RNA–Protein interactions for RNA: ENST00000481347.1

TPR-206, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 2,727 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-206ENST00000481347 KIF1BPQ96EK5 621 aa12.71□□□□□ -0.37
TPR-206ENST00000481347 DBF4Q9UBU7 674 aaPredicted RBP12.71□□□□□ -0.37
TPR-206ENST00000481347 PHRF1Q9P1Y6 1649 aaKnown RBP12.71□□□□□ -0.37
TPR-206ENST00000481347 SPDYE2BA6NHP3 402 aa12.71□□□□□ -0.38
TPR-206ENST00000481347 SPDYE6P0CI01 402 aa12.71□□□□□ -0.38
TPR-206ENST00000481347 SPDYE2Q495Y8 402 aa12.71□□□□□ -0.38
TPR-206ENST00000481347 MYRIPQ8NFW9 859 aa12.71□□□□□ -0.38
TPR-206ENST00000481347 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.71□□□□□ -0.38
TPR-206ENST00000481347 KRT28Q7Z3Y7 464 aa12.7□□□□□ -0.38
TPR-206ENST00000481347 DDX27Q96GQ7 796 aaKnown RBP12.7□□□□□ -0.38
TPR-206ENST00000481347 TMX3Q96JJ7 454 aa12.7□□□□□ -0.38
TPR-206ENST00000481347 AXIN2Q9Y2T1 843 aa12.7□□□□□ -0.38
TPR-206ENST00000481347 PRAMEF22A3QJZ6 481 aa12.7□□□□□ -0.38
TPR-206ENST00000481347 NASPP49321 788 aaPredicted RBP12.7□□□□□ -0.38
TPR-206ENST00000481347 MNX1P50219 401 aaPredicted RBP12.7□□□□□ -0.38
TPR-206ENST00000481347 PROSER3Q2NL68 480 aa12.7□□□□□ -0.38
TPR-206ENST00000481347 TRERF1Q96PN7 1200 aa12.7□□□□□ -0.38
TPR-206ENST00000481347 MAP3K2Q9Y2U5 619 aa12.7□□□□□ -0.38
TPR-206ENST00000481347 SLIT3O75094 1523 aa12.7□□□□□ -0.38
TPR-206ENST00000481347 NCAPD2Q15021 1401 aa12.7□□□□□ -0.38
TPR-206ENST00000481347 BRD1O95696 1058 aa12.69□□□□□ -0.38
TPR-206ENST00000481347 SEMA3FQ13275 785 aa12.69□□□□□ -0.38
TPR-206ENST00000481347 KLHL40Q2TBA0 621 aa12.69□□□□□ -0.38
TPR-206ENST00000481347 IL25Q9H293 177 aa12.69□□□□□ -0.38
TPR-206ENST00000481347 GOPCQ9HD26 462 aa12.69□□□□□ -0.38
TPR-206ENST00000481347 C9orf78Q9NZ63 289 aaPredicted RBP12.69□□□□□ -0.38
TPR-206ENST00000481347 GIGYF1O75420 1035 aaPredicted RBP12.69□□□□□ -0.38
TPR-206ENST00000481347 ANAPC15P60006 121 aa12.69□□□□□ -0.38
TPR-206ENST00000481347 HS1BP3Q53T59 392 aa12.69□□□□□ -0.38
TPR-206ENST00000481347 PI4K2BQ8TCG2 481 aa12.69□□□□□ -0.38
TPR-206ENST00000481347 MCM2P49736 904 aa12.68□□□□□ -0.38
TPR-206ENST00000481347 ZC3H6P61129 1189 aaKnown RBP12.68□□□□□ -0.38
TPR-206ENST00000481347 HSP90AB4PQ58FF6 505 aa12.68□□□□□ -0.38
TPR-206ENST00000481347 UPF3BQ9BZI7 483 aaKnown RBP12.68□□□□□ -0.38
TPR-206ENST00000481347 ZDHHC9Q9Y397 364 aa12.68□□□□□ -0.38
TPR-206ENST00000481347 ZNF662Q6ZS27 426 aa12.68□□□□□ -0.38
TPR-206ENST00000481347 CEP120Q8N960 986 aa12.68□□□□□ -0.38
TPR-206ENST00000481347 FEZ2Q9UHY8 353 aaPredicted RBP12.68□□□□□ -0.38
TPR-206ENST00000481347 CEP83Q9Y592 693 aa12.68□□□□□ -0.38
TPR-206ENST00000481347 SLFN14P0C7P3 912 aa12.68□□□□□ -0.38
TPR-206ENST00000481347 U2AF2P26368 475 aaKnown RBP eCLIP12.68□□□□□ -0.38
TPR-206ENST00000481347 FBXO22Q8NEZ5 403 aa12.68□□□□□ -0.38
TPR-206ENST00000481347 MYCBPQ99417 103 aaPredicted RBP12.68□□□□□ -0.38
TPR-206ENST00000481347 LMBRD1Q9NUN5 540 aa12.68□□□□□ -0.38
TPR-206ENST00000481347 CWF19L2Q2TBE0 894 aaKnown RBP12.67□□□□□ -0.38
TPR-206ENST00000481347 NBPF20Q3BBV1 942 aa12.67□□□□□ -0.38
TPR-206ENST00000481347 KSR2Q6VAB6 950 aa12.67□□□□□ -0.38
TPR-206ENST00000481347 CNTROBQ8N137 903 aa12.67□□□□□ -0.38
TPR-206ENST00000481347 PDCL2Q8N4E4 241 aa12.67□□□□□ -0.38
TPR-206ENST00000481347 CALCOCO1Q9P1Z2 691 aa12.67□□□□□ -0.38
TPR-206ENST00000481347 ADAMTSL3P82987 1691 aa12.67□□□□□ -0.38
TPR-206ENST00000481347 FAM177BA6PVY3 158 aa12.67□□□□□ -0.38
TPR-206ENST00000481347 ALDH1L1O75891 902 aa12.67□□□□□ -0.38
TPR-206ENST00000481347 GTF2A1P52655 376 aaPredicted RBP12.67□□□□□ -0.38
TPR-206ENST00000481347 AIMP1Q12904 312 aaKnown RBP12.67□□□□□ -0.38
TPR-206ENST00000481347 MAP2K5Q13163 448 aa12.67□□□□□ -0.38
TPR-206ENST00000481347 HSP90AB3PQ58FF7 597 aa12.67□□□□□ -0.38
TPR-206ENST00000481347 CHAMP1Q96JM3 812 aa12.67□□□□□ -0.38
TPR-206ENST00000481347 OVOS2A0A0G2JMS6 1433 aa12.66□□□□□ -0.38
TPR-206ENST00000481347 PRPF40AO75400 957 aaKnown RBP12.66□□□□□ -0.38
TPR-206ENST00000481347 CAVIN1Q6NZI2 390 aaKnown RBP12.66□□□□□ -0.38
TPR-206ENST00000481347 GABPB1Q06547 395 aaPredicted RBP12.66□□□□□ -0.38
TPR-206ENST00000481347 RNF217Q8TC41 542 aa12.66□□□□□ -0.38
TPR-206ENST00000481347 PA2G4Q9UQ80 394 aaKnown RBP12.66□□□□□ -0.38
TPR-206ENST00000481347 SGSM2O43147 1006 aa12.65□□□□□ -0.38
TPR-206ENST00000481347 HSPA4P34932 840 aa12.65□□□□□ -0.38
TPR-206ENST00000481347 CUL4AQ13619 759 aa12.65□□□□□ -0.38
TPR-206ENST00000481347 NLRP7Q8WX94 980 aa12.65□□□□□ -0.38
TPR-206ENST00000481347 NLRP2Q9NX02 1062 aa12.65□□□□□ -0.38
TPR-206ENST00000481347 HYPKQ9NX55 129 aa12.65□□□□□ -0.38
TPR-206ENST00000481347 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.65□□□□□ -0.382e-10■■■■□ 20
TPR-206ENST00000481347 TRPM3Q9HCF6 1732 aaPredicted RBP12.65□□□□□ -0.38
TPR-206ENST00000481347 GOLIM4O00461 696 aa12.65□□□□□ -0.38
TPR-206ENST00000481347 ERBB3P21860 1342 aa12.65□□□□□ -0.38
TPR-206ENST00000481347 C1orf167Q5SNV9 1468 aa12.65□□□□□ -0.38
TPR-206ENST00000481347 CLASRPQ8N2M8 674 aaKnown RBP12.65□□□□□ -0.38
TPR-206ENST00000481347 EFCAB3Q8N7B9 438 aa12.65□□□□□ -0.38
TPR-206ENST00000481347 NCAPGQ9BPX3 1015 aa12.65□□□□□ -0.38
TPR-206ENST00000481347 HEG1Q9ULI3 1381 aa12.65□□□□□ -0.38
TPR-206ENST00000481347 ZKSCAN5Q9Y2L8 839 aa12.65□□□□□ -0.38
TPR-206ENST00000481347 SATB1Q01826 763 aa12.64□□□□□ -0.39
TPR-206ENST00000481347 SLC39A6Q13433 755 aa12.64□□□□□ -0.39
TPR-206ENST00000481347 MTX1Q13505 466 aa12.64□□□□□ -0.39
TPR-206ENST00000481347 CWC27Q6UX04 472 aaKnown RBP12.64□□□□□ -0.39
TPR-206ENST00000481347 RAPGEF4Q8WZA2 1011 aa12.64□□□□□ -0.39
TPR-206ENST00000481347 RGPD5Q99666 1765 aa12.64□□□□□ -0.39
TPR-206ENST00000481347 RAD50Q92878 1312 aa12.64□□□□□ -0.39
TPR-206ENST00000481347 GLRX3O76003 335 aaKnown RBP12.64□□□□□ -0.39
TPR-206ENST00000481347 CCDC172P0C7W6 258 aa12.64□□□□□ -0.39
TPR-206ENST00000481347 TTC41PQ6P2S7 1318 aa12.63□□□□□ -0.39
TPR-206ENST00000481347 DDX58O95786 925 aaKnown RBP12.63□□□□□ -0.39
TPR-206ENST00000481347 NOM1Q5C9Z4 860 aaKnown RBP12.63□□□□□ -0.39
TPR-206ENST00000481347 ADAMTS19Q8TE59 1207 aa12.63□□□□□ -0.39
TPR-206ENST00000481347 SUCLG2Q96I99 432 aa12.63□□□□□ -0.39
TPR-206ENST00000481347 TMX1Q9H3N1 280 aa12.63□□□□□ -0.39
TPR-206ENST00000481347 DDX21Q9NR30 783 aaKnown RBP eCLIP12.63□□□□□ -0.39
TPR-206ENST00000481347 RSPH14Q9UHP6 348 aa12.63□□□□□ -0.39
TPR-206ENST00000481347 CAMTA1Q9Y6Y1 1673 aa12.63□□□□□ -0.39
TPR-206ENST00000481347 EPB41L2O43491 1005 aaKnown RBP12.63□□□□□ -0.39
TPR-206ENST00000481347 IFIT2P09913 472 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms