RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 GOLIM4O00461 696 aa11.55□□□□□ -0.56
CMC1-209ENST00000477739 SKIDA1Q1XH10 827 aa11.55□□□□□ -0.56
CMC1-209ENST00000477739 TAF7LQ5H9L4 462 aa11.55□□□□□ -0.56
CMC1-209ENST00000477739 PDCL2Q8N4E4 241 aa11.55□□□□□ -0.56
CMC1-209ENST00000477739 PEAK1Q9H792 1746 aa11.55□□□□□ -0.56
CMC1-209ENST00000477739 RIOK3O14730 519 aaKnown RBP11.55□□□□□ -0.56
CMC1-209ENST00000477739 CYP2E1P05181 493 aaPredicted RBP11.55□□□□□ -0.56
CMC1-209ENST00000477739 CREB3L3Q68CJ9 461 aa11.55□□□□□ -0.56
CMC1-209ENST00000477739 TTC6Q86TZ1 520 aa11.55□□□□□ -0.56
CMC1-209ENST00000477739 ZBTB3Q9H5J0 574 aa11.55□□□□□ -0.56
CMC1-209ENST00000477739 RIMS1Q86UR5 1692 aaKnown RBP11.55□□□□□ -0.56
CMC1-209ENST00000477739 AKAP12Q02952 1782 aa11.55□□□□□ -0.56
CMC1-209ENST00000477739 ZNF165P49910 485 aa11.55□□□□□ -0.56
CMC1-209ENST00000477739 KSR2Q6VAB6 950 aa11.55□□□□□ -0.56
CMC1-209ENST00000477739 EAF2Q96CJ1 260 aaPredicted RBP11.55□□□□□ -0.56
CMC1-209ENST00000477739 USP16Q9Y5T5 823 aa11.55□□□□□ -0.56
CMC1-209ENST00000477739 KNDC1Q76NI1 1749 aa11.54□□□□□ -0.56
CMC1-209ENST00000477739 HSPA4P34932 840 aa11.54□□□□□ -0.56
CMC1-209ENST00000477739 TIMM10P62072 90 aa11.54□□□□□ -0.56
CMC1-209ENST00000477739 COPS6Q7L5N1 327 aa11.54□□□□□ -0.56
CMC1-209ENST00000477739 ZNF589Q86UQ0 364 aaPredicted RBP11.54□□□□□ -0.56
CMC1-209ENST00000477739 SUCLG2Q96I99 432 aa11.54□□□□□ -0.56
CMC1-209ENST00000477739 GJB4Q9NTQ9 266 aa11.54□□□□□ -0.56
CMC1-209ENST00000477739 NCOA3Q9Y6Q9 1424 aa11.54□□□□□ -0.56
CMC1-209ENST00000477739 ARHGEF25Q86VW2 580 aa11.54□□□□□ -0.56
CMC1-209ENST00000477739 HOMER1Q86YM7 354 aa11.54□□□□□ -0.56
CMC1-209ENST00000477739 NFATC2IPQ8NCF5 419 aa11.54□□□□□ -0.56
CMC1-209ENST00000477739 AXIN2Q9Y2T1 843 aa11.54□□□□□ -0.56
CMC1-209ENST00000477739 GIGYF1O75420 1035 aaPredicted RBP11.53□□□□□ -0.56
CMC1-209ENST00000477739 TYRO3Q06418 890 aa11.53□□□□□ -0.56
CMC1-209ENST00000477739 XAGE3Q8WTP9 111 aa11.53□□□□□ -0.56
CMC1-209ENST00000477739 HYPKQ9NX55 129 aa11.53□□□□□ -0.56
CMC1-209ENST00000477739 TNNT1P13805 278 aa11.53□□□□□ -0.56
CMC1-209ENST00000477739 APOBRQ0VD83 1088 aa11.53□□□□□ -0.56
CMC1-209ENST00000477739 RNF20Q5VTR2 975 aa11.53□□□□□ -0.56
CMC1-209ENST00000477739 ZNF594Q96JF6 807 aaPredicted RBP11.53□□□□□ -0.56
CMC1-209ENST00000477739 CLIP2Q9UDT6 1046 aa11.53□□□□□ -0.56
CMC1-209ENST00000477739 MTMR7Q9Y216 660 aa11.53□□□□□ -0.56
CMC1-209ENST00000477739 KIF13AQ9H1H9 1805 aa11.53□□□□□ -0.56
CMC1-209ENST00000477739 NR1I2O75469 434 aa11.53□□□□□ -0.56
CMC1-209ENST00000477739 HOXB7P09629 217 aa11.53□□□□□ -0.56
CMC1-209ENST00000477739 PIBF1Q8WXW3 757 aa11.53□□□□□ -0.56
CMC1-209ENST00000477739 ERC1Q8IUD2 1116 aa11.52□□□□□ -0.56
CMC1-209ENST00000477739 STAP2Q9UGK3 403 aa11.52□□□□□ -0.56
CMC1-209ENST00000477739 RAD50Q92878 1312 aa11.52□□□□□ -0.56
CMC1-209ENST00000477739 GRM8O00222 908 aa11.52□□□□□ -0.57
CMC1-209ENST00000477739 Q6ZUG5 572 aa11.52□□□□□ -0.57
CMC1-209ENST00000477739 ARHGAP23Q9P227 1491 aa11.52□□□□□ -0.57
CMC1-209ENST00000477739 MTMR6Q9Y217 621 aa11.52□□□□□ -0.57
CMC1-209ENST00000477739 AP5Z1O43299 807 aa11.52□□□□□ -0.57
CMC1-209ENST00000477739 ANAPC15P60006 121 aa11.52□□□□□ -0.57
CMC1-209ENST00000477739 GPHNQ9NQX3 736 aaPredicted RBP11.52□□□□□ -0.57
CMC1-209ENST00000477739 NRKQ7Z2Y5 1582 aa11.52□□□□□ -0.57
CMC1-209ENST00000477739 RRP12Q5JTH9 1297 aaKnown RBP11.51□□□□□ -0.57
CMC1-209ENST00000477739 CCDC73Q6ZRK6 1079 aa11.51□□□□□ -0.57
CMC1-209ENST00000477739 LSG1Q9H089 658 aaKnown RBP11.51□□□□□ -0.57
CMC1-209ENST00000477739 BCL2L12Q9HB09 334 aa11.51□□□□□ -0.57
CMC1-209ENST00000477739 SLIT1O75093 1534 aa11.51□□□□□ -0.57
CMC1-209ENST00000477739 A0A087WZG4 1122 aa11.51□□□□□ -0.57
CMC1-209ENST00000477739 A0A0G2JLW4 131 aa11.51□□□□□ -0.57
CMC1-209ENST00000477739 CPLX1O14810 134 aa11.51□□□□□ -0.57
CMC1-209ENST00000477739 TFCP2Q12800 502 aa11.51□□□□□ -0.57
CMC1-209ENST00000477739 PI4K2BQ8TCG2 481 aa11.51□□□□□ -0.57
CMC1-209ENST00000477739 PDILTQ8N807 584 aa11.51□□□□□ -0.57
CMC1-209ENST00000477739 LINS1Q8NG48 757 aa11.51□□□□□ -0.57
CMC1-209ENST00000477739 DBNDD2Q9BQY9 259 aa11.51□□□□□ -0.57
CMC1-209ENST00000477739 KINO60870 393 aaKnown RBP11.5□□□□□ -0.57
CMC1-209ENST00000477739 ALDH1L1O75891 902 aa11.5□□□□□ -0.57
CMC1-209ENST00000477739 MARCKSP29966 332 aaPredicted RBP11.5□□□□□ -0.57
CMC1-209ENST00000477739 CABP4P57796 275 aa11.5□□□□□ -0.57
CMC1-209ENST00000477739 SLC4A8Q2Y0W8 1093 aa11.5□□□□□ -0.57
CMC1-209ENST00000477739 ZNF790Q6PG37 636 aa11.5□□□□□ -0.57
CMC1-209ENST00000477739 C19orf44Q9H6X5 657 aa11.5□□□□□ -0.57
CMC1-209ENST00000477739 ZSWIM4Q9H7M6 989 aa11.5□□□□□ -0.57
CMC1-209ENST00000477739 CCDC171Q6TFL3 1326 aa11.5□□□□□ -0.57
CMC1-209ENST00000477739 A0A1B0GVL5 298 aa11.5□□□□□ -0.57
CMC1-209ENST00000477739 SLC27A2O14975 620 aa11.5□□□□□ -0.57
CMC1-209ENST00000477739 GOLGA8FQ08AF8 430 aa11.5□□□□□ -0.57
CMC1-209ENST00000477739 GOLGA8DPQ0D2H9 430 aa11.5□□□□□ -0.57
CMC1-209ENST00000477739 POLA2Q14181 598 aa11.5□□□□□ -0.57
CMC1-209ENST00000477739 CBX8Q9HC52 389 aa11.5□□□□□ -0.57
CMC1-209ENST00000477739 DDX21Q9NR30 783 aaKnown RBP eCLIP11.5□□□□□ -0.57
CMC1-209ENST00000477739 STRN4Q9NRL3 753 aa11.5□□□□□ -0.57
CMC1-209ENST00000477739 HSPA2P54652 639 aa11.49□□□□□ -0.57
CMC1-209ENST00000477739 DYNC1I1O14576 645 aa11.49□□□□□ -0.57
CMC1-209ENST00000477739 PSMA5P28066 241 aa11.49□□□□□ -0.57
CMC1-209ENST00000477739 CCDC112Q8NEF3 446 aa11.49□□□□□ -0.57
CMC1-209ENST00000477739 RGPD8O14715 1765 aaPredicted RBP11.49□□□□□ -0.57
CMC1-209ENST00000477739 ZNF500O60304 480 aaPredicted RBP11.48□□□□□ -0.57
CMC1-209ENST00000477739 GPTP24298 496 aa11.48□□□□□ -0.57
CMC1-209ENST00000477739 SPECC1Q5M775 1068 aa11.48□□□□□ -0.57
CMC1-209ENST00000477739 VPS53Q5VIR6 699 aa11.48□□□□□ -0.57
CMC1-209ENST00000477739 CCAR1Q8IX12 1150 aaKnown RBP11.48□□□□□ -0.57
CMC1-209ENST00000477739 IFNL2Q8IZJ0 200 aa11.48□□□□□ -0.57
CMC1-209ENST00000477739 FSIP1Q8NA03 581 aa11.48□□□□□ -0.57
CMC1-209ENST00000477739 CGNQ9P2M7 1197 aaKnown RBP11.48□□□□□ -0.57
CMC1-209ENST00000477739 CUL4AQ13619 759 aa11.48□□□□□ -0.57
CMC1-209ENST00000477739 STK38Q15208 465 aa11.48□□□□□ -0.57
CMC1-209ENST00000477739 ATP2B3Q16720 1220 aa11.48□□□□□ -0.57
CMC1-209ENST00000477739 EPHA10Q5JZY3 1008 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms