RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 CHD1LQ86WJ1 897 aa34.5■■■■□ 3.11
CCM2-218ENST00000541586 NLRP3Q96P20 1036 aa34.5■■■■□ 3.11
CCM2-218ENST00000541586 NRXN2Q9P2S2 1712 aa34.48■■■■□ 3.11
CCM2-218ENST00000541586 CDHR2Q9BYE9 1310 aa34.47■■■■□ 3.11
CCM2-218ENST00000541586 SUCLG2Q96I99 432 aa34.47■■■■□ 3.11
CCM2-218ENST00000541586 LNPKQ9C0E8 428 aa34.47■■■■□ 3.11
CCM2-218ENST00000541586 PDE8AO60658 829 aa34.47■■■■□ 3.11
CCM2-218ENST00000541586 PDE4AP27815 886 aa34.47■■■■□ 3.11
CCM2-218ENST00000541586 C3orf67Q6ZVT6 689 aa34.47■■■■□ 3.11
CCM2-218ENST00000541586 HSP90B1P14625 803 aaKnown RBP34.46■■■■□ 3.11
CCM2-218ENST00000541586 PDE6BP35913 854 aa34.46■■■■□ 3.11
CCM2-218ENST00000541586 SSH3Q8TE77 659 aa34.46■■■■□ 3.11
CCM2-218ENST00000541586 CCDC85AQ96PX6 553 aaPredicted RBP34.46■■■■□ 3.11
CCM2-218ENST00000541586 KAZALD1Q96I82 304 aa34.44■■■■□ 3.1
CCM2-218ENST00000541586 FHDC1Q9C0D6 1143 aaPredicted RBP34.44■■■■□ 3.1
CCM2-218ENST00000541586 MTX1Q13505 466 aa34.44■■■■□ 3.1
CCM2-218ENST00000541586 POLA2Q14181 598 aa34.44■■■■□ 3.1
CCM2-218ENST00000541586 SRGAP3O43295 1099 aa34.43■■■■□ 3.1
CCM2-218ENST00000541586 EPHA10Q5JZY3 1008 aa34.43■■■■□ 3.1
CCM2-218ENST00000541586 C10orf71Q711Q0 1435 aa34.43■■■■□ 3.1
CCM2-218ENST00000541586 CD2APQ9Y5K6 639 aa34.43■■■■□ 3.1
CCM2-218ENST00000541586 CHRNA5P30532 468 aa34.42■■■■□ 3.1
CCM2-218ENST00000541586 C2CD5Q86YS7 1000 aa34.42■■■■□ 3.1
CCM2-218ENST00000541586 A0A0G2JLW4 131 aa34.41■■■■□ 3.1
CCM2-218ENST00000541586 CHMP3Q9Y3E7 222 aa34.41■■■■□ 3.1
CCM2-218ENST00000541586 H0YIN7 160 aa34.41■■■■□ 3.1
CCM2-218ENST00000541586 BICC1Q9H694 974 aaKnown RBP34.41■■■■□ 3.1
CCM2-218ENST00000541586 CTSWP56202 376 aa34.4■■■■□ 3.1
CCM2-218ENST00000541586 FOXO4P98177 505 aa34.4■■■■□ 3.1
CCM2-218ENST00000541586 PLA2G12BQ9BX93 195 aa34.4■■■■□ 3.1
CCM2-218ENST00000541586 EXOC6BQ9Y2D4 811 aa34.39■■■■□ 3.1
CCM2-218ENST00000541586 TGFB2P61812 414 aa34.38■■■■□ 3.09
CCM2-218ENST00000541586 LMBR1LQ6UX01 489 aa34.38■■■■□ 3.09
CCM2-218ENST00000541586 RPGRQ92834 1020 aaKnown RBP34.38■■■■□ 3.09
CCM2-218ENST00000541586 ZNF622Q969S3 477 aaKnown RBP eCLIP34.38■■■■□ 3.09
CCM2-218ENST00000541586 DPEP1P16444 411 aa34.38■■■■□ 3.09
CCM2-218ENST00000541586 TTLL11Q8NHH1 800 aa34.38■■■■□ 3.09
CCM2-218ENST00000541586 KLRG2A4D1S0 409 aaPredicted RBP34.37■■■■□ 3.09
CCM2-218ENST00000541586 APBB1O00213 710 aa34.37■■■■□ 3.09
CCM2-218ENST00000541586 NLGN2Q8NFZ4 835 aa34.37■■■■□ 3.09
CCM2-218ENST00000541586 WWC3Q9ULE0 1092 aa34.37■■■■□ 3.09
CCM2-218ENST00000541586 ANKRD31Q8N7Z5 1873 aa34.36■■■■□ 3.09
CCM2-218ENST00000541586 DDX60Q8IY21 1712 aaKnown RBP34.36■■■■□ 3.09
CCM2-218ENST00000541586 CCDC152Q4G0S7 254 aa34.36■■■■□ 3.09
CCM2-218ENST00000541586 SYT17Q9BSW7 474 aa34.36■■■■□ 3.09
CCM2-218ENST00000541586 SRGNP10124 158 aa34.35■■■■□ 3.09
CCM2-218ENST00000541586 SF3B3Q15393 1217 aaKnown RBP34.35■■■■□ 3.09
CCM2-218ENST00000541586 ZBTB47Q9UFB7 747 aaPredicted RBP34.35■■■■□ 3.09
CCM2-218ENST00000541586 GOLGB1Q14789 3259 aaKnown RBP34.35■■■■□ 3.09
CCM2-218ENST00000541586 TNRC6CQ9HCJ0 1690 aaKnown RBP34.35■■■■□ 3.09
CCM2-218ENST00000541586 CRY2Q49AN0 593 aa34.35■■■■□ 3.09
CCM2-218ENST00000541586 GREM2Q9H772 168 aa34.34■■■■□ 3.09
CCM2-218ENST00000541586 SMARCA5O60264 1052 aaPredicted RBP34.33■■■■□ 3.09
CCM2-218ENST00000541586 CSF1RP07333 972 aa34.33■■■■□ 3.09
CCM2-218ENST00000541586 MASTLQ96GX5 879 aa34.33■■■■□ 3.09
CCM2-218ENST00000541586 RIC1Q4ADV7 1423 aa34.33■■■■□ 3.09
CCM2-218ENST00000541586 DDX46Q7L014 1031 aaKnown RBP34.33■■■■□ 3.09
CCM2-218ENST00000541586 RBM17Q96I25 401 aaKnown RBP34.33■■■■□ 3.09
CCM2-218ENST00000541586 SEC31BQ9NQW1 1179 aa34.33■■■■□ 3.09
CCM2-218ENST00000541586 NPR1P16066 1061 aa34.32■■■■□ 3.08
CCM2-218ENST00000541586 FAM161AQ3B820 660 aa34.32■■■■□ 3.08
CCM2-218ENST00000541586 SURF6O75683 361 aaKnown RBP34.31■■■■□ 3.08
CCM2-218ENST00000541586 KCNA3P22001 575 aa34.3■■■■□ 3.08
CCM2-218ENST00000541586 BACH2Q9BYV9 841 aa34.3■■■■□ 3.08
CCM2-218ENST00000541586 LRRCC1Q9C099 1032 aa34.3■■■■□ 3.08
CCM2-218ENST00000541586 ITGA6P23229 1130 aa34.29■■■■□ 3.08
CCM2-218ENST00000541586 RABL6Q3YEC7 729 aaPredicted RBP34.29■■■■□ 3.08
CCM2-218ENST00000541586 KIF13BQ9NQT8 1826 aa34.29■■■■□ 3.08
CCM2-218ENST00000541586 CCDC57Q2TAC2 916 aa34.28■■■■□ 3.08
CCM2-218ENST00000541586 C16orf71Q8IYS4 520 aaPredicted RBP34.28■■■■□ 3.08
CCM2-218ENST00000541586 LRP5O75197 1615 aa34.27■■■■□ 3.08
CCM2-218ENST00000541586 RAB11FIP3O75154 756 aa34.27■■■■□ 3.08
CCM2-218ENST00000541586 IFIT5Q13325 482 aaKnown RBP34.27■■■■□ 3.08
CCM2-218ENST00000541586 BCL11AQ9H165 835 aa34.27■■■■□ 3.08
CCM2-218ENST00000541586 NOP58Q9Y2X3 529 aaKnown RBP34.27■■■■□ 3.08
CCM2-218ENST00000541586 STYK1Q6J9G0 422 aa34.27■■■■□ 3.08
CCM2-218ENST00000541586 PIM2Q9P1W9 311 aa34.27■■■■□ 3.08
CCM2-218ENST00000541586 LAMB2P55268 1798 aa34.27■■■■□ 3.08
CCM2-218ENST00000541586 MYH3P11055 1940 aa34.26■■■■□ 3.07
CCM2-218ENST00000541586 ALDH1B1P30837 517 aa34.26■■■■□ 3.07
CCM2-218ENST00000541586 HOXA10P31260 410 aaPredicted RBP34.26■■■■□ 3.07
CCM2-218ENST00000541586 ANKRD18BA2A2Z9 1011 aa34.25■■■■□ 3.07
CCM2-218ENST00000541586 C8orf34Q49A92 452 aa34.25■■■■□ 3.07
CCM2-218ENST00000541586 CELF1Q92879 486 aaKnown RBP34.25■■■■□ 3.07
CCM2-218ENST00000541586 HSP90AB4PQ58FF6 505 aa34.24■■■■□ 3.07
CCM2-218ENST00000541586 CNKSR1Q969H4 720 aa34.24■■■■□ 3.07
CCM2-218ENST00000541586 PA2G4Q9UQ80 394 aaKnown RBP34.24■■■■□ 3.07
CCM2-218ENST00000541586 TAF7LQ5H9L4 462 aa34.24■■■■□ 3.07
CCM2-218ENST00000541586 PLEKHM2Q8IWE5 1019 aa34.24■■■■□ 3.07
CCM2-218ENST00000541586 TTLL6Q8N841 843 aa34.24■■■■□ 3.07
CCM2-218ENST00000541586 CRAMP1Q96RY5 1269 aa34.24■■■■□ 3.07
CCM2-218ENST00000541586 GRAPQ13588 217 aa34.23■■■■□ 3.07
CCM2-218ENST00000541586 GRAPLQ8TC17 118 aaPredicted RBP34.23■■■■□ 3.07
CCM2-218ENST00000541586 ZNF594Q96JF6 807 aaPredicted RBP34.23■■■■□ 3.07
CCM2-218ENST00000541586 ZNF219Q9P2Y4 722 aaPredicted RBP34.23■■■■□ 3.07
CCM2-218ENST00000541586 RBM19Q9Y4C8 960 aaKnown RBP34.23■■■■□ 3.07
CCM2-218ENST00000541586 COL11A2P13942 1736 aaPredicted RBP34.23■■■■□ 3.07
CCM2-218ENST00000541586 OTUD7AQ8TE49 926 aaPredicted RBP34.22■■■■□ 3.07
CCM2-218ENST00000541586 RPS8P62241 208 aaKnown RBP34.21■■■■□ 3.07
CCM2-218ENST00000541586 KLHDC4Q8TBB5 520 aa34.21■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms