RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 WDR90Q96KV7 1748 aa22.09■■□□□ 1.13
CCNC-213ENST00000523541 EXOSC9Q06265 439 aaKnown RBP22.09■■□□□ 1.13
CCNC-213ENST00000523541 ZNF521Q96K83 1311 aa22.08■■□□□ 1.13
CCNC-213ENST00000523541 IQCA1LA6NCM1 817 aa22.08■■□□□ 1.13
CCNC-213ENST00000523541 FZD9O00144 591 aa22.08■■□□□ 1.13
CCNC-213ENST00000523541 LARGE2Q8N3Y3 721 aa22.08■■□□□ 1.13
CCNC-213ENST00000523541 RTFDC1Q9BY42 306 aaPredicted RBP22.08■■□□□ 1.13
CCNC-213ENST00000523541 EIF6P56537 245 aaKnown RBP22.07■■□□□ 1.12
CCNC-213ENST00000523541 ZNF541Q9H0D2 1346 aa22.06■■□□□ 1.12
CCNC-213ENST00000523541 PDE8AO60658 829 aa22.06■■□□□ 1.12
CCNC-213ENST00000523541 FLIIQ13045 1269 aa22.06■■□□□ 1.12
CCNC-213ENST00000523541 L3MBTL3Q96JM7 780 aaPredicted RBP22.06■■□□□ 1.12
CCNC-213ENST00000523541 SPINK5Q9NQ38 1064 aaPredicted RBP22.06■■□□□ 1.12
CCNC-213ENST00000523541 POTECB2RU33 542 aa22.05■■□□□ 1.12
CCNC-213ENST00000523541 PPIP5K2O43314 1243 aa22.05■■□□□ 1.12
CCNC-213ENST00000523541 MPNDQ8N594 471 aa22.05■■□□□ 1.12
CCNC-213ENST00000523541 GJA3Q9Y6H8 435 aa22.05■■□□□ 1.12
CCNC-213ENST00000523541 CDHR2Q9BYE9 1310 aa22.05■■□□□ 1.12
CCNC-213ENST00000523541 LAMB2P55268 1798 aa22.04■■□□□ 1.12
CCNC-213ENST00000523541 IGKV5-2P06315 115 aa22.04■■□□□ 1.12
CCNC-213ENST00000523541 HTRA3P83110 453 aa22.04■■□□□ 1.12
CCNC-213ENST00000523541 CCDC152Q4G0S7 254 aa22.04■■□□□ 1.12
CCNC-213ENST00000523541 EAPPQ56P03 285 aaPredicted RBP22.04■■□□□ 1.12
CCNC-213ENST00000523541 DPP8Q6V1X1 898 aaPredicted RBP22.04■■□□□ 1.12
CCNC-213ENST00000523541 G2E3Q7L622 706 aa22.04■■□□□ 1.12
CCNC-213ENST00000523541 SLC51AQ86UW1 340 aa22.04■■□□□ 1.12
CCNC-213ENST00000523541 NIM1KQ8IY84 436 aa22.04■■□□□ 1.12
CCNC-213ENST00000523541 E9PSI1 815 aa22.03■■□□□ 1.12
CCNC-213ENST00000523541 RPS8P62241 208 aaKnown RBP22.03■■□□□ 1.12
CCNC-213ENST00000523541 GPC2Q8N158 579 aa22.03■■□□□ 1.12
CCNC-213ENST00000523541 FKBP5Q13451 457 aaPredicted RBP22.02■■□□□ 1.12
CCNC-213ENST00000523541 HACL1Q9UJ83 578 aa22.02■■□□□ 1.12
CCNC-213ENST00000523541 CLEC11AQ9Y240 323 aa22.02■■□□□ 1.12
CCNC-213ENST00000523541 NEURL1BA8MQ27 555 aa22.01■■□□□ 1.11
CCNC-213ENST00000523541 AOC3Q16853 763 aa22.01■■□□□ 1.11
CCNC-213ENST00000523541 CHADLQ6NUI6 762 aa22.01■■□□□ 1.11
CCNC-213ENST00000523541 LINS1Q8NG48 757 aa22.01■■□□□ 1.11
CCNC-213ENST00000523541 DNAAF4Q8WXU2 420 aa22.01■■□□□ 1.11
CCNC-213ENST00000523541 CACNA1FO60840 1977 aa22.01■■□□□ 1.11
CCNC-213ENST00000523541 H7C1W4 665 aa22■■□□□ 1.11
CCNC-213ENST00000523541 LMOD1P29536 600 aaPredicted RBP22■■□□□ 1.11
CCNC-213ENST00000523541 CELF1Q92879 486 aaKnown RBP22■■□□□ 1.11
CCNC-213ENST00000523541 TAF1DQ9H5J8 278 aaPredicted RBP22■■□□□ 1.11
CCNC-213ENST00000523541 DDX60Q8IY21 1712 aaKnown RBP22■■□□□ 1.11
CCNC-213ENST00000523541 KIAA2012Q0VF49 1180 aa21.99■■□□□ 1.11
CCNC-213ENST00000523541 POTEIP0CG38 1075 aa21.98■■□□□ 1.11
CCNC-213ENST00000523541 POTEJP0CG39 1038 aa21.98■■□□□ 1.11
CCNC-213ENST00000523541 EPHX2P34913 555 aa21.98■■□□□ 1.11
CCNC-213ENST00000523541 GCKRQ14397 625 aa21.98■■□□□ 1.11
CCNC-213ENST00000523541 LDHDQ86WU2 507 aa21.98■■□□□ 1.11
CCNC-213ENST00000523541 SCN4AP35499 1836 aa21.98■■□□□ 1.11
CCNC-213ENST00000523541 CWF19L2Q2TBE0 894 aaKnown RBP21.97■■□□□ 1.11
CCNC-213ENST00000523541 PNMA8AQ86V59 439 aaPredicted RBP21.97■■□□□ 1.11
CCNC-213ENST00000523541 JARID2Q92833 1246 aaPredicted RBP21.97■■□□□ 1.11
CCNC-213ENST00000523541 PLA2G12BQ9BX93 195 aa21.97■■□□□ 1.11
CCNC-213ENST00000523541 ZNRF3Q9ULT6 936 aa21.97■■□□□ 1.11
CCNC-213ENST00000523541 CTSWP56202 376 aa21.96■■□□□ 1.11
CCNC-213ENST00000523541 SLFN5Q08AF3 891 aa21.96■■□□□ 1.11
CCNC-213ENST00000523541 PODXL2Q9NZ53 605 aa21.96■■□□□ 1.11
CCNC-213ENST00000523541 NSFL1CQ9UNZ2 370 aaKnown RBP21.96■■□□□ 1.11
CCNC-213ENST00000523541 TAF1P21675 1872 aa21.96■■□□□ 1.11
CCNC-213ENST00000523541 TTLL11Q8NHH1 800 aa21.95■■□□□ 1.1
CCNC-213ENST00000523541 CCDC85AQ96PX6 553 aaPredicted RBP21.95■■□□□ 1.1
CCNC-213ENST00000523541 CDC5LQ99459 802 aaKnown RBP21.95■■□□□ 1.1
CCNC-213ENST00000523541 EYA3Q99504 573 aa21.95■■□□□ 1.1
CCNC-213ENST00000523541 RTL9Q8NET4 1388 aa21.95■■□□□ 1.1
CCNC-213ENST00000523541 COL4A5P29400 1685 aa21.95■■□□□ 1.1
CCNC-213ENST00000523541 C6orf229H3BNL8 230 aa21.94■■□□□ 1.1
CCNC-213ENST00000523541 ANKRD18AQ8IVF6 992 aa21.94■■□□□ 1.1
CCNC-213ENST00000523541 DNAJC5GQ8N7S2 189 aa21.94■■□□□ 1.1
CCNC-213ENST00000523541 KLRG1Q96E93 195 aa21.94■■□□□ 1.1
CCNC-213ENST00000523541 SEC31BQ9NQW1 1179 aa21.94■■□□□ 1.1
CCNC-213ENST00000523541 TNIP1Q15025 636 aa21.93■■□□□ 1.1
CCNC-213ENST00000523541 WASHC4Q2M389 1173 aa21.93■■□□□ 1.1
CCNC-213ENST00000523541 CT47B1P0C2W7 299 aaPredicted RBP21.92■■□□□ 1.1
CCNC-213ENST00000523541 BEND3Q5T5X7 828 aa21.92■■□□□ 1.1
CCNC-213ENST00000523541 UBE3BQ7Z3V4 1068 aa21.92■■□□□ 1.1
CCNC-213ENST00000523541 TRMT2AQ8IZ69 625 aaKnown RBP21.92■■□□□ 1.1
CCNC-213ENST00000523541 RIMBP2O15034 1052 aa21.91■■□□□ 1.1
CCNC-213ENST00000523541 CSF1RP07333 972 aa21.91■■□□□ 1.1
CCNC-213ENST00000523541 CASP7P55210 303 aa21.91■■□□□ 1.1
CCNC-213ENST00000523541 GPSM2P81274 684 aa21.91■■□□□ 1.1
CCNC-213ENST00000523541 BSDC1Q9NW68 430 aaPredicted RBP21.91■■□□□ 1.1
CCNC-213ENST00000523541 G3V3G9 751 aa21.9■■□□□ 1.1
CCNC-213ENST00000523541 ALDH1L1O75891 902 aa21.9■■□□□ 1.1
CCNC-213ENST00000523541 CXCL9Q07325 125 aa21.9■■□□□ 1.1
CCNC-213ENST00000523541 DCAF8Q5TAQ9 597 aa21.9■■□□□ 1.1
CCNC-213ENST00000523541 CIAPIN1Q6FI81 312 aa21.9■■□□□ 1.1
CCNC-213ENST00000523541 TBC1D16Q8TBP0 767 aa21.9■■□□□ 1.1
CCNC-213ENST00000523541 BCL2L13Q9BXK5 485 aa21.9■■□□□ 1.1
CCNC-213ENST00000523541 ANKIB1Q9P2G1 1089 aa21.9■■□□□ 1.1
CCNC-213ENST00000523541 POLLQ9UGP5 575 aa21.9■■□□□ 1.1
CCNC-213ENST00000523541 LRRC37AA6NMS7 1700 aa21.89■■□□□ 1.1
CCNC-213ENST00000523541 RAD17O75943 681 aa21.89■■□□□ 1.09
CCNC-213ENST00000523541 ALDH1L2Q3SY69 923 aa21.89■■□□□ 1.09
CCNC-213ENST00000523541 DIEXFQ68CQ4 756 aaKnown RBP21.89■■□□□ 1.09
CCNC-213ENST00000523541 ZC3H12CQ9C0D7 883 aaKnown RBP21.89■■□□□ 1.09
CCNC-213ENST00000523541 PTPRCP08575 1304 aa21.88■■□□□ 1.09
CCNC-213ENST00000523541 F6X3S4 739 aa21.88■■□□□ 1.09
CCNC-213ENST00000523541 EPS15P42566 896 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms