RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 GRAPLQ8TC17 118 aaPredicted RBP16.37■□□□□ 0.21
GPC1-204ENST00000426280 CWC25Q9NXE8 425 aaPredicted RBP16.37■□□□□ 0.21
GPC1-204ENST00000426280 F6X3S4 739 aa16.36■□□□□ 0.21
GPC1-204ENST00000426280 FZD9O00144 591 aa16.36■□□□□ 0.21
GPC1-204ENST00000426280 BBOX1O75936 387 aa16.36■□□□□ 0.21
GPC1-204ENST00000426280 DDX58O95786 925 aaKnown RBP16.36■□□□□ 0.21
GPC1-204ENST00000426280 VEGFAP15692 232 aaPredicted RBP16.36■□□□□ 0.21
GPC1-204ENST00000426280 CC2D2BQ6DHV5 1058 aa16.36■□□□□ 0.21
GPC1-204ENST00000426280 DPY19L2Q6NUT2 758 aa16.36■□□□□ 0.21
GPC1-204ENST00000426280 NEURL1BA8MQ27 555 aa16.35■□□□□ 0.21
GPC1-204ENST00000426280 HSPA6P17066 643 aa16.35■□□□□ 0.21
GPC1-204ENST00000426280 HTRA3P83110 453 aa16.35■□□□□ 0.21
GPC1-204ENST00000426280 RBM46Q8TBY0 533 aaKnown RBP16.35■□□□□ 0.21
GPC1-204ENST00000426280 WDR90Q96KV7 1748 aa16.35■□□□□ 0.21
GPC1-204ENST00000426280 H7C1W4 665 aa16.34■□□□□ 0.21
GPC1-204ENST00000426280 AOC3Q16853 763 aa16.34■□□□□ 0.21
GPC1-204ENST00000426280 RTFDC1Q9BY42 306 aaPredicted RBP16.34■□□□□ 0.21
GPC1-204ENST00000426280 MYH16Q9H6N6 1097 aa16.34■□□□□ 0.21
GPC1-204ENST00000426280 WTIPA6NIX2 430 aaPredicted RBP16.33■□□□□ 0.2
GPC1-204ENST00000426280 CASP7P55210 303 aa16.33■□□□□ 0.2
GPC1-204ENST00000426280 GPSM2P81274 684 aa16.33■□□□□ 0.2
GPC1-204ENST00000426280 SLFN5Q08AF3 891 aa16.33■□□□□ 0.2
GPC1-204ENST00000426280 FKBP5Q13451 457 aaPredicted RBP16.33■□□□□ 0.2
GPC1-204ENST00000426280 MPNDQ8N594 471 aa16.33■□□□□ 0.2
GPC1-204ENST00000426280 GPR101Q96P66 508 aaPredicted RBP16.33■□□□□ 0.2
GPC1-204ENST00000426280 PDE8AO60658 829 aa16.32■□□□□ 0.2
GPC1-204ENST00000426280 GCKRQ14397 625 aa16.32■□□□□ 0.2
GPC1-204ENST00000426280 LARGE2Q8N3Y3 721 aa16.32■□□□□ 0.2
GPC1-204ENST00000426280 DNAAF4Q8WXU2 420 aa16.32■□□□□ 0.2
GPC1-204ENST00000426280 CHMP4AQ9BY43 222 aa16.32■□□□□ 0.2
GPC1-204ENST00000426280 DUOX1Q9NRD9 1551 aa16.32■□□□□ 0.2
GPC1-204ENST00000426280 POLLQ9UGP5 575 aa16.32■□□□□ 0.2
GPC1-204ENST00000426280 CDHR2Q9BYE9 1310 aa16.31■□□□□ 0.2
GPC1-204ENST00000426280 PPIP5K2O43314 1243 aa16.31■□□□□ 0.2
GPC1-204ENST00000426280 RPS8P62241 208 aaKnown RBP16.31■□□□□ 0.2
GPC1-204ENST00000426280 DPP8Q6V1X1 898 aaPredicted RBP16.31■□□□□ 0.2
GPC1-204ENST00000426280 C16orf71Q8IYS4 520 aaPredicted RBP16.31■□□□□ 0.2
GPC1-204ENST00000426280 TTLL11Q8NHH1 800 aa16.31■□□□□ 0.2
GPC1-204ENST00000426280 BEND3Q5T5X7 828 aa16.3■□□□□ 0.2
GPC1-204ENST00000426280 UBE3BQ7Z3V4 1068 aa16.3■□□□□ 0.2
GPC1-204ENST00000426280 TRMT2AQ8IZ69 625 aaKnown RBP16.3■□□□□ 0.2
GPC1-204ENST00000426280 MRPL50Q8N5N7 158 aaKnown RBP16.3■□□□□ 0.2
GPC1-204ENST00000426280 L3MBTL3Q96JM7 780 aaPredicted RBP16.3■□□□□ 0.2
GPC1-204ENST00000426280 NSFL1CQ9UNZ2 370 aaKnown RBP16.3■□□□□ 0.2
GPC1-204ENST00000426280 LTBP1Q14766 1721 aa16.29■□□□□ 0.2
GPC1-204ENST00000426280 YDJCA8MPS7 323 aa16.29■□□□□ 0.2
GPC1-204ENST00000426280 CXCL9Q07325 125 aa16.29■□□□□ 0.2
GPC1-204ENST00000426280 NEXNQ0ZGT2 675 aa16.29■□□□□ 0.2
GPC1-204ENST00000426280 GRIPAP1Q4V328 841 aa16.29■□□□□ 0.2
GPC1-204ENST00000426280 JDP2Q8WYK2 163 aa16.29■□□□□ 0.2
GPC1-204ENST00000426280 TAF1DQ9H5J8 278 aaPredicted RBP16.29■□□□□ 0.2
GPC1-204ENST00000426280 GREM2Q9H772 168 aa16.29■□□□□ 0.2
GPC1-204ENST00000426280 KCNQ5Q9NR82 932 aa16.29■□□□□ 0.2
GPC1-204ENST00000426280 GJA3Q9Y6H8 435 aa16.29■□□□□ 0.2
GPC1-204ENST00000426280 LRRC37AA6NMS7 1700 aa16.28■□□□□ 0.2
GPC1-204ENST00000426280 RIMBP2O15034 1052 aa16.28■□□□□ 0.2
GPC1-204ENST00000426280 CTSWP56202 376 aa16.28■□□□□ 0.2
GPC1-204ENST00000426280 KIAA2012Q0VF49 1180 aa16.28■□□□□ 0.2
GPC1-204ENST00000426280 FSTL1Q12841 308 aa16.28■□□□□ 0.2
GPC1-204ENST00000426280 DNAJC5GQ8N7S2 189 aa16.28■□□□□ 0.2
GPC1-204ENST00000426280 LINS1Q8NG48 757 aa16.28■□□□□ 0.2
GPC1-204ENST00000426280 E9PSI1 815 aa16.27■□□□□ 0.2
GPC1-204ENST00000426280 EPS15P42566 896 aa16.27■□□□□ 0.2
GPC1-204ENST00000426280 CCDC152Q4G0S7 254 aa16.27■□□□□ 0.2
GPC1-204ENST00000426280 EPHA10Q5JZY3 1008 aa16.27■□□□□ 0.2
GPC1-204ENST00000426280 NIM1KQ8IY84 436 aa16.27■□□□□ 0.2
GPC1-204ENST00000426280 SMC1BQ8NDV3 1235 aa16.27■□□□□ 0.2
GPC1-204ENST00000426280 SSH1Q8WYL5 1049 aa16.27■□□□□ 0.2
GPC1-204ENST00000426280 SHTN1A0MZ66 631 aa16.26■□□□□ 0.19
GPC1-204ENST00000426280 RAD17O75943 681 aa16.26■□□□□ 0.19
GPC1-204ENST00000426280 SCNN1DP51172 638 aa16.26■□□□□ 0.19
GPC1-204ENST00000426280 EIF6P56537 245 aaKnown RBP16.26■□□□□ 0.19
GPC1-204ENST00000426280 FOXO4P98177 505 aa16.26■□□□□ 0.19
GPC1-204ENST00000426280 DOK7Q18PE1 504 aa16.26■□□□□ 0.19
GPC1-204ENST00000426280 GPC2Q8N158 579 aa16.26■□□□□ 0.19
GPC1-204ENST00000426280 TBC1D16Q8TBP0 767 aa16.26■□□□□ 0.19
GPC1-204ENST00000426280 BCL2L13Q9BXK5 485 aa16.26■□□□□ 0.19
GPC1-204ENST00000426280 TMX4Q9H1E5 349 aaPredicted RBP16.26■□□□□ 0.19
GPC1-204ENST00000426280 ZNRF3Q9ULT6 936 aa16.26■□□□□ 0.19
GPC1-204ENST00000426280 C6orf229H3BNL8 230 aa16.25■□□□□ 0.19
GPC1-204ENST00000426280 CSF1RP07333 972 aa16.25■□□□□ 0.19
GPC1-204ENST00000426280 TMC4Q7Z404 712 aa16.25■□□□□ 0.19
GPC1-204ENST00000426280 SUPT20HQ8NEM7 779 aa16.25■□□□□ 0.19
GPC1-204ENST00000426280 PLA2G12BQ9BX93 195 aa16.25■□□□□ 0.19
GPC1-204ENST00000426280 VPS33BQ9H267 617 aa16.25■□□□□ 0.19
GPC1-204ENST00000426280 DBNDD1Q9H9R9 158 aa16.25■□□□□ 0.19
GPC1-204ENST00000426280 HACL1Q9UJ83 578 aa16.25■□□□□ 0.19
GPC1-204ENST00000426280 EPHX2P34913 555 aa16.24■□□□□ 0.19
GPC1-204ENST00000426280 EAPPQ56P03 285 aaPredicted RBP16.24■□□□□ 0.19
GPC1-204ENST00000426280 APLP1P51693 650 aa16.23■□□□□ 0.19
GPC1-204ENST00000426280 FMR1Q06787 632 aaKnown RBP eCLIP16.23■□□□□ 0.19
GPC1-204ENST00000426280 WASHC4Q2M389 1173 aa16.23■□□□□ 0.19
GPC1-204ENST00000426280 FAM161AQ3B820 660 aa16.23■□□□□ 0.19
GPC1-204ENST00000426280 CHADLQ6NUI6 762 aa16.23■□□□□ 0.19
GPC1-204ENST00000426280 SLC4A10Q6U841 1118 aa16.23■□□□□ 0.19
GPC1-204ENST00000426280 ANKRD18AQ8IVF6 992 aa16.23■□□□□ 0.19
GPC1-204ENST00000426280 KAZALD1Q96I82 304 aa16.23■□□□□ 0.19
GPC1-204ENST00000426280 PODXL2Q9NZ53 605 aa16.23■□□□□ 0.19
GPC1-204ENST00000426280 IQCA1LA6NCM1 817 aa16.22■□□□□ 0.19
GPC1-204ENST00000426280 ITGBL1O95965 494 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms