RNA–Protein interactions for RNA: ENST00000380913.7

SHROOM2-201, Transcript of shroom family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM2, Length 7,447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM2-201ENST00000380913 CALM3P0DP25 149 aa17.31■□□□□ 0.36
SHROOM2-201ENST00000380913 UBASH3AP57075 661 aa17.31■□□□□ 0.36
SHROOM2-201ENST00000380913 SELENOOQ9BVL4 669 aa17.31■□□□□ 0.36
SHROOM2-201ENST00000380913 STX8Q9UNK0 236 aa17.31■□□□□ 0.36
SHROOM2-201ENST00000380913 LRRC43Q8N309 656 aa17.31■□□□□ 0.36
SHROOM2-201ENST00000380913 IFI16Q16666 785 aaKnown RBP17.31■□□□□ 0.36
SHROOM2-201ENST00000380913 ZNF644Q9H582 1327 aaPredicted RBP17.31■□□□□ 0.36
SHROOM2-201ENST00000380913 GMNNO75496 209 aa17.31■□□□□ 0.36
SHROOM2-201ENST00000380913 CCDC170Q8IYT3 715 aa17.31■□□□□ 0.36
SHROOM2-201ENST00000380913 LRRC2Q9BYS8 371 aa17.31■□□□□ 0.36
SHROOM2-201ENST00000380913 DNAI1Q9UI46 699 aa17.31■□□□□ 0.36
SHROOM2-201ENST00000380913 CLEC11AQ9Y240 323 aa17.31■□□□□ 0.36
SHROOM2-201ENST00000380913 CCT6BQ92526 530 aa17.31■□□□□ 0.36
SHROOM2-201ENST00000380913 STAT6P42226 847 aa17.3■□□□□ 0.36
SHROOM2-201ENST00000380913 VPS18Q9P253 973 aa17.3■□□□□ 0.36
SHROOM2-201ENST00000380913 HEATR3Q7Z4Q2 680 aa17.3■□□□□ 0.36
SHROOM2-201ENST00000380913 CABP5Q9NP86 173 aa17.3■□□□□ 0.36
SHROOM2-201ENST00000380913 GNAT3A8MTJ3 354 aa17.3■□□□□ 0.36
SHROOM2-201ENST00000380913 GLRX3O76003 335 aaKnown RBP17.3■□□□□ 0.36
SHROOM2-201ENST00000380913 HSPA1LP34931 641 aa17.3■□□□□ 0.36
SHROOM2-201ENST00000380913 IARSP41252 1262 aaKnown RBP17.3■□□□□ 0.36
SHROOM2-201ENST00000380913 DUSP27Q5VZP5 1158 aa17.3■□□□□ 0.36
SHROOM2-201ENST00000380913 RPGRIP1LQ68CZ1 1315 aa17.3■□□□□ 0.36
SHROOM2-201ENST00000380913 METAP2P50579 478 aaKnown RBP eCLIP17.3■□□□□ 0.36
SHROOM2-201ENST00000380913 GSDMDP57764 484 aa17.3■□□□□ 0.36
SHROOM2-201ENST00000380913 GBP7Q8N8V2 638 aaPredicted RBP17.3■□□□□ 0.36
SHROOM2-201ENST00000380913 TRIM7Q9C029 511 aa17.3■□□□□ 0.36
SHROOM2-201ENST00000380913 CPLX4Q7Z7G2 160 aa17.29■□□□□ 0.36
SHROOM2-201ENST00000380913 ZNF165P49910 485 aa17.29■□□□□ 0.36
SHROOM2-201ENST00000380913 RABEP2Q9H5N1 569 aa17.29■□□□□ 0.36
SHROOM2-201ENST00000380913 CTAGE5O15320 804 aa17.29■□□□□ 0.36
SHROOM2-201ENST00000380913 PICALMQ13492 652 aa17.29■□□□□ 0.36
SHROOM2-201ENST00000380913 KARSQ15046 597 aaKnown RBP17.29■□□□□ 0.36
SHROOM2-201ENST00000380913 DACT3Q96B18 629 aaPredicted RBP17.29■□□□□ 0.36
SHROOM2-201ENST00000380913 IQSEC3Q9UPP2 1182 aaPredicted RBP17.29■□□□□ 0.36
SHROOM2-201ENST00000380913 ZBTB3Q9H5J0 574 aa17.28■□□□□ 0.36
SHROOM2-201ENST00000380913 RHOXF2BP0C7M4 288 aa17.28■□□□□ 0.36
SHROOM2-201ENST00000380913 CAPN2P17655 700 aa17.28■□□□□ 0.36
SHROOM2-201ENST00000380913 TAF7Q15545 349 aaPredicted RBP17.28■□□□□ 0.36
SHROOM2-201ENST00000380913 CCDC129Q6ZRS4 1044 aa17.28■□□□□ 0.36
SHROOM2-201ENST00000380913 RHOXF2Q9BQY4 288 aa17.28■□□□□ 0.36
SHROOM2-201ENST00000380913 PLVAPQ9BX97 442 aa17.28■□□□□ 0.36
SHROOM2-201ENST00000380913 CCDC88BA6NC98 1476 aa17.28■□□□□ 0.36
SHROOM2-201ENST00000380913 BRD4O60885 1362 aaPredicted RBP17.28■□□□□ 0.36
SHROOM2-201ENST00000380913 ORC3Q9UBD5 711 aaPredicted RBP17.28■□□□□ 0.36
SHROOM2-201ENST00000380913 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.27■□□□□ 0.36
SHROOM2-201ENST00000380913 FAM13AO94988 1023 aa17.27■□□□□ 0.36
SHROOM2-201ENST00000380913 PPP1R7Q15435 360 aa17.27■□□□□ 0.36
SHROOM2-201ENST00000380913 WHAMMQ8TF30 809 aa17.27■□□□□ 0.36
SHROOM2-201ENST00000380913 UBLCP1Q8WVY7 318 aaPredicted RBP17.27■□□□□ 0.36
SHROOM2-201ENST00000380913 TNPO1Q92973 898 aaKnown RBP17.27■□□□□ 0.36
SHROOM2-201ENST00000380913 PPP1R12CQ9BZL4 782 aa17.27■□□□□ 0.36
SHROOM2-201ENST00000380913 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.27■□□□□ 0.36
SHROOM2-201ENST00000380913 WDR66Q8TBY9 1149 aa17.27■□□□□ 0.36
SHROOM2-201ENST00000380913 PLIN2Q99541 437 aa17.27■□□□□ 0.36
SHROOM2-201ENST00000380913 PPANQ9NQ55 473 aaKnown RBP17.27■□□□□ 0.36
SHROOM2-201ENST00000380913 CIZ1Q9ULV3 898 aaPredicted RBP17.27■□□□□ 0.36
SHROOM2-201ENST00000380913 CTAGE15A4D2H0 777 aa17.26■□□□□ 0.35
SHROOM2-201ENST00000380913 CTAGE8P0CG41 777 aa17.26■□□□□ 0.35
SHROOM2-201ENST00000380913 HCLS1P14317 486 aaPredicted RBP17.26■□□□□ 0.35
SHROOM2-201ENST00000380913 CTAGE6Q86UF2 777 aa17.26■□□□□ 0.35
SHROOM2-201ENST00000380913 CTAGE4Q8IX94 777 aa17.26■□□□□ 0.35
SHROOM2-201ENST00000380913 NECAB1Q8N987 351 aa17.26■□□□□ 0.35
SHROOM2-201ENST00000380913 MARCKSP29966 332 aaPredicted RBP17.26■□□□□ 0.35
SHROOM2-201ENST00000380913 CCDC77Q9BR77 488 aa17.26■□□□□ 0.35
SHROOM2-201ENST00000380913 RNF41Q9H4P4 317 aaPredicted RBP17.26■□□□□ 0.35
SHROOM2-201ENST00000380913 ARFGAP3Q9NP61 516 aa17.26■□□□□ 0.35
SHROOM2-201ENST00000380913 CEP85LQ5SZL2 805 aa17.26■□□□□ 0.35
SHROOM2-201ENST00000380913 MFSD6Q6ZSS7 791 aa17.26■□□□□ 0.35
SHROOM2-201ENST00000380913 C10orf67Q8IYJ2 551 aa17.26■□□□□ 0.35
SHROOM2-201ENST00000380913 GTPBP4Q9BZE4 634 aaKnown RBP17.26■□□□□ 0.35
SHROOM2-201ENST00000380913 ATP5J2-PTCD1G3V325 749 aa17.26■□□□□ 0.35
SHROOM2-201ENST00000380913 HARSP12081 509 aaKnown RBP17.26■□□□□ 0.35
SHROOM2-201ENST00000380913 FMNL3Q8IVF7 1028 aa17.26■□□□□ 0.35
SHROOM2-201ENST00000380913 MAK16Q9BXY0 300 aaKnown RBP17.26■□□□□ 0.35
SHROOM2-201ENST00000380913 LIMCH1Q9UPQ0 1083 aa17.26■□□□□ 0.35
SHROOM2-201ENST00000380913 PPP1R12AO14974 1030 aaPredicted RBP17.26■□□□□ 0.35
SHROOM2-201ENST00000380913 KIF5BP33176 963 aa17.25■□□□□ 0.35
SHROOM2-201ENST00000380913 KRT9P35527 623 aa17.25■□□□□ 0.35
SHROOM2-201ENST00000380913 FCHSD2O94868 740 aa17.25■□□□□ 0.35
SHROOM2-201ENST00000380913 DIXDC1Q155Q3 683 aa17.25■□□□□ 0.35
SHROOM2-201ENST00000380913 CCDC102BQ68D86 513 aa17.25■□□□□ 0.35
SHROOM2-201ENST00000380913 RNASE9P60153 205 aaKnown RBP17.25■□□□□ 0.35
SHROOM2-201ENST00000380913 NBPF1Q3BBV0 1214 aa17.25■□□□□ 0.35
SHROOM2-201ENST00000380913 TACC3Q9Y6A5 838 aa17.25■□□□□ 0.35
SHROOM2-201ENST00000380913 SYKP43405 635 aa17.25■□□□□ 0.35
SHROOM2-201ENST00000380913 SARNPP82979 210 aaKnown RBP17.25■□□□□ 0.35
SHROOM2-201ENST00000380913 GABPAQ06546 454 aa17.25■□□□□ 0.35
SHROOM2-201ENST00000380913 STIM2Q9P246 746 aa17.25■□□□□ 0.35
SHROOM2-201ENST00000380913 ATP2A1O14983 1001 aa17.25■□□□□ 0.35
SHROOM2-201ENST00000380913 CCDC172P0C7W6 258 aa17.25■□□□□ 0.35
SHROOM2-201ENST00000380913 RBM26Q5T8P6 1007 aaKnown RBP17.25■□□□□ 0.35
SHROOM2-201ENST00000380913 PPME1Q9Y570 386 aa17.25■□□□□ 0.35
SHROOM2-201ENST00000380913 VPS52Q8N1B4 723 aa17.24■□□□□ 0.35
SHROOM2-201ENST00000380913 TSPY3P0CV98 308 aa17.24■□□□□ 0.35
SHROOM2-201ENST00000380913 TSPY8P0CW00 308 aa17.24■□□□□ 0.35
SHROOM2-201ENST00000380913 KIF5AQ12840 1032 aa17.24■□□□□ 0.35
SHROOM2-201ENST00000380913 ANO6Q4KMQ2 910 aa17.24■□□□□ 0.35
SHROOM2-201ENST00000380913 STMN2Q93045 179 aa17.24■□□□□ 0.35
SHROOM2-201ENST00000380913 IMPG2Q9BZV3 1241 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms