RNA–Protein interactions for RNA: ENST00000595240.5

IRF3-210, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-210ENST00000595240 PCCAP05165 728 aaPredicted RBP20.57■□□□□ 0.88
IRF3-210ENST00000595240 EXOSC9Q06265 439 aaKnown RBP20.57■□□□□ 0.88
IRF3-210ENST00000595240 JDP2Q8WYK2 163 aa20.57■□□□□ 0.88
IRF3-210ENST00000595240 RTFDC1Q9BY42 306 aaPredicted RBP20.57■□□□□ 0.88
IRF3-210ENST00000595240 MYH16Q9H6N6 1097 aa20.57■□□□□ 0.88
IRF3-210ENST00000595240 COL4A5P29400 1685 aa20.57■□□□□ 0.88
IRF3-210ENST00000595240 ZNF521Q96K83 1311 aa20.56■□□□□ 0.88
IRF3-210ENST00000595240 IGKV5-2P06315 115 aa20.56■□□□□ 0.88
IRF3-210ENST00000595240 HSP90B1P14625 803 aaKnown RBP20.56■□□□□ 0.88
IRF3-210ENST00000595240 APLP1P51693 650 aa20.56■□□□□ 0.88
IRF3-210ENST00000595240 TMC4Q7Z404 712 aa20.56■□□□□ 0.88
IRF3-210ENST00000595240 FLIIQ13045 1269 aa20.55■□□□□ 0.88
IRF3-210ENST00000595240 LARGE2Q8N3Y3 721 aa20.55■□□□□ 0.88
IRF3-210ENST00000595240 VPS33BQ9H267 617 aa20.55■□□□□ 0.88
IRF3-210ENST00000595240 IQCA1LA6NCM1 817 aa20.54■□□□□ 0.88
IRF3-210ENST00000595240 DPP8Q6V1X1 898 aaPredicted RBP20.54■□□□□ 0.88
IRF3-210ENST00000595240 MPNDQ8N594 471 aa20.54■□□□□ 0.88
IRF3-210ENST00000595240 SUPT20HQ8NEM7 779 aa20.54■□□□□ 0.88
IRF3-210ENST00000595240 CELF1Q92879 486 aaKnown RBP20.54■□□□□ 0.88
IRF3-210ENST00000595240 PPIP5K2O43314 1243 aa20.53■□□□□ 0.88
IRF3-210ENST00000595240 NEXNQ0ZGT2 675 aa20.53■□□□□ 0.88
IRF3-210ENST00000595240 GPC2Q8N158 579 aa20.53■□□□□ 0.88
IRF3-210ENST00000595240 PDE8AO60658 829 aa20.52■□□□□ 0.88
IRF3-210ENST00000595240 AOC3Q16853 763 aa20.52■□□□□ 0.88
IRF3-210ENST00000595240 JARID2Q92833 1246 aaPredicted RBP20.52■□□□□ 0.88
IRF3-210ENST00000595240 TAF1DQ9H5J8 278 aaPredicted RBP20.52■□□□□ 0.88
IRF3-210ENST00000595240 CDHR2Q9BYE9 1310 aa20.52■□□□□ 0.87
IRF3-210ENST00000595240 NEURL1BA8MQ27 555 aa20.51■□□□□ 0.87
IRF3-210ENST00000595240 EIF6P56537 245 aaKnown RBP20.51■□□□□ 0.87
IRF3-210ENST00000595240 CWF19L2Q2TBE0 894 aaKnown RBP20.51■□□□□ 0.87
IRF3-210ENST00000595240 NIM1KQ8IY84 436 aa20.51■□□□□ 0.87
IRF3-210ENST00000595240 COL4A1P02462 1669 aa20.51■□□□□ 0.87
IRF3-210ENST00000595240 RPS8P62241 208 aaKnown RBP20.5■□□□□ 0.87
IRF3-210ENST00000595240 FKBP5Q13451 457 aaPredicted RBP20.5■□□□□ 0.87
IRF3-210ENST00000595240 CCDC152Q4G0S7 254 aa20.5■□□□□ 0.87
IRF3-210ENST00000595240 LRRC37AA6NMS7 1700 aa20.5■□□□□ 0.87
IRF3-210ENST00000595240 CCER2I3L3R5 266 aa20.49■□□□□ 0.87
IRF3-210ENST00000595240 POTEIP0CG38 1075 aa20.49■□□□□ 0.87
IRF3-210ENST00000595240 POTEJP0CG39 1038 aa20.49■□□□□ 0.87
IRF3-210ENST00000595240 KIAA2012Q0VF49 1180 aa20.49■□□□□ 0.87
IRF3-210ENST00000595240 SEC31BQ9NQW1 1179 aa20.49■□□□□ 0.87
IRF3-210ENST00000595240 HACL1Q9UJ83 578 aa20.49■□□□□ 0.87
IRF3-210ENST00000595240 DUOX1Q9NRD9 1551 aa20.49■□□□□ 0.87
IRF3-210ENST00000595240 TAF1P21675 1872 aa20.49■□□□□ 0.87
IRF3-210ENST00000595240 CHADLQ6NUI6 762 aa20.48■□□□□ 0.87
IRF3-210ENST00000595240 DNAAF4Q8WXU2 420 aa20.48■□□□□ 0.87
IRF3-210ENST00000595240 ZNRF3Q9ULT6 936 aa20.48■□□□□ 0.87
IRF3-210ENST00000595240 H7C1W4 665 aa20.47■□□□□ 0.87
IRF3-210ENST00000595240 EPHX2P34913 555 aa20.47■□□□□ 0.87
IRF3-210ENST00000595240 CTSWP56202 376 aa20.47■□□□□ 0.87
IRF3-210ENST00000595240 GCKRQ14397 625 aa20.47■□□□□ 0.87
IRF3-210ENST00000595240 DNAJC5GQ8N7S2 189 aa20.47■□□□□ 0.87
IRF3-210ENST00000595240 LINS1Q8NG48 757 aa20.47■□□□□ 0.87
IRF3-210ENST00000595240 NSFL1CQ9UNZ2 370 aaKnown RBP20.47■□□□□ 0.87
IRF3-210ENST00000595240 GJA3Q9Y6H8 435 aa20.47■□□□□ 0.87
IRF3-210ENST00000595240 SCN4AP35499 1836 aa20.47■□□□□ 0.87
IRF3-210ENST00000595240 GPSM2P81274 684 aa20.46■□□□□ 0.87
IRF3-210ENST00000595240 LDHDQ86WU2 507 aa20.46■□□□□ 0.87
IRF3-210ENST00000595240 SCNN1DP51172 638 aa20.45■□□□□ 0.86
IRF3-210ENST00000595240 HTRA3P83110 453 aa20.45■□□□□ 0.86
IRF3-210ENST00000595240 UBE3BQ7Z3V4 1068 aa20.45■□□□□ 0.86
IRF3-210ENST00000595240 TTLL11Q8NHH1 800 aa20.45■□□□□ 0.86
IRF3-210ENST00000595240 CCDC85AQ96PX6 553 aaPredicted RBP20.45■□□□□ 0.86
IRF3-210ENST00000595240 POLLQ9UGP5 575 aa20.45■□□□□ 0.86
IRF3-210ENST00000595240 E9PSI1 815 aa20.44■□□□□ 0.86
IRF3-210ENST00000595240 CASP7P55210 303 aa20.44■□□□□ 0.86
IRF3-210ENST00000595240 CXCL9Q07325 125 aa20.44■□□□□ 0.86
IRF3-210ENST00000595240 PNMA8AQ86V59 439 aaPredicted RBP20.44■□□□□ 0.86
IRF3-210ENST00000595240 RTL9Q8NET4 1388 aa20.44■□□□□ 0.86
IRF3-210ENST00000595240 CACNA1FO60840 1977 aa20.43■□□□□ 0.86
IRF3-210ENST00000595240 F6X3S4 739 aa20.43■□□□□ 0.86
IRF3-210ENST00000595240 WASHC4Q2M389 1173 aa20.43■□□□□ 0.86
IRF3-210ENST00000595240 EAPPQ56P03 285 aaPredicted RBP20.43■□□□□ 0.86
IRF3-210ENST00000595240 PLA2G12BQ9BX93 195 aa20.43■□□□□ 0.86
IRF3-210ENST00000595240 PODXL2Q9NZ53 605 aa20.43■□□□□ 0.86
IRF3-210ENST00000595240 LTBP1Q14766 1721 aa20.42■□□□□ 0.86
IRF3-210ENST00000595240 C6orf229H3BNL8 230 aa20.42■□□□□ 0.86
IRF3-210ENST00000595240 LMOD1P29536 600 aaPredicted RBP20.42■□□□□ 0.86
IRF3-210ENST00000595240 ANKRD18AQ8IVF6 992 aa20.42■□□□□ 0.86
IRF3-210ENST00000595240 TBC1D16Q8TBP0 767 aa20.42■□□□□ 0.86
IRF3-210ENST00000595240 GREM2Q9H772 168 aa20.42■□□□□ 0.86
IRF3-210ENST00000595240 YDJCA8MPS7 323 aa20.41■□□□□ 0.86
IRF3-210ENST00000595240 EPS15P42566 896 aa20.41■□□□□ 0.86
IRF3-210ENST00000595240 SLFN5Q08AF3 891 aa20.41■□□□□ 0.86
IRF3-210ENST00000595240 BEND3Q5T5X7 828 aa20.41■□□□□ 0.86
IRF3-210ENST00000595240 CDC5LQ99459 802 aaKnown RBP20.41■□□□□ 0.86
IRF3-210ENST00000595240 CIAPIN1Q6FI81 312 aa20.4■□□□□ 0.86
IRF3-210ENST00000595240 ADAMTSL1Q8N6G6 1762 aa20.4■□□□□ 0.86
IRF3-210ENST00000595240 EYA3Q99504 573 aa20.4■□□□□ 0.86
IRF3-210ENST00000595240 GPRC5DQ9NZD1 345 aa20.4■□□□□ 0.86
IRF3-210ENST00000595240 RAD17O75943 681 aa20.39■□□□□ 0.85
IRF3-210ENST00000595240 TNIP1Q15025 636 aa20.39■□□□□ 0.85
IRF3-210ENST00000595240 ANKIB1Q9P2G1 1089 aa20.39■□□□□ 0.85
IRF3-210ENST00000595240 PASKQ96RG2 1323 aa20.38■□□□□ 0.85
IRF3-210ENST00000595240 RIMBP2O15034 1052 aa20.38■□□□□ 0.85
IRF3-210ENST00000595240 UFL1O94874 794 aa20.38■□□□□ 0.85
IRF3-210ENST00000595240 ITGBL1O95965 494 aaPredicted RBP20.38■□□□□ 0.85
IRF3-210ENST00000595240 CSF1RP07333 972 aa20.38■□□□□ 0.85
IRF3-210ENST00000595240 GMPSP49915 693 aaPredicted RBP20.38■□□□□ 0.85
IRF3-210ENST00000595240 KLRG1Q96E93 195 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms