RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 PTMAP06454 111 aaKnown RBP4.57□□□□□ -1.68
HMGB3P8-201ENST00000449709 MZF1P28698 734 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P8-201ENST00000449709 HIRAP54198 1017 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P8-201ENST00000449709 PSMD2Q13200 908 aa4.57□□□□□ -1.68
HMGB3P8-201ENST00000449709 TEAD4Q15561 434 aa4.57□□□□□ -1.68
HMGB3P8-201ENST00000449709 Q6ZVU0 165 aa4.57□□□□□ -1.68
HMGB3P8-201ENST00000449709 ATCAYQ86WG3 371 aa4.57□□□□□ -1.68
HMGB3P8-201ENST00000449709 GPR161Q8N6U8 529 aaKnown RBP4.57□□□□□ -1.68
HMGB3P8-201ENST00000449709 TRIM44Q96DX7 344 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P8-201ENST00000449709 AGBL1Q96MI9 1066 aa4.57□□□□□ -1.68
HMGB3P8-201ENST00000449709 ARHGEF10LQ9HCE6 1279 aa4.57□□□□□ -1.68
HMGB3P8-201ENST00000449709 PGPEP1Q9NXJ5 209 aa4.57□□□□□ -1.68
HMGB3P8-201ENST00000449709 PPP1R1BQ9UD71 204 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P8-201ENST00000449709 LAS1LQ9Y4W2 734 aaKnown RBP4.57□□□□□ -1.68
HMGB3P8-201ENST00000449709 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P8-201ENST00000449709 PRDM2Q13029 1718 aa4.56□□□□□ -1.68
HMGB3P8-201ENST00000449709 SERTM1A2A2V5 107 aa4.56□□□□□ -1.68
HMGB3P8-201ENST00000449709 EML1O00423 815 aa4.56□□□□□ -1.68
HMGB3P8-201ENST00000449709 SPINT1O43278 529 aa4.56□□□□□ -1.68
HMGB3P8-201ENST00000449709 XRCC6P12956 609 aaKnown RBP eCLIP4.56□□□□□ -1.68
HMGB3P8-201ENST00000449709 KRT76Q01546 638 aa4.56□□□□□ -1.68
HMGB3P8-201ENST00000449709 ATP2B2Q01814 1243 aa4.56□□□□□ -1.68
HMGB3P8-201ENST00000449709 PTSQ03393 145 aa4.56□□□□□ -1.68
HMGB3P8-201ENST00000449709 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.56□□□□□ -1.68
HMGB3P8-201ENST00000449709 C11orf91Q3C1V1 193 aa4.56□□□□□ -1.68
HMGB3P8-201ENST00000449709 SH3PXD2AQ5TCZ1 1133 aa4.56□□□□□ -1.68
HMGB3P8-201ENST00000449709 ALG1LQ6GMV1 187 aa4.56□□□□□ -1.68
HMGB3P8-201ENST00000449709 ETFBKMTQ8IXQ9 262 aa4.56□□□□□ -1.68
HMGB3P8-201ENST00000449709 ZNF295-AS1Q8N0V1 137 aa4.56□□□□□ -1.68
HMGB3P8-201ENST00000449709 SLC43A3Q8NBI5 491 aa4.56□□□□□ -1.68
HMGB3P8-201ENST00000449709 RNF34Q969K3 372 aa4.56□□□□□ -1.68
HMGB3P8-201ENST00000449709 TINF2Q9BSI4 451 aa4.56□□□□□ -1.68
HMGB3P8-201ENST00000449709 CCDC94Q9BW85 323 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P8-201ENST00000449709 CARD10Q9BWT7 1032 aa4.56□□□□□ -1.68
HMGB3P8-201ENST00000449709 CFHR5Q9BXR6 569 aa4.56□□□□□ -1.68
HMGB3P8-201ENST00000449709 TGIF2Q9GZN2 237 aa4.56□□□□□ -1.68
HMGB3P8-201ENST00000449709 RAB6BQ9NRW1 208 aa4.56□□□□□ -1.68
HMGB3P8-201ENST00000449709 CHMP3Q9Y3E7 222 aa4.56□□□□□ -1.68
HMGB3P8-201ENST00000449709 IBTKQ9P2D0 1353 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P8-201ENST00000449709 RAD50Q92878 1312 aa4.55□□□□□ -1.68
HMGB3P8-201ENST00000449709 KIF21BO75037 1637 aa4.55□□□□□ -1.68
HMGB3P8-201ENST00000449709 PNMA6FA0A0J9YX94 578 aa4.55□□□□□ -1.68
HMGB3P8-201ENST00000449709 TULP2O00295 520 aa4.55□□□□□ -1.68
HMGB3P8-201ENST00000449709 DYNC1I1O14576 645 aa4.55□□□□□ -1.68
HMGB3P8-201ENST00000449709 PDGFAP04085 211 aa4.55□□□□□ -1.68
HMGB3P8-201ENST00000449709 NOS2P35228 1153 aa4.55□□□□□ -1.68
HMGB3P8-201ENST00000449709 USP5P45974 858 aa4.55□□□□□ -1.68
HMGB3P8-201ENST00000449709 RELBQ01201 579 aa4.55□□□□□ -1.68
HMGB3P8-201ENST00000449709 TLR1Q15399 786 aa4.55□□□□□ -1.68
HMGB3P8-201ENST00000449709 RTN1Q16799 776 aa4.55□□□□□ -1.68
HMGB3P8-201ENST00000449709 ALDH16A1Q8IZ83 802 aa4.55□□□□□ -1.68
HMGB3P8-201ENST00000449709 KDF1Q8NAX2 398 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P8-201ENST00000449709 ZDHHC1Q8WTX9 485 aa4.55□□□□□ -1.68
HMGB3P8-201ENST00000449709 CNKSR1Q969H4 720 aa4.55□□□□□ -1.68
HMGB3P8-201ENST00000449709 SPATA32Q96LK8 384 aa4.55□□□□□ -1.68
HMGB3P8-201ENST00000449709 ESYT1Q9BSJ8 1104 aa4.55□□□□□ -1.68
HMGB3P8-201ENST00000449709 VTI1BQ9UEU0 232 aa4.55□□□□□ -1.68
HMGB3P8-201ENST00000449709 ZHX1Q9UKY1 873 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P8-201ENST00000449709 HDAC5Q9UQL6 1122 aa4.55□□□□□ -1.68
HMGB3P8-201ENST00000449709 MYOM3Q5VTT5 1437 aa4.55□□□□□ -1.68
HMGB3P8-201ENST00000449709 CADPSQ9ULU8 1353 aa4.54□□□□□ -1.68
HMGB3P8-201ENST00000449709 SMARCA5O60264 1052 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P8-201ENST00000449709 GNA15P30679 374 aa4.54□□□□□ -1.68
HMGB3P8-201ENST00000449709 ZNF76P36508 570 aa4.54□□□□□ -1.68
HMGB3P8-201ENST00000449709 CTSOP43234 321 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P8-201ENST00000449709 ZAP70P43403 619 aa4.54□□□□□ -1.68
HMGB3P8-201ENST00000449709 FAM193AP78312 1265 aa4.54□□□□□ -1.68
HMGB3P8-201ENST00000449709 SETQ01105 290 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P8-201ENST00000449709 DNM1Q05193 864 aaKnown RBP4.54□□□□□ -1.68
HMGB3P8-201ENST00000449709 DGKZQ13574 1117 aa4.54□□□□□ -1.68
HMGB3P8-201ENST00000449709 NBPF15Q8N660 670 aa4.54□□□□□ -1.68
HMGB3P8-201ENST00000449709 CCDC155Q8N6L0 562 aa4.54□□□□□ -1.68
HMGB3P8-201ENST00000449709 EDEM1Q92611 657 aa4.54□□□□□ -1.68
HMGB3P8-201ENST00000449709 IFT43Q96FT9 208 aa4.54□□□□□ -1.68
HMGB3P8-201ENST00000449709 NGLY1Q96IV0 654 aa4.54□□□□□ -1.68
HMGB3P8-201ENST00000449709 FRMD6Q96NE9 622 aa4.54□□□□□ -1.68
HMGB3P8-201ENST00000449709 CNTNAP3BQ96NU0 1288 aa4.54□□□□□ -1.68
HMGB3P8-201ENST00000449709 CSRNP1Q96S65 589 aa4.54□□□□□ -1.68
HMGB3P8-201ENST00000449709 INSM2Q96T92 566 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P8-201ENST00000449709 DNAJC2Q99543 621 aaKnown RBP4.54□□□□□ -1.68
HMGB3P8-201ENST00000449709 CNTNAP3Q9BZ76 1288 aa4.54□□□□□ -1.68
HMGB3P8-201ENST00000449709 FHDC1Q9C0D6 1143 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P8-201ENST00000449709 ZNF395Q9H8N7 513 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P8-201ENST00000449709 HCN4Q9Y3Q4 1203 aa4.54□□□□□ -1.68
HMGB3P8-201ENST00000449709 RSF1Q96T23 1441 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P8-201ENST00000449709 UNC13AQ9UPW8 1703 aa4.53□□□□□ -1.68
HMGB3P8-201ENST00000449709 FRAT2O75474 233 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P8-201ENST00000449709 ADH1AP07327 375 aa4.53□□□□□ -1.68
HMGB3P8-201ENST00000449709 CTSHP09668 335 aa4.53□□□□□ -1.68
HMGB3P8-201ENST00000449709 PTMSP20962 102 aa4.53□□□□□ -1.68
HMGB3P8-201ENST00000449709 CLN3Q13286 438 aa4.53□□□□□ -1.68
HMGB3P8-201ENST00000449709 RALBP1Q15311 655 aa4.53□□□□□ -1.68
HMGB3P8-201ENST00000449709 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P8-201ENST00000449709 KIAA1211Q6ZU35 1233 aa4.53□□□□□ -1.68
HMGB3P8-201ENST00000449709 FBF1Q8TES7 1133 aa4.53□□□□□ -1.68
HMGB3P8-201ENST00000449709 L3MBTL2Q969R5 705 aa4.53□□□□□ -1.68
HMGB3P8-201ENST00000449709 COL25A1Q9BXS0 654 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P8-201ENST00000449709 TANGO6Q9C0B7 1094 aa4.53□□□□□ -1.68
HMGB3P8-201ENST00000449709 CCSER2Q9H7U1 834 aa4.53□□□□□ -1.68
HMGB3P8-201ENST00000449709 CABP1Q9NZU7 370 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms