000641947 RILPL2Q969X0 211 aa21.53■■□□□ 1.04
PHGDH-232ENST00000641947 ANKRD18BA2A2Z9 1011 aa21.52■■□□□ 1.04
PHGDH-232ENST00000641947 GLRX3O76003 335 aaKnown RBP21.52■■□□□ 1.04
PHGDH-232ENST00000641947 ADRA2BP18089 450 aa21.52■■□□□ 1.04
PHGDH-232ENST00000641947 ZNF827Q17R98 1081 aa21.52■■□□□ 1.04
PHGDH-232ENST00000641947 DBNDD2Q9BQY9 259 aa21.52■■□□□ 1.04
PHGDH-232ENST00000641947 TAF7LQ5H9L4 462 aa21.51■■□□□ 1.03
PHGDH-232ENST00000641947 SEC31BQ9NQW1 1179 aa21.51■■□□□ 1.03
PHGDH-232ENST00000641947 FBXO3Q9UK99 471 aa21.51■■□□□ 1.03
PHGDH-232ENST00000641947 RIPOR2Q9Y4F9 1068 aa21.51■■□□□ 1.03
PHGDH-232ENST00000641947 ARAP2Q8WZ64 1704 aa21.51■■□□□ 1.03
PHGDH-232ENST00000641947 SETDB2Q96T68 719 aa21.51■■□□□ 1.03
PHGDH-232ENST00000641947 GPR108Q9NPR9 543 aa21.51■■□□□ 1.03
PHGDH-232ENST00000641947 RTL9Q8NET4 1388 aa21.5■■□□□ 1.03
PHGDH-232ENST00000641947 SSFA2P28290 1259 aa21.5■■□□□ 1.03
PHGDH-232ENST00000641947 GPATCH3Q96I76 525 aa21.5■■□□□ 1.03
PHGDH-232ENST00000641947 ERC2O15083 957 aa21.49■■□□□ 1.03
PHGDH-232ENST00000641947 TIMM10P62072 90 aa21.49■■□□□ 1.03
PHGDH-232ENST00000641947 C22orf23Q9BZE7 217 aa21.49■■□□□ 1.03
PHGDH-232ENST00000641947 UPF2Q9HAU5 1272 aaKnown RBP21.49■■□□□ 1.03
PHGDH-232ENST00000641947 GYS1P13807 737 aa21.48■■□□□ 1.03
PHGDH-232ENST00000641947 CHMLP26374 656 aa21.48■■□□□ 1.03
PHGDH-232ENST00000641947 LDHAL6AQ6ZMR3 332 aa21.48■■□□□ 1.03
PHGDH-232ENST00000641947 MSH5O43196 834 aa21.48■■□□□ 1.03
PHGDH-232ENST00000641947 NFIXQ14938 502 aa21.48■■□□□ 1.03
PHGDH-232ENST00000641947 CCDC24Q8N4L8 307 aa21.48■■□□□ 1.03
PHGDH-232ENST00000641947 AKT1S1Q96B36 256 aa21.48■■□□□ 1.03
PHGDH-232ENST00000641947 A0A1B0GUL7 405 aa21.47■■□□□ 1.03
PHGDH-232ENST00000641947 SLC10A5Q5PT55 438 aa21.47■■□□□ 1.03
PHGDH-232ENST00000641947 NBPF5PQ86XG9 351 aaPredicted RBP21.47■■□□□ 1.03
PHGDH-232ENST00000641947 VGLL2Q8N8G2 317 aa21.47■■□□□ 1.03
PHGDH-232ENST00000641947 IL25Q9H293 177 aa21.47■■□□□ 1.03
PHGDH-232ENST00000641947 BOLA2Q9H3K6 86 aa21.47■■□□□ 1.03
PHGDH-232ENST00000641947 CCDC152Q4G0S7 254 aa21.46■■□□□ 1.03
PHGDH-232ENST00000641947 IPO9Q96P70 1041 aaKnown RBP21.46■■□□□ 1.03
PHGDH-232ENST00000641947 CEP126Q9P2H0 1117 aa21.46■■□□□ 1.03
PHGDH-232ENST00000641947 CNTROBQ8N137 903 aa21.46■■□□□ 1.03
PHGDH-232ENST00000641947 NEUROD6Q96NK8 337 aa21.46■■□□□ 1.03
PHGDH-232ENST00000641947 NYXQ9GZU5 481 aa21.46■■□□□ 1.03
PHGDH-232ENST00000641947 CNNM1Q9NRU3 951 aa21.46■■□□□ 1.03
PHGDH-232ENST00000641947 CARMIL3Q8ND23 1372 aa21.45■■□□□ 1.03
PHGDH-232ENST00000641947 AKAP11Q9UKA4 1901 aa21.45■■□□□ 1.02
PHGDH-232ENST00000641947 ATP5JP18859 108 aa21.45■■□□□ 1.02
PHGDH-232ENST00000641947 ADORA1P30542 326 aa21.45■■□□□ 1.02
PHGDH-232ENST00000641947 SF3B3Q15393 1217 aaKnown RBP21.45■■□□□ 1.02
PHGDH-232ENST00000641947 ESYT1Q9BSJ8 1104 aa21.45■■□□□ 1.02
PHGDH-232ENST00000641947 NDUFB9Q9Y6M9 179 aa21.45■■□□□ 1.02
PHGDH-232ENST00000641947 HSP90B1P14625 803 aaKnown RBP21.44■■□□□ 1.02
PHGDH-232ENST00000641947 RBM25P49756 843 aaKnown RBP21.44■■□□□ 1.02
PHGDH-232ENST00000641947 METTL24Q5JXM2 366 aa21.44■■□□□ 1.02
PHGDH-232ENST00000641947 CASC1Q6TDU7 716 aa21.43■■□□□ 1.02
PHGDH-232ENST00000641947 EDC3Q96F86 508 aaKnown RBP21.43■■□□□ 1.02
PHGDH-232ENST00000641947 GTF2E1P29083 439 aaPredicted RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms