RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 FKBP5Q13451 457 aaPredicted RBP24.32■■□□□ 1.48
TRADD-203ENST00000563348 NEURL1BA8MQ27 555 aa24.31■■□□□ 1.48
TRADD-203ENST00000563348 E9PSI1 815 aa24.31■■□□□ 1.48
TRADD-203ENST00000563348 FZD9O00144 591 aa24.31■■□□□ 1.48
TRADD-203ENST00000563348 PDE8AO60658 829 aa24.31■■□□□ 1.48
TRADD-203ENST00000563348 DNAAF4Q8WXU2 420 aa24.31■■□□□ 1.48
TRADD-203ENST00000563348 JDP2Q8WYK2 163 aa24.31■■□□□ 1.48
TRADD-203ENST00000563348 CELF1Q92879 486 aaKnown RBP24.31■■□□□ 1.48
TRADD-203ENST00000563348 TIAM2Q8IVF5 1701 aa24.3■■□□□ 1.48
TRADD-203ENST00000563348 LAMB2P55268 1798 aa24.3■■□□□ 1.48
TRADD-203ENST00000563348 CWF19L2Q2TBE0 894 aaKnown RBP24.3■■□□□ 1.48
TRADD-203ENST00000563348 MPNDQ8N594 471 aa24.3■■□□□ 1.48
TRADD-203ENST00000563348 RTFDC1Q9BY42 306 aaPredicted RBP24.3■■□□□ 1.48
TRADD-203ENST00000563348 VPS33BQ9H267 617 aa24.3■■□□□ 1.48
TRADD-203ENST00000563348 CDHR2Q9BYE9 1310 aa24.3■■□□□ 1.48
TRADD-203ENST00000563348 SLFN5Q08AF3 891 aa24.29■■□□□ 1.48
TRADD-203ENST00000563348 LARGE2Q8N3Y3 721 aa24.29■■□□□ 1.48
TRADD-203ENST00000563348 DDX60Q8IY21 1712 aaKnown RBP24.29■■□□□ 1.48
TRADD-203ENST00000563348 HSPA6P17066 643 aa24.28■■□□□ 1.48
TRADD-203ENST00000563348 RPS8P62241 208 aaKnown RBP24.28■■□□□ 1.48
TRADD-203ENST00000563348 DIEXFQ68CQ4 756 aaKnown RBP24.28■■□□□ 1.48
TRADD-203ENST00000563348 DPP8Q6V1X1 898 aaPredicted RBP24.28■■□□□ 1.48
TRADD-203ENST00000563348 SUPT20HQ8NEM7 779 aa24.28■■□□□ 1.48
TRADD-203ENST00000563348 CACNA1FO60840 1977 aa24.28■■□□□ 1.48
TRADD-203ENST00000563348 H7C1W4 665 aa24.27■■□□□ 1.48
TRADD-203ENST00000563348 CCDC152Q4G0S7 254 aa24.27■■□□□ 1.48
TRADD-203ENST00000563348 LINS1Q8NG48 757 aa24.27■■□□□ 1.48
TRADD-203ENST00000563348 FSTL1Q12841 308 aa24.26■■□□□ 1.47
TRADD-203ENST00000563348 GCKRQ14397 625 aa24.26■■□□□ 1.47
TRADD-203ENST00000563348 L3MBTL3Q96JM7 780 aaPredicted RBP24.26■■□□□ 1.47
TRADD-203ENST00000563348 SEC31BQ9NQW1 1179 aa24.26■■□□□ 1.47
TRADD-203ENST00000563348 ZNF541Q9H0D2 1346 aa24.26■■□□□ 1.47
TRADD-203ENST00000563348 PPIP5K2O43314 1243 aa24.25■■□□□ 1.47
TRADD-203ENST00000563348 WDR90Q96KV7 1748 aa24.24■■□□□ 1.47
TRADD-203ENST00000563348 EIF6P56537 245 aaKnown RBP24.24■■□□□ 1.47
TRADD-203ENST00000563348 AOC3Q16853 763 aa24.24■■□□□ 1.47
TRADD-203ENST00000563348 MIER1Q8N108 512 aa24.24■■□□□ 1.47
TRADD-203ENST00000563348 CDCA7LQ96GN5 454 aa24.24■■□□□ 1.47
TRADD-203ENST00000563348 F6X3S4 739 aa24.23■■□□□ 1.47
TRADD-203ENST00000563348 UBE3BQ7Z3V4 1068 aa24.23■■□□□ 1.47
TRADD-203ENST00000563348 NIM1KQ8IY84 436 aa24.23■■□□□ 1.47
TRADD-203ENST00000563348 SMC1BQ8NDV3 1235 aa24.23■■□□□ 1.47
TRADD-203ENST00000563348 CCDC85AQ96PX6 553 aaPredicted RBP24.23■■□□□ 1.47
TRADD-203ENST00000563348 TAF1P21675 1872 aa24.23■■□□□ 1.47
TRADD-203ENST00000563348 IQCA1LA6NCM1 817 aa24.22■■□□□ 1.47
TRADD-203ENST00000563348 CTSWP56202 376 aa24.22■■□□□ 1.47
TRADD-203ENST00000563348 BEND3Q5T5X7 828 aa24.22■■□□□ 1.47
TRADD-203ENST00000563348 TRMT2AQ8IZ69 625 aaKnown RBP24.22■■□□□ 1.47
TRADD-203ENST00000563348 GPC2Q8N158 579 aa24.22■■□□□ 1.47
TRADD-203ENST00000563348 TTLL11Q8NHH1 800 aa24.22■■□□□ 1.47
TRADD-203ENST00000563348 NSFL1CQ9UNZ2 370 aaKnown RBP24.22■■□□□ 1.47
TRADD-203ENST00000563348 KIAA2012Q0VF49 1180 aa24.21■■□□□ 1.47
TRADD-203ENST00000563348 PLA2G12BQ9BX93 195 aa24.21■■□□□ 1.47
TRADD-203ENST00000563348 COL4A5P29400 1685 aa24.21■■□□□ 1.47
TRADD-203ENST00000563348 CASP7P55210 303 aa24.2■■□□□ 1.46
TRADD-203ENST00000563348 GPSM2P81274 684 aa24.2■■□□□ 1.46
TRADD-203ENST00000563348 MRPL50Q8N5N7 158 aaKnown RBP24.2■■□□□ 1.46
TRADD-203ENST00000563348 ZNRF3Q9ULT6 936 aa24.2■■□□□ 1.46
TRADD-203ENST00000563348 TAF1DQ9H5J8 278 aaPredicted RBP24.19■■□□□ 1.46
TRADD-203ENST00000563348 ANKRD18AQ8IVF6 992 aa24.18■■□□□ 1.46
TRADD-203ENST00000563348 POLLQ9UGP5 575 aa24.18■■□□□ 1.46
TRADD-203ENST00000563348 HACL1Q9UJ83 578 aa24.18■■□□□ 1.46
TRADD-203ENST00000563348 GJA3Q9Y6H8 435 aa24.18■■□□□ 1.46
TRADD-203ENST00000563348 COL4A1P02462 1669 aa24.18■■□□□ 1.46
TRADD-203ENST00000563348 APLP1P51693 650 aa24.17■■□□□ 1.46
TRADD-203ENST00000563348 SSH1Q8WYL5 1049 aa24.17■■□□□ 1.46
TRADD-203ENST00000563348 CDC5LQ99459 802 aaKnown RBP24.17■■□□□ 1.46
TRADD-203ENST00000563348 GREM2Q9H772 168 aa24.17■■□□□ 1.46
TRADD-203ENST00000563348 PODXL2Q9NZ53 605 aa24.17■■□□□ 1.46
TRADD-203ENST00000563348 CEP350Q5VT06 3117 aa24.17■■□□□ 1.46
TRADD-203ENST00000563348 RTL9Q8NET4 1388 aa24.16■■□□□ 1.46
TRADD-203ENST00000563348 C6orf229H3BNL8 230 aa24.16■■□□□ 1.46
TRADD-203ENST00000563348 CSF1RP07333 972 aa24.16■■□□□ 1.46
TRADD-203ENST00000563348 WASHC4Q2M389 1173 aa24.16■■□□□ 1.46
TRADD-203ENST00000563348 CXCL9Q07325 125 aa24.15■■□□□ 1.46
TRADD-203ENST00000563348 TBC1D16Q8TBP0 767 aa24.15■■□□□ 1.46
TRADD-203ENST00000563348 LRRC37AA6NMS7 1700 aa24.14■■□□□ 1.45
TRADD-203ENST00000563348 ALDH1L1O75891 902 aa24.14■■□□□ 1.45
TRADD-203ENST00000563348 POTEIP0CG38 1075 aa24.14■■□□□ 1.45
TRADD-203ENST00000563348 POTEJP0CG39 1038 aa24.14■■□□□ 1.45
TRADD-203ENST00000563348 EPHX2P34913 555 aa24.14■■□□□ 1.45
TRADD-203ENST00000563348 SLC4A10Q6U841 1118 aa24.14■■□□□ 1.45
TRADD-203ENST00000563348 EYA3Q99504 573 aa24.14■■□□□ 1.45
TRADD-203ENST00000563348 BSDC1Q9NW68 430 aaPredicted RBP24.14■■□□□ 1.45
TRADD-203ENST00000563348 ANKIB1Q9P2G1 1089 aa24.14■■□□□ 1.45
TRADD-203ENST00000563348 ALDH1L2Q3SY69 923 aa24.13■■□□□ 1.45
TRADD-203ENST00000563348 CHADLQ6NUI6 762 aa24.13■■□□□ 1.45
TRADD-203ENST00000563348 SRCIN1Q9C0H9 1055 aa24.13■■□□□ 1.45
TRADD-203ENST00000563348 DUOX1Q9NRD9 1551 aa24.12■■□□□ 1.45
TRADD-203ENST00000563348 SCN4AP35499 1836 aa24.12■■□□□ 1.45
TRADD-203ENST00000563348 GRM8O00222 908 aa24.12■■□□□ 1.45
TRADD-203ENST00000563348 RIMBP2O15034 1052 aa24.12■■□□□ 1.45
TRADD-203ENST00000563348 CT47B1P0C2W7 299 aaPredicted RBP24.12■■□□□ 1.45
TRADD-203ENST00000563348 PNMA8AQ86V59 439 aaPredicted RBP24.12■■□□□ 1.45
TRADD-203ENST00000563348 LDHDQ86WU2 507 aa24.12■■□□□ 1.45
TRADD-203ENST00000563348 PTPRCP08575 1304 aa24.11■■□□□ 1.45
TRADD-203ENST00000563348 LMOD1P29536 600 aaPredicted RBP24.11■■□□□ 1.45
TRADD-203ENST00000563348 SCNN1DP51172 638 aa24.11■■□□□ 1.45
TRADD-203ENST00000563348 CIAPIN1Q6FI81 312 aa24.11■■□□□ 1.45
TRADD-203ENST00000563348 ZC3H12CQ9C0D7 883 aaKnown RBP24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms