RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 PRAG1Q86YV5 1406 aa11.43□□□□□ -0.58
PTPRM-203ENST00000400060 CHUKO15111 745 aa11.43□□□□□ -0.58
PTPRM-203ENST00000400060 PER1O15534 1290 aaPredicted RBP11.43□□□□□ -0.58
PTPRM-203ENST00000400060 USO1O60763 962 aaKnown RBP11.43□□□□□ -0.58
PTPRM-203ENST00000400060 CDKL5O76039 1030 aa11.43□□□□□ -0.58
PTPRM-203ENST00000400060 ETF1P62495 437 aaKnown RBP11.43□□□□□ -0.58
PTPRM-203ENST00000400060 EIF3CLB5ME19 914 aaKnown RBP11.43□□□□□ -0.58
PTPRM-203ENST00000400060 GCOM1H8Y6P7 765 aaPredicted RBP11.43□□□□□ -0.58
PTPRM-203ENST00000400060 BUB1BO60566 1050 aaPredicted RBP11.43□□□□□ -0.58
PTPRM-203ENST00000400060 MYZAPP0CAP1 466 aa11.43□□□□□ -0.58
PTPRM-203ENST00000400060 EIF3CQ99613 913 aaKnown RBP11.43□□□□□ -0.58
PTPRM-203ENST00000400060 ZNF692Q9BU19 519 aaPredicted RBP11.43□□□□□ -0.58
PTPRM-203ENST00000400060 AOPEPQ8N6M6 819 aa11.43□□□□□ -0.58
PTPRM-203ENST00000400060 DCTPP1Q9H773 170 aa11.43□□□□□ -0.58
PTPRM-203ENST00000400060 FBXO3Q9UK99 471 aa11.43□□□□□ -0.58
PTPRM-203ENST00000400060 ODF2LQ9ULJ1 636 aa11.43□□□□□ -0.58
PTPRM-203ENST00000400060 NUTM2FA1L443 756 aa11.42□□□□□ -0.58
PTPRM-203ENST00000400060 BRPF1P55201 1214 aaPredicted RBP11.42□□□□□ -0.58
PTPRM-203ENST00000400060 DNM1Q05193 864 aaKnown RBP11.42□□□□□ -0.58
PTPRM-203ENST00000400060 WHAMMP3Q1A5X7 153 aa11.42□□□□□ -0.58
PTPRM-203ENST00000400060 CACNA2D4Q7Z3S7 1137 aa11.42□□□□□ -0.58
PTPRM-203ENST00000400060 SLC12A5Q9H2X9 1139 aa11.42□□□□□ -0.58
PTPRM-203ENST00000400060 ORC3Q9UBD5 711 aaPredicted RBP11.42□□□□□ -0.58
PTPRM-203ENST00000400060 CAPN7Q9Y6W3 813 aa11.42□□□□□ -0.58
PTPRM-203ENST00000400060 STIM1Q13586 685 aa11.42□□□□□ -0.58
PTPRM-203ENST00000400060 CCDC129Q6ZRS4 1044 aa11.42□□□□□ -0.58
PTPRM-203ENST00000400060 ALS2CR12Q96Q35 445 aa11.42□□□□□ -0.58
PTPRM-203ENST00000400060 NBPF3Q9H094 633 aa11.42□□□□□ -0.58
PTPRM-203ENST00000400060 VCXQ9H320 206 aa11.42□□□□□ -0.58
PTPRM-203ENST00000400060 ACTR5Q9H9F9 607 aaPredicted RBP11.42□□□□□ -0.58
PTPRM-203ENST00000400060 GNL3LQ9NVN8 582 aaKnown RBP11.42□□□□□ -0.58
PTPRM-203ENST00000400060 SLC52A1Q9NWF4 448 aa11.42□□□□□ -0.58
PTPRM-203ENST00000400060 NSD3Q9BZ95 1437 aa11.42□□□□□ -0.58
PTPRM-203ENST00000400060 CSB-PGBD3P0DP91 1061 aa11.42□□□□□ -0.58
PTPRM-203ENST00000400060 WWC2Q6AWC2 1192 aa11.42□□□□□ -0.58
PTPRM-203ENST00000400060 KANK3Q6NY19 840 aa11.42□□□□□ -0.58
PTPRM-203ENST00000400060 TRIM6Q9C030 488 aaPredicted RBP11.42□□□□□ -0.58
PTPRM-203ENST00000400060 TTF2Q9UNY4 1162 aaKnown RBP11.42□□□□□ -0.58
PTPRM-203ENST00000400060 ZNF521Q96K83 1311 aa11.42□□□□□ -0.58
PTPRM-203ENST00000400060 GLRX3O76003 335 aaKnown RBP11.42□□□□□ -0.58
PTPRM-203ENST00000400060 NBPF6Q5VWK0 638 aa11.42□□□□□ -0.58
PTPRM-203ENST00000400060 NBPF5PQ86XG9 351 aaPredicted RBP11.42□□□□□ -0.58
PTPRM-203ENST00000400060 NBPF4Q96M43 638 aa11.42□□□□□ -0.58
PTPRM-203ENST00000400060 FSD1Q9BTV5 496 aa11.42□□□□□ -0.58
PTPRM-203ENST00000400060 APBA1Q02410 837 aa11.41□□□□□ -0.58
PTPRM-203ENST00000400060 CEBPZQ03701 1054 aaKnown RBP11.41□□□□□ -0.58
PTPRM-203ENST00000400060 FBF1Q8TES7 1133 aa11.41□□□□□ -0.58
PTPRM-203ENST00000400060 IFT74Q96LB3 600 aa11.41□□□□□ -0.58
PTPRM-203ENST00000400060 PSMD1Q99460 953 aa11.41□□□□□ -0.58
PTPRM-203ENST00000400060 AOX1Q06278 1338 aa11.41□□□□□ -0.58
PTPRM-203ENST00000400060 XBP1P17861 261 aa11.41□□□□□ -0.58
PTPRM-203ENST00000400060 TRHP20396 242 aaPredicted RBP11.41□□□□□ -0.58
PTPRM-203ENST00000400060 LACTBP83111 547 aaPredicted RBP11.41□□□□□ -0.58
PTPRM-203ENST00000400060 SPA17Q15506 151 aa11.41□□□□□ -0.58
PTPRM-203ENST00000400060 KMT5BQ4FZB7 885 aa11.41□□□□□ -0.58
PTPRM-203ENST00000400060 VPS53Q5VIR6 699 aa11.41□□□□□ -0.58
PTPRM-203ENST00000400060 PLEKHM2Q8IWE5 1019 aa11.41□□□□□ -0.58
PTPRM-203ENST00000400060 ANKRD44Q8N8A2 993 aa11.41□□□□□ -0.58
PTPRM-203ENST00000400060 MRPS27Q92552 414 aaKnown RBP11.41□□□□□ -0.58
PTPRM-203ENST00000400060 RGS12O14924 1447 aa11.41□□□□□ -0.58
PTPRM-203ENST00000400060 KCNG4Q8TDN1 519 aa11.41□□□□□ -0.58
PTPRM-203ENST00000400060 CEP131Q9UPN4 1083 aa11.41□□□□□ -0.58
PTPRM-203ENST00000400060 PDCD2Q16342 344 aaPredicted RBP11.41□□□□□ -0.58
PTPRM-203ENST00000400060 LTV1Q96GA3 475 aaPredicted RBP11.41□□□□□ -0.58
PTPRM-203ENST00000400060 NBPF20Q3BBV1 942 aa11.4□□□□□ -0.58
PTPRM-203ENST00000400060 STMN4Q9H169 189 aaPredicted RBP11.4□□□□□ -0.58
PTPRM-203ENST00000400060 SUGP1Q8IWZ8 645 aaKnown RBP11.4□□□□□ -0.58
PTPRM-203ENST00000400060 ATRIPQ8WXE1 791 aa11.4□□□□□ -0.58
PTPRM-203ENST00000400060 TAF4BQ92750 862 aa11.4□□□□□ -0.58
PTPRM-203ENST00000400060 ITSN2Q9NZM3 1697 aa11.4□□□□□ -0.58
PTPRM-203ENST00000400060 WDHD1O75717 1129 aaPredicted RBP11.4□□□□□ -0.58
PTPRM-203ENST00000400060 NFE2L2Q16236 605 aa11.4□□□□□ -0.58
PTPRM-203ENST00000400060 CCHCR1Q8TD31 782 aa11.4□□□□□ -0.58
PTPRM-203ENST00000400060 YEATS2Q9ULM3 1422 aa11.4□□□□□ -0.59
PTPRM-203ENST00000400060 ZBTB22O15209 634 aa11.4□□□□□ -0.59
PTPRM-203ENST00000400060 SURF6O75683 361 aaKnown RBP11.4□□□□□ -0.59
PTPRM-203ENST00000400060 FERMT3Q86UX7 667 aa11.4□□□□□ -0.59
PTPRM-203ENST00000400060 NAPGQ99747 312 aaPredicted RBP11.4□□□□□ -0.59
PTPRM-203ENST00000400060 BAG1Q99933 345 aaPredicted RBP11.4□□□□□ -0.59
PTPRM-203ENST00000400060 TAOK2Q9UL54 1235 aa11.4□□□□□ -0.59
PTPRM-203ENST00000400060 PSME1Q06323 249 aa11.39□□□□□ -0.59
PTPRM-203ENST00000400060 KIF1BPQ96EK5 621 aa11.39□□□□□ -0.59
PTPRM-203ENST00000400060 CNNM3Q8NE01 707 aa11.39□□□□□ -0.59
PTPRM-203ENST00000400060 ARMC2Q8NEN0 867 aa11.39□□□□□ -0.59
PTPRM-203ENST00000400060 N4BP2L2Q92802 583 aaPredicted RBP11.39□□□□□ -0.59
PTPRM-203ENST00000400060 PLXNC1O60486 1568 aa11.39□□□□□ -0.59
PTPRM-203ENST00000400060 GADD45BO75293 160 aaPredicted RBP11.39□□□□□ -0.59
PTPRM-203ENST00000400060 IBSPP21815 317 aaPredicted RBP11.39□□□□□ -0.59
PTPRM-203ENST00000400060 GBP1P32455 592 aa11.39□□□□□ -0.59
PTPRM-203ENST00000400060 VAV2P52735 878 aa11.39□□□□□ -0.59
PTPRM-203ENST00000400060 CYB5RLQ6IPT4 315 aa11.39□□□□□ -0.59
PTPRM-203ENST00000400060 RALYLQ86SE5 291 aaKnown RBP11.39□□□□□ -0.59
PTPRM-203ENST00000400060 FAM210AQ96ND0 272 aa11.39□□□□□ -0.59
PTPRM-203ENST00000400060 GPATCH8Q9UKJ3 1502 aaKnown RBP11.39□□□□□ -0.59
PTPRM-203ENST00000400060 HMOX1P09601 288 aa11.38□□□□□ -0.59
PTPRM-203ENST00000400060 TEFQ10587 303 aa11.38□□□□□ -0.59
PTPRM-203ENST00000400060 SARM1Q6SZW1 724 aa11.38□□□□□ -0.59
PTPRM-203ENST00000400060 DTNBP1Q96EV8 351 aa11.38□□□□□ -0.59
PTPRM-203ENST00000400060 FAM135BQ49AJ0 1406 aa11.38□□□□□ -0.59
PTPRM-203ENST00000400060 ATP11AP98196 1134 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms