RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 KSR2Q6VAB6 950 aa27.56■■■□□ 2
PPP4R1-228ENST00000584074 CWC25Q9NXE8 425 aaPredicted RBP27.56■■■□□ 2
PPP4R1-228ENST00000584074 LARGE2Q8N3Y3 721 aa27.55■■■□□ 2
PPP4R1-228ENST00000584074 JARID2Q92833 1246 aaPredicted RBP27.55■■■□□ 2
PPP4R1-228ENST00000584074 L3MBTL3Q96JM7 780 aaPredicted RBP27.54■■■□□ 2
PPP4R1-228ENST00000584074 VAMP4O75379 141 aa27.53■■■□□ 2
PPP4R1-228ENST00000584074 PCCAP05165 728 aaPredicted RBP27.53■■■□□ 2
PPP4R1-228ENST00000584074 DPP8Q6V1X1 898 aaPredicted RBP27.53■■■□□ 2
PPP4R1-228ENST00000584074 CELF1Q92879 486 aaKnown RBP27.53■■■□□ 2
PPP4R1-228ENST00000584074 IGKV5-2P06315 115 aa27.52■■■□□ 2
PPP4R1-228ENST00000584074 MPNDQ8N594 471 aa27.52■■■□□ 2
PPP4R1-228ENST00000584074 RTFDC1Q9BY42 306 aaPredicted RBP27.52■■■□□ 2
PPP4R1-228ENST00000584074 IQCA1LA6NCM1 817 aa27.51■■□□□ 1.99
PPP4R1-228ENST00000584074 PPIP5K2O43314 1243 aa27.51■■□□□ 1.99
PPP4R1-228ENST00000584074 AOC3Q16853 763 aa27.51■■□□□ 1.99
PPP4R1-228ENST00000584074 POTEIP0CG38 1075 aa27.5■■□□□ 1.99
PPP4R1-228ENST00000584074 POTEJP0CG39 1038 aa27.5■■□□□ 1.99
PPP4R1-228ENST00000584074 TMC4Q7Z404 712 aa27.5■■□□□ 1.99
PPP4R1-228ENST00000584074 GPC2Q8N158 579 aa27.5■■□□□ 1.99
PPP4R1-228ENST00000584074 MYH16Q9H6N6 1097 aa27.5■■□□□ 1.99
PPP4R1-228ENST00000584074 TAF1P21675 1872 aa27.5■■□□□ 1.99
PPP4R1-228ENST00000584074 HSP90B1P14625 803 aaKnown RBP27.49■■□□□ 1.99
PPP4R1-228ENST00000584074 EIF6P56537 245 aaKnown RBP27.49■■□□□ 1.99
PPP4R1-228ENST00000584074 HTRA3P83110 453 aa27.49■■□□□ 1.99
PPP4R1-228ENST00000584074 FLIIQ13045 1269 aa27.49■■□□□ 1.99
PPP4R1-228ENST00000584074 NIM1KQ8IY84 436 aa27.49■■□□□ 1.99
PPP4R1-228ENST00000584074 SUPT20HQ8NEM7 779 aa27.49■■□□□ 1.99
PPP4R1-228ENST00000584074 TAF1DQ9H5J8 278 aaPredicted RBP27.49■■□□□ 1.99
PPP4R1-228ENST00000584074 COL4A1P02462 1669 aa27.49■■□□□ 1.99
PPP4R1-228ENST00000584074 NEXNQ0ZGT2 675 aa27.48■■□□□ 1.99
PPP4R1-228ENST00000584074 CWF19L2Q2TBE0 894 aaKnown RBP27.48■■□□□ 1.99
PPP4R1-228ENST00000584074 VPS33BQ9H267 617 aa27.48■■□□□ 1.99
PPP4R1-228ENST00000584074 GJA3Q9Y6H8 435 aa27.48■■□□□ 1.99
PPP4R1-228ENST00000584074 SEC31BQ9NQW1 1179 aa27.47■■□□□ 1.99
PPP4R1-228ENST00000584074 HACL1Q9UJ83 578 aa27.47■■□□□ 1.99
PPP4R1-228ENST00000584074 ZNF521Q96K83 1311 aa27.46■■□□□ 1.99
PPP4R1-228ENST00000584074 NEURL1BA8MQ27 555 aa27.46■■□□□ 1.99
PPP4R1-228ENST00000584074 PDE8AO60658 829 aa27.46■■□□□ 1.99
PPP4R1-228ENST00000584074 RPS8P62241 208 aaKnown RBP27.46■■□□□ 1.99
PPP4R1-228ENST00000584074 FKBP5Q13451 457 aaPredicted RBP27.46■■□□□ 1.99
PPP4R1-228ENST00000584074 DNAJC5GQ8N7S2 189 aa27.46■■□□□ 1.99
PPP4R1-228ENST00000584074 CHADLQ6NUI6 762 aa27.45■■□□□ 1.98
PPP4R1-228ENST00000584074 CCDC85AQ96PX6 553 aaPredicted RBP27.45■■□□□ 1.98
PPP4R1-228ENST00000584074 CDHR2Q9BYE9 1310 aa27.44■■□□□ 1.98
PPP4R1-228ENST00000584074 KIAA2012Q0VF49 1180 aa27.44■■□□□ 1.98
PPP4R1-228ENST00000584074 CCDC152Q4G0S7 254 aa27.44■■□□□ 1.98
PPP4R1-228ENST00000584074 NSFL1CQ9UNZ2 370 aaKnown RBP27.44■■□□□ 1.98
PPP4R1-228ENST00000584074 EPHX2P34913 555 aa27.43■■□□□ 1.98
PPP4R1-228ENST00000584074 ZNRF3Q9ULT6 936 aa27.43■■□□□ 1.98
PPP4R1-228ENST00000584074 LRRC37AA6NMS7 1700 aa27.43■■□□□ 1.98
PPP4R1-228ENST00000584074 DUOX1Q9NRD9 1551 aa27.43■■□□□ 1.98
PPP4R1-228ENST00000584074 SCN4AP35499 1836 aa27.42■■□□□ 1.98
PPP4R1-228ENST00000584074 GPSM2P81274 684 aa27.42■■□□□ 1.98
PPP4R1-228ENST00000584074 EAPPQ56P03 285 aaPredicted RBP27.42■■□□□ 1.98
PPP4R1-228ENST00000584074 DNAAF4Q8WXU2 420 aa27.42■■□□□ 1.98
PPP4R1-228ENST00000584074 LDHDQ86WU2 507 aa27.41■■□□□ 1.98
PPP4R1-228ENST00000584074 CTSWP56202 376 aa27.4■■□□□ 1.98
PPP4R1-228ENST00000584074 CXCL9Q07325 125 aa27.4■■□□□ 1.98
PPP4R1-228ENST00000584074 UBE3BQ7Z3V4 1068 aa27.4■■□□□ 1.98
PPP4R1-228ENST00000584074 POLLQ9UGP5 575 aa27.4■■□□□ 1.98
PPP4R1-228ENST00000584074 H7C1W4 665 aa27.39■■□□□ 1.98
PPP4R1-228ENST00000584074 SCNN1DP51172 638 aa27.39■■□□□ 1.98
PPP4R1-228ENST00000584074 GCKRQ14397 625 aa27.39■■□□□ 1.98
PPP4R1-228ENST00000584074 C6orf229H3BNL8 230 aa27.38■■□□□ 1.97
PPP4R1-228ENST00000584074 LINS1Q8NG48 757 aa27.38■■□□□ 1.97
PPP4R1-228ENST00000584074 TTLL11Q8NHH1 800 aa27.38■■□□□ 1.97
PPP4R1-228ENST00000584074 CLEC11AQ9Y240 323 aa27.38■■□□□ 1.97
PPP4R1-228ENST00000584074 F6X3S4 739 aa27.37■■□□□ 1.97
PPP4R1-228ENST00000584074 LMOD1P29536 600 aaPredicted RBP27.37■■□□□ 1.97
PPP4R1-228ENST00000584074 WASHC4Q2M389 1173 aa27.37■■□□□ 1.97
PPP4R1-228ENST00000584074 PNMA8AQ86V59 439 aaPredicted RBP27.37■■□□□ 1.97
PPP4R1-228ENST00000584074 RIMBP2O15034 1052 aa27.36■■□□□ 1.97
PPP4R1-228ENST00000584074 RAD17O75943 681 aa27.36■■□□□ 1.97
PPP4R1-228ENST00000584074 EPS15P42566 896 aa27.36■■□□□ 1.97
PPP4R1-228ENST00000584074 TBC1D16Q8TBP0 767 aa27.36■■□□□ 1.97
PPP4R1-228ENST00000584074 GPR101Q96P66 508 aaPredicted RBP27.36■■□□□ 1.97
PPP4R1-228ENST00000584074 YDJCA8MPS7 323 aa27.35■■□□□ 1.97
PPP4R1-228ENST00000584074 ANKRD18AQ8IVF6 992 aa27.35■■□□□ 1.97
PPP4R1-228ENST00000584074 GREM2Q9H772 168 aa27.35■■□□□ 1.97
PPP4R1-228ENST00000584074 LTBP1Q14766 1721 aa27.35■■□□□ 1.97
PPP4R1-228ENST00000584074 CCER2I3L3R5 266 aa27.34■■□□□ 1.97
PPP4R1-228ENST00000584074 CASP7P55210 303 aa27.34■■□□□ 1.97
PPP4R1-228ENST00000584074 CIAPIN1Q6FI81 312 aa27.34■■□□□ 1.97
PPP4R1-228ENST00000584074 KLRG1Q96E93 195 aa27.34■■□□□ 1.97
PPP4R1-228ENST00000584074 PODXL2Q9NZ53 605 aa27.34■■□□□ 1.97
PPP4R1-228ENST00000584074 ANKIB1Q9P2G1 1089 aa27.34■■□□□ 1.97
PPP4R1-228ENST00000584074 DBNDD1Q9H9R9 158 aa27.33■■□□□ 1.97
PPP4R1-228ENST00000584074 E9PSI1 815 aa27.32■■□□□ 1.96
PPP4R1-228ENST00000584074 GMPSP49915 693 aaPredicted RBP27.32■■□□□ 1.96
PPP4R1-228ENST00000584074 BEND3Q5T5X7 828 aa27.32■■□□□ 1.96
PPP4R1-228ENST00000584074 CDC5LQ99459 802 aaKnown RBP27.32■■□□□ 1.96
PPP4R1-228ENST00000584074 EYA3Q99504 573 aa27.32■■□□□ 1.96
PPP4R1-228ENST00000584074 GPRC5DQ9NZD1 345 aa27.32■■□□□ 1.96
PPP4R1-228ENST00000584074 ADAMTSL1Q8N6G6 1762 aa27.32■■□□□ 1.96
PPP4R1-228ENST00000584074 UFL1O94874 794 aa27.31■■□□□ 1.96
PPP4R1-228ENST00000584074 ITGBL1O95965 494 aaPredicted RBP27.31■■□□□ 1.96
PPP4R1-228ENST00000584074 TNIP1Q15025 636 aa27.31■■□□□ 1.96
PPP4R1-228ENST00000584074 DOK7Q18PE1 504 aa27.31■■□□□ 1.96
PPP4R1-228ENST00000584074 MAP1SQ66K74 1059 aaPredicted RBP27.31■■□□□ 1.96
PPP4R1-228ENST00000584074 PLA2G12BQ9BX93 195 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms