RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 NRLP54845 237 aa2.96□□□□□ -1.94
HIF1A-212ENST00000557538 HSH2DQ96JZ2 352 aa2.96□□□□□ -1.94
HIF1A-212ENST00000557538 FRRS1LQ9P0K9 344 aa2.96□□□□□ -1.94
HIF1A-212ENST00000557538 GMPR2Q9P2T1 348 aaKnown RBP2.96□□□□□ -1.94
HIF1A-212ENST00000557538 EIF4EBP3O60516 100 aaPredicted RBP2.95□□□□□ -1.94
HIF1A-212ENST00000557538 MAPTP10636 758 aaKnown RBP2.95□□□□□ -1.94
HIF1A-212ENST00000557538 XRCC5P13010 732 aaKnown RBP2.95□□□□□ -1.94
HIF1A-212ENST00000557538 MAP2K3P46734 347 aa2.95□□□□□ -1.94
HIF1A-212ENST00000557538 FOXR1Q6PIV2 292 aa2.95□□□□□ -1.94
HIF1A-212ENST00000557538 ELP3Q9H9T3 547 aa2.95□□□□□ -1.94
HIF1A-212ENST00000557538 UBAP1LF5GYI3 381 aa2.95□□□□□ -1.94
HIF1A-212ENST00000557538 SNRPBP14678 240 aaKnown RBP2.95□□□□□ -1.94
HIF1A-212ENST00000557538 ZNF468Q5VIY5 522 aaPredicted RBP2.95□□□□□ -1.94
HIF1A-212ENST00000557538 BICDL1Q6ZP65 573 aa2.95□□□□□ -1.94
HIF1A-212ENST00000557538 ATCAYQ86WG3 371 aa2.95□□□□□ -1.94
HIF1A-212ENST00000557538 SUV39H2Q9H5I1 410 aa2.95□□□□□ -1.94
HIF1A-212ENST00000557538 RUBCNLQ9H714 662 aa2.95□□□□□ -1.94
HIF1A-212ENST00000557538 BRD7Q9NPI1 651 aa2.95□□□□□ -1.94
HIF1A-212ENST00000557538 USP31Q70CQ4 1352 aa2.95□□□□□ -1.94
HIF1A-212ENST00000557538 E9PSI1 815 aa2.95□□□□□ -1.94
HIF1A-212ENST00000557538 EIF1AYO14602 144 aaKnown RBP2.95□□□□□ -1.94
HIF1A-212ENST00000557538 XYLBO75191 536 aa2.95□□□□□ -1.94
HIF1A-212ENST00000557538 SLURP2P0DP57 97 aa2.95□□□□□ -1.94
HIF1A-212ENST00000557538 RHOQP17081 205 aa2.95□□□□□ -1.94
HIF1A-212ENST00000557538 FGFR3P22607 806 aa2.95□□□□□ -1.94
HIF1A-212ENST00000557538 GNA15P30679 374 aa2.95□□□□□ -1.94
HIF1A-212ENST00000557538 BHLHE41Q9C0J9 482 aaPredicted RBP2.95□□□□□ -1.94
HIF1A-212ENST00000557538 NXF1Q9UBU9 619 aaKnown RBP2.95□□□□□ -1.94
HIF1A-212ENST00000557538 GTF3C5Q9Y5Q8 519 aaPredicted RBP2.95□□□□□ -1.94
HIF1A-212ENST00000557538 FIGNL2A6NMB9 653 aa2.94□□□□□ -1.94
HIF1A-212ENST00000557538 GPLD1P80108 840 aa2.94□□□□□ -1.94
HIF1A-212ENST00000557538 ATP2B2Q01814 1243 aa2.94□□□□□ -1.94
HIF1A-212ENST00000557538 GLIS3Q8NEA6 775 aa2.94□□□□□ -1.94
HIF1A-212ENST00000557538 MBIPQ9NS73 344 aa2.94□□□□□ -1.94
HIF1A-212ENST00000557538 ABI2Q9NYB9 513 aaPredicted RBP2.94□□□□□ -1.94
HIF1A-212ENST00000557538 TMEM63CQ9P1W3 806 aa2.94□□□□□ -1.94
HIF1A-212ENST00000557538 PPM1HQ9ULR3 514 aa2.94□□□□□ -1.94
HIF1A-212ENST00000557538 LDHBP07195 334 aaKnown RBP2.94□□□□□ -1.94
HIF1A-212ENST00000557538 SFSWAPQ12872 951 aaKnown RBP2.94□□□□□ -1.94
HIF1A-212ENST00000557538 TMEM102Q8N9M5 508 aaPredicted RBP2.94□□□□□ -1.94
HIF1A-212ENST00000557538 GPR152Q8TDT2 470 aa2.94□□□□□ -1.94
HIF1A-212ENST00000557538 AIDAQ96BJ3 306 aa2.94□□□□□ -1.94
HIF1A-212ENST00000557538 CEP63Q96MT8 703 aa2.94□□□□□ -1.94
HIF1A-212ENST00000557538 ADAM19Q9H013 955 aa2.94□□□□□ -1.94
HIF1A-212ENST00000557538 STRN4Q9NRL3 753 aa2.94□□□□□ -1.94
HIF1A-212ENST00000557538 ZFATQ9P243 1243 aa2.94□□□□□ -1.94
HIF1A-212ENST00000557538 TRAK1Q9UPV9 953 aa2.94□□□□□ -1.94
HIF1A-212ENST00000557538 DNM1Q05193 864 aaKnown RBP2.94□□□□□ -1.94
HIF1A-212ENST00000557538 GAS6Q14393 721 aa2.94□□□□□ -1.94
HIF1A-212ENST00000557538 ARSJQ5FYB0 599 aaPredicted RBP2.94□□□□□ -1.94
HIF1A-212ENST00000557538 ZNF438Q7Z4V0 828 aa2.94□□□□□ -1.94
HIF1A-212ENST00000557538 CCDC74AQ96AQ1 378 aa2.94□□□□□ -1.94
HIF1A-212ENST00000557538 TRERF1Q96PN7 1200 aa2.94□□□□□ -1.94
HIF1A-212ENST00000557538 C12orf49Q9H741 205 aa2.94□□□□□ -1.94
HIF1A-212ENST00000557538 CNTN3Q9P232 1028 aa2.94□□□□□ -1.94
HIF1A-212ENST00000557538 NFX1Q12986 1120 aaKnown RBP2.93□□□□□ -1.94
HIF1A-212ENST00000557538 NIF3L1Q9GZT8 377 aa2.93□□□□□ -1.94
HIF1A-212ENST00000557538 SPG7Q9UQ90 795 aa2.93□□□□□ -1.94
HIF1A-212ENST00000557538 GJA3Q9Y6H8 435 aa2.93□□□□□ -1.94
HIF1A-212ENST00000557538 RECKO95980 971 aa2.93□□□□□ -1.94
HIF1A-212ENST00000557538 ITPKAP23677 461 aa2.93□□□□□ -1.94
HIF1A-212ENST00000557538 PLAURQ03405 335 aa2.93□□□□□ -1.94
HIF1A-212ENST00000557538 SPEM2Q0P670 501 aa2.93□□□□□ -1.94
HIF1A-212ENST00000557538 TTC39BQ5VTQ0 682 aaPredicted RBP2.93□□□□□ -1.94
HIF1A-212ENST00000557538 CEP120Q8N960 986 aa2.93□□□□□ -1.94
HIF1A-212ENST00000557538 SLC43A3Q8NBI5 491 aa2.93□□□□□ -1.94
HIF1A-212ENST00000557538 FOXD4L4Q8WXT5 416 aaPredicted RBP2.93□□□□□ -1.94
HIF1A-212ENST00000557538 SLC30A3Q99726 388 aa2.93□□□□□ -1.94
HIF1A-212ENST00000557538 KCNQ5Q9NR82 932 aa2.93□□□□□ -1.94
HIF1A-212ENST00000557538 PARP2Q9UGN5 583 aa2.93□□□□□ -1.94
HIF1A-212ENST00000557538 NSFL1CQ9UNZ2 370 aaKnown RBP2.93□□□□□ -1.94
HIF1A-212ENST00000557538 PNMA6FA0A0J9YX94 578 aa2.92□□□□□ -1.94
HIF1A-212ENST00000557538 NFKBIEO00221 500 aa2.92□□□□□ -1.94
HIF1A-212ENST00000557538 C2CD2LO14523 706 aa2.92□□□□□ -1.94
HIF1A-212ENST00000557538 HYAL2Q12891 473 aa2.92□□□□□ -1.94
HIF1A-212ENST00000557538 NEUROD1Q13562 356 aa2.92□□□□□ -1.94
HIF1A-212ENST00000557538 LCE2AQ5TA79 106 aaPredicted RBP2.92□□□□□ -1.94
HIF1A-212ENST00000557538 KANK3Q6NY19 840 aa2.92□□□□□ -1.94
HIF1A-212ENST00000557538 GIPC2Q8TF65 315 aa2.92□□□□□ -1.94
HIF1A-212ENST00000557538 MRRFQ96E11 262 aaKnown RBP2.92□□□□□ -1.94
HIF1A-212ENST00000557538 SOX17Q9H6I2 414 aaPredicted RBP2.92□□□□□ -1.94
HIF1A-212ENST00000557538 FAM8A1Q9UBU6 413 aa2.92□□□□□ -1.94
HIF1A-212ENST00000557538 SCAMP3O14828 347 aaKnown RBP2.92□□□□□ -1.94
HIF1A-212ENST00000557538 PHACTR2O75167 634 aa2.92□□□□□ -1.94
HIF1A-212ENST00000557538 EDN3P14138 238 aa2.92□□□□□ -1.94
HIF1A-212ENST00000557538 SRSF11Q05519 484 aaKnown RBP2.92□□□□□ -1.94
HIF1A-212ENST00000557538 GAS2L1Q99501 681 aaPredicted RBP2.92□□□□□ -1.94
HIF1A-212ENST00000557538 KLF15Q9UIH9 416 aa2.92□□□□□ -1.94
HIF1A-212ENST00000557538 A0A1W2PP55 124 aa2.92□□□□□ -1.94
HIF1A-212ENST00000557538 TERTO14746 1132 aaKnown RBP2.92□□□□□ -1.94
HIF1A-212ENST00000557538 SLCO4C1Q6ZQN7 724 aa2.92□□□□□ -1.94
HIF1A-212ENST00000557538 SV2BQ7L1I2 683 aa2.92□□□□□ -1.94
HIF1A-212ENST00000557538 C1orf127Q8N9H9 656 aa2.92□□□□□ -1.94
HIF1A-212ENST00000557538 WNT8BQ93098 351 aa2.92□□□□□ -1.94
HIF1A-212ENST00000557538 TCF12Q99081 682 aa2.92□□□□□ -1.94
HIF1A-212ENST00000557538 NOC4LQ9BVI4 516 aaKnown RBP2.92□□□□□ -1.94
HIF1A-212ENST00000557538 CACNA2D2Q9NY47 1150 aa2.92□□□□□ -1.94
HIF1A-212ENST00000557538 C11orf95C9JLR9 678 aaPredicted RBP2.91□□□□□ -1.94
HIF1A-212ENST00000557538 PEAR1Q5VY43 1037 aaPredicted RBP2.91□□□□□ -1.94
HIF1A-212ENST00000557538 C20orf204Q6ZNR8 217 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms