RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 COL4A1P02462 1669 aa25.32■■□□□ 1.64
SMC4-222ENST00000490207 VAMP4O75379 141 aa25.32■■□□□ 1.64
SMC4-222ENST00000490207 ZNF521Q96K83 1311 aa25.32■■□□□ 1.64
SMC4-222ENST00000490207 POTECB2RU33 542 aa25.31■■□□□ 1.64
SMC4-222ENST00000490207 PCCAP05165 728 aaPredicted RBP25.31■■□□□ 1.64
SMC4-222ENST00000490207 HSP90B1P14625 803 aaKnown RBP25.31■■□□□ 1.64
SMC4-222ENST00000490207 NEXNQ0ZGT2 675 aa25.31■■□□□ 1.64
SMC4-222ENST00000490207 FSTL1Q12841 308 aa25.31■■□□□ 1.64
SMC4-222ENST00000490207 FLIIQ13045 1269 aa25.31■■□□□ 1.64
SMC4-222ENST00000490207 SP8Q8IXZ3 490 aa25.31■■□□□ 1.64
SMC4-222ENST00000490207 JDP2Q8WYK2 163 aa25.31■■□□□ 1.64
SMC4-222ENST00000490207 TMC4Q7Z404 712 aa25.3■■□□□ 1.64
SMC4-222ENST00000490207 DUOX1Q9NRD9 1551 aa25.3■■□□□ 1.64
SMC4-222ENST00000490207 FZD9O00144 591 aa25.29■■□□□ 1.64
SMC4-222ENST00000490207 IGKV5-2P06315 115 aa25.29■■□□□ 1.64
SMC4-222ENST00000490207 LARGE2Q8N3Y3 721 aa25.29■■□□□ 1.64
SMC4-222ENST00000490207 SMC1BQ8NDV3 1235 aa25.29■■□□□ 1.64
SMC4-222ENST00000490207 FKBP5Q13451 457 aaPredicted RBP25.28■■□□□ 1.64
SMC4-222ENST00000490207 DPP8Q6V1X1 898 aaPredicted RBP25.28■■□□□ 1.64
SMC4-222ENST00000490207 SUPT20HQ8NEM7 779 aa25.28■■□□□ 1.64
SMC4-222ENST00000490207 CELF1Q92879 486 aaKnown RBP25.28■■□□□ 1.64
SMC4-222ENST00000490207 CDHR2Q9BYE9 1310 aa25.28■■□□□ 1.64
SMC4-222ENST00000490207 CCER2I3L3R5 266 aa25.27■■□□□ 1.64
SMC4-222ENST00000490207 PPIP5K2O43314 1243 aa25.27■■□□□ 1.64
SMC4-222ENST00000490207 MPNDQ8N594 471 aa25.27■■□□□ 1.64
SMC4-222ENST00000490207 JARID2Q92833 1246 aaPredicted RBP25.27■■□□□ 1.64
SMC4-222ENST00000490207 L3MBTL3Q96JM7 780 aaPredicted RBP25.27■■□□□ 1.64
SMC4-222ENST00000490207 LTBP1Q14766 1721 aa25.26■■□□□ 1.63
SMC4-222ENST00000490207 PDE8AO60658 829 aa25.26■■□□□ 1.63
SMC4-222ENST00000490207 RTFDC1Q9BY42 306 aaPredicted RBP25.26■■□□□ 1.63
SMC4-222ENST00000490207 IQCA1LA6NCM1 817 aa25.25■■□□□ 1.63
SMC4-222ENST00000490207 NEURL1BA8MQ27 555 aa25.25■■□□□ 1.63
SMC4-222ENST00000490207 APLP1P51693 650 aa25.25■■□□□ 1.63
SMC4-222ENST00000490207 EIF6P56537 245 aaKnown RBP25.25■■□□□ 1.63
SMC4-222ENST00000490207 AOC3Q16853 763 aa25.25■■□□□ 1.63
SMC4-222ENST00000490207 CWF19L2Q2TBE0 894 aaKnown RBP25.25■■□□□ 1.63
SMC4-222ENST00000490207 NIM1KQ8IY84 436 aa25.25■■□□□ 1.63
SMC4-222ENST00000490207 SPEF2Q9C093 1822 aa25.25■■□□□ 1.63
SMC4-222ENST00000490207 CCDC152Q4G0S7 254 aa25.24■■□□□ 1.63
SMC4-222ENST00000490207 DNAAF4Q8WXU2 420 aa25.24■■□□□ 1.63
SMC4-222ENST00000490207 VPS33BQ9H267 617 aa25.24■■□□□ 1.63
SMC4-222ENST00000490207 CEP350Q5VT06 3117 aa25.23■■□□□ 1.63
SMC4-222ENST00000490207 GPC2Q8N158 579 aa25.23■■□□□ 1.63
SMC4-222ENST00000490207 SEC31BQ9NQW1 1179 aa25.22■■□□□ 1.63
SMC4-222ENST00000490207 CCDC85AQ96PX6 553 aaPredicted RBP25.21■■□□□ 1.63
SMC4-222ENST00000490207 GJA3Q9Y6H8 435 aa25.21■■□□□ 1.63
SMC4-222ENST00000490207 CTSWP56202 376 aa25.2■■□□□ 1.62
SMC4-222ENST00000490207 RPS8P62241 208 aaKnown RBP25.2■■□□□ 1.62
SMC4-222ENST00000490207 KIAA2012Q0VF49 1180 aa25.2■■□□□ 1.62
SMC4-222ENST00000490207 TAF1DQ9H5J8 278 aaPredicted RBP25.2■■□□□ 1.62
SMC4-222ENST00000490207 HACL1Q9UJ83 578 aa25.2■■□□□ 1.62
SMC4-222ENST00000490207 ADAMTSL1Q8N6G6 1762 aa25.2■■□□□ 1.62
SMC4-222ENST00000490207 E9PSI1 815 aa25.19■■□□□ 1.62
SMC4-222ENST00000490207 UBE3BQ7Z3V4 1068 aa25.19■■□□□ 1.62
SMC4-222ENST00000490207 GCKRQ14397 625 aa25.18■■□□□ 1.62
SMC4-222ENST00000490207 LINS1Q8NG48 757 aa25.18■■□□□ 1.62
SMC4-222ENST00000490207 NSFL1CQ9UNZ2 370 aaKnown RBP25.18■■□□□ 1.62
SMC4-222ENST00000490207 H7C1W4 665 aa25.17■■□□□ 1.62
SMC4-222ENST00000490207 POTEIP0CG38 1075 aa25.17■■□□□ 1.62
SMC4-222ENST00000490207 POTEJP0CG39 1038 aa25.17■■□□□ 1.62
SMC4-222ENST00000490207 GPSM2P81274 684 aa25.17■■□□□ 1.62
SMC4-222ENST00000490207 F6X3S4 739 aa25.16■■□□□ 1.62
SMC4-222ENST00000490207 EPHX2P34913 555 aa25.16■■□□□ 1.62
SMC4-222ENST00000490207 CHADLQ6NUI6 762 aa25.16■■□□□ 1.62
SMC4-222ENST00000490207 ZNRF3Q9ULT6 936 aa25.16■■□□□ 1.62
SMC4-222ENST00000490207 EAPPQ56P03 285 aaPredicted RBP25.15■■□□□ 1.62
SMC4-222ENST00000490207 LDHDQ86WU2 507 aa25.15■■□□□ 1.62
SMC4-222ENST00000490207 ANKRD18AQ8IVF6 992 aa25.15■■□□□ 1.62
SMC4-222ENST00000490207 RTL9Q8NET4 1388 aa25.15■■□□□ 1.62
SMC4-222ENST00000490207 C6orf229H3BNL8 230 aa25.14■■□□□ 1.62
SMC4-222ENST00000490207 LMOD1P29536 600 aaPredicted RBP25.14■■□□□ 1.62
SMC4-222ENST00000490207 SLFN5Q08AF3 891 aa25.14■■□□□ 1.62
SMC4-222ENST00000490207 TTLL11Q8NHH1 800 aa25.14■■□□□ 1.62
SMC4-222ENST00000490207 CDC5LQ99459 802 aaKnown RBP25.14■■□□□ 1.62
SMC4-222ENST00000490207 CASP7P55210 303 aa25.13■■□□□ 1.61
SMC4-222ENST00000490207 WASHC4Q2M389 1173 aa25.13■■□□□ 1.61
SMC4-222ENST00000490207 PLA2G12BQ9BX93 195 aa25.13■■□□□ 1.61
SMC4-222ENST00000490207 GREM2Q9H772 168 aa25.13■■□□□ 1.61
SMC4-222ENST00000490207 POLLQ9UGP5 575 aa25.13■■□□□ 1.61
SMC4-222ENST00000490207 SCNN1DP51172 638 aa25.12■■□□□ 1.61
SMC4-222ENST00000490207 CXCL9Q07325 125 aa25.12■■□□□ 1.61
SMC4-222ENST00000490207 BEND3Q5T5X7 828 aa25.12■■□□□ 1.61
SMC4-222ENST00000490207 EYA3Q99504 573 aa25.12■■□□□ 1.61
SMC4-222ENST00000490207 PODXL2Q9NZ53 605 aa25.12■■□□□ 1.61
SMC4-222ENST00000490207 HTRA3P83110 453 aa25.11■■□□□ 1.61
SMC4-222ENST00000490207 PNMA8AQ86V59 439 aaPredicted RBP25.11■■□□□ 1.61
SMC4-222ENST00000490207 TBC1D16Q8TBP0 767 aa25.11■■□□□ 1.61
SMC4-222ENST00000490207 ANKIB1Q9P2G1 1089 aa25.11■■□□□ 1.61
SMC4-222ENST00000490207 RIMBP2O15034 1052 aa25.1■■□□□ 1.61
SMC4-222ENST00000490207 UFL1O94874 794 aa25.1■■□□□ 1.61
SMC4-222ENST00000490207 CIAPIN1Q6FI81 312 aa25.1■■□□□ 1.61
SMC4-222ENST00000490207 CDCA7LQ96GN5 454 aa25.1■■□□□ 1.61
SMC4-222ENST00000490207 GPR101Q96P66 508 aaPredicted RBP25.1■■□□□ 1.61
SMC4-222ENST00000490207 GGA1Q9UJY5 639 aa25.1■■□□□ 1.61
SMC4-222ENST00000490207 YDJCA8MPS7 323 aa25.09■■□□□ 1.61
SMC4-222ENST00000490207 DBNDD1Q9H9R9 158 aa25.09■■□□□ 1.61
SMC4-222ENST00000490207 CLEC11AQ9Y240 323 aa25.09■■□□□ 1.61
SMC4-222ENST00000490207 XDHP47989 1333 aa25.09■■□□□ 1.61
SMC4-222ENST00000490207 RAD17O75943 681 aa25.08■■□□□ 1.61
SMC4-222ENST00000490207 EPS15P42566 896 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms