RNA–Protein interactions for RNA: ENST00000377612.8

COMMD6-202, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-202ENST00000377612 CCDC30Q5VVM6 783 aa23.06■■□□□ 1.28
COMMD6-202ENST00000377612 SP8Q8IXZ3 490 aa23.06■■□□□ 1.28
COMMD6-202ENST00000377612 CELF1Q92879 486 aaKnown RBP23.06■■□□□ 1.28
COMMD6-202ENST00000377612 RTFDC1Q9BY42 306 aaPredicted RBP23.06■■□□□ 1.28
COMMD6-202ENST00000377612 IQCA1LA6NCM1 817 aa23.05■■□□□ 1.28
COMMD6-202ENST00000377612 PPIP5K2O43314 1243 aa23.05■■□□□ 1.28
COMMD6-202ENST00000377612 SF3B3Q15393 1217 aaKnown RBP23.05■■□□□ 1.28
COMMD6-202ENST00000377612 CHADLQ6NUI6 762 aa23.05■■□□□ 1.28
COMMD6-202ENST00000377612 G2E3Q7L622 706 aa23.05■■□□□ 1.28
COMMD6-202ENST00000377612 GPC2Q8N158 579 aa23.05■■□□□ 1.28
COMMD6-202ENST00000377612 JDP2Q8WYK2 163 aa23.05■■□□□ 1.28
COMMD6-202ENST00000377612 IRS4O14654 1257 aaPredicted RBP23.04■■□□□ 1.28
COMMD6-202ENST00000377612 BBOX1O75936 387 aa23.04■■□□□ 1.28
COMMD6-202ENST00000377612 TWISTNBQ3B726 338 aaPredicted RBP23.04■■□□□ 1.28
COMMD6-202ENST00000377612 KLRG1Q96E93 195 aa23.04■■□□□ 1.28
COMMD6-202ENST00000377612 SALL2Q9Y467 1007 aaPredicted RBP23.04■■□□□ 1.28
COMMD6-202ENST00000377612 POLR2AP24928 1970 aaKnown RBP23.03■■□□□ 1.28
COMMD6-202ENST00000377612 ZBTB38Q8NAP3 1195 aaPredicted RBP23.03■■□□□ 1.28
COMMD6-202ENST00000377612 JARID2Q92833 1246 aaPredicted RBP23.03■■□□□ 1.28
COMMD6-202ENST00000377612 METTL22Q9BUU2 404 aaPredicted RBP23.03■■□□□ 1.28
COMMD6-202ENST00000377612 HACL1Q9UJ83 578 aa23.03■■□□□ 1.28
COMMD6-202ENST00000377612 EPHX2P34913 555 aa23.02■■□□□ 1.28
COMMD6-202ENST00000377612 SCNN1DP51172 638 aa23.02■■□□□ 1.28
COMMD6-202ENST00000377612 DPP8Q6V1X1 898 aaPredicted RBP23.02■■□□□ 1.28
COMMD6-202ENST00000377612 LDHDQ86WU2 507 aa23.02■■□□□ 1.28
COMMD6-202ENST00000377612 SPINK5Q9NQ38 1064 aaPredicted RBP23.02■■□□□ 1.28
COMMD6-202ENST00000377612 MAP3K2Q9Y2U5 619 aa23.02■■□□□ 1.28
COMMD6-202ENST00000377612 GJA3Q9Y6H8 435 aa23.02■■□□□ 1.28
COMMD6-202ENST00000377612 PASKQ96RG2 1323 aa23.02■■□□□ 1.28
COMMD6-202ENST00000377612 IGKV5-2P06315 115 aa23.01■■□□□ 1.27
COMMD6-202ENST00000377612 EIF6P56537 245 aaKnown RBP23.01■■□□□ 1.27
COMMD6-202ENST00000377612 NIM1KQ8IY84 436 aa23.01■■□□□ 1.27
COMMD6-202ENST00000377612 MPNDQ8N594 471 aa23.01■■□□□ 1.27
COMMD6-202ENST00000377612 CCDC191Q8NCU4 936 aa23.01■■□□□ 1.27
COMMD6-202ENST00000377612 PCCAP05165 728 aaPredicted RBP23■■□□□ 1.27
COMMD6-202ENST00000377612 EAPPQ56P03 285 aaPredicted RBP23■■□□□ 1.27
COMMD6-202ENST00000377612 CWC25Q9NXE8 425 aaPredicted RBP23■■□□□ 1.27
COMMD6-202ENST00000377612 PI4KAP2A4QPH2 592 aa22.99■■□□□ 1.27
COMMD6-202ENST00000377612 KIAA2012Q0VF49 1180 aa22.99■■□□□ 1.27
COMMD6-202ENST00000377612 KSR2Q6VAB6 950 aa22.99■■□□□ 1.27
COMMD6-202ENST00000377612 PI4KAP1Q8N8J0 262 aa22.99■■□□□ 1.27
COMMD6-202ENST00000377612 JMYQ8N9B5 988 aa22.99■■□□□ 1.27
COMMD6-202ENST00000377612 SEC31BQ9NQW1 1179 aa22.99■■□□□ 1.27
COMMD6-202ENST00000377612 DDX58O95786 925 aaKnown RBP22.98■■□□□ 1.27
COMMD6-202ENST00000377612 SUPT20HQ8NEM7 779 aa22.98■■□□□ 1.27
COMMD6-202ENST00000377612 YDJCA8MPS7 323 aa22.97■■□□□ 1.27
COMMD6-202ENST00000377612 EPS15P42566 896 aa22.97■■□□□ 1.27
COMMD6-202ENST00000377612 TMC4Q7Z404 712 aa22.97■■□□□ 1.27
COMMD6-202ENST00000377612 WDR63Q8IWG1 891 aa22.97■■□□□ 1.27
COMMD6-202ENST00000377612 FAM9BQ8IZU0 186 aa22.97■■□□□ 1.27
COMMD6-202ENST00000377612 STK31Q9BXU1 1019 aa22.97■■□□□ 1.27
COMMD6-202ENST00000377612 TMX4Q9H1E5 349 aaPredicted RBP22.97■■□□□ 1.27
COMMD6-202ENST00000377612 VPS33BQ9H267 617 aa22.97■■□□□ 1.27
COMMD6-202ENST00000377612 CDHR2Q9BYE9 1310 aa22.97■■□□□ 1.27
COMMD6-202ENST00000377612 ITGBL1O95965 494 aaPredicted RBP22.96■■□□□ 1.27
COMMD6-202ENST00000377612 GPSM2P81274 684 aa22.96■■□□□ 1.27
COMMD6-202ENST00000377612 CXCL9Q07325 125 aa22.96■■□□□ 1.27
COMMD6-202ENST00000377612 CWF19L2Q2TBE0 894 aaKnown RBP22.96■■□□□ 1.27
COMMD6-202ENST00000377612 GPR101Q96P66 508 aaPredicted RBP22.96■■□□□ 1.27
COMMD6-202ENST00000377612 ZNRF3Q9ULT6 936 aa22.96■■□□□ 1.27
COMMD6-202ENST00000377612 VAMP4O75379 141 aa22.95■■□□□ 1.26
COMMD6-202ENST00000377612 SLC4A2P04920 1241 aa22.95■■□□□ 1.26
COMMD6-202ENST00000377612 EXOSC9Q06265 439 aaKnown RBP22.95■■□□□ 1.26
COMMD6-202ENST00000377612 CCDC85AQ96PX6 553 aaPredicted RBP22.95■■□□□ 1.26
COMMD6-202ENST00000377612 THSD7BQ9C0I4 1608 aa22.95■■□□□ 1.26
COMMD6-202ENST00000377612 NEURL1BA8MQ27 555 aa22.94■■□□□ 1.26
COMMD6-202ENST00000377612 PDE8AO60658 829 aa22.94■■□□□ 1.26
COMMD6-202ENST00000377612 FLIIQ13045 1269 aa22.94■■□□□ 1.26
COMMD6-202ENST00000377612 MAP1SQ66K74 1059 aaPredicted RBP22.94■■□□□ 1.26
COMMD6-202ENST00000377612 POLLQ9UGP5 575 aa22.94■■□□□ 1.26
COMMD6-202ENST00000377612 ZNF521Q96K83 1311 aa22.93■■□□□ 1.26
COMMD6-202ENST00000377612 CHMP4AQ9BY43 222 aa22.93■■□□□ 1.26
COMMD6-202ENST00000377612 CREBZFQ9NS37 354 aa22.93■■□□□ 1.26
COMMD6-202ENST00000377612 RPS8P62241 208 aaKnown RBP22.92■■□□□ 1.26
COMMD6-202ENST00000377612 PNMA8AQ86V59 439 aaPredicted RBP22.92■■□□□ 1.26
COMMD6-202ENST00000377612 GPRC5DQ9NZD1 345 aa22.92■■□□□ 1.26
COMMD6-202ENST00000377612 NSFL1CQ9UNZ2 370 aaKnown RBP22.92■■□□□ 1.26
COMMD6-202ENST00000377612 CLEC11AQ9Y240 323 aa22.92■■□□□ 1.26
COMMD6-202ENST00000377612 SHTN1A0MZ66 631 aa22.91■■□□□ 1.26
COMMD6-202ENST00000377612 RAD17O75943 681 aa22.91■■□□□ 1.26
COMMD6-202ENST00000377612 LMOD1P29536 600 aaPredicted RBP22.91■■□□□ 1.26
COMMD6-202ENST00000377612 GMPSP49915 693 aaPredicted RBP22.91■■□□□ 1.26
COMMD6-202ENST00000377612 CTSWP56202 376 aa22.91■■□□□ 1.26
COMMD6-202ENST00000377612 CCDC152Q4G0S7 254 aa22.9■■□□□ 1.26
COMMD6-202ENST00000377612 CIAPIN1Q6FI81 312 aa22.9■■□□□ 1.26
COMMD6-202ENST00000377612 TBC1D16Q8TBP0 767 aa22.9■■□□□ 1.26
COMMD6-202ENST00000377612 DBNDD1Q9H9R9 158 aa22.9■■□□□ 1.26
COMMD6-202ENST00000377612 RTL9Q8NET4 1388 aa22.89■■□□□ 1.26
COMMD6-202ENST00000377612 FMR1Q06787 632 aaKnown RBP eCLIP22.89■■□□□ 1.25
COMMD6-202ENST00000377612 MKRN1Q9UHC7 482 aaKnown RBP22.89■■□□□ 1.25
COMMD6-202ENST00000377612 CNTNAP1P78357 1384 aa22.89■■□□□ 1.25
COMMD6-202ENST00000377612 RIMBP2O15034 1052 aa22.88■■□□□ 1.25
COMMD6-202ENST00000377612 CASP7P55210 303 aa22.88■■□□□ 1.25
COMMD6-202ENST00000377612 NEXNQ0ZGT2 675 aa22.88■■□□□ 1.25
COMMD6-202ENST00000377612 FKBP5Q13451 457 aaPredicted RBP22.88■■□□□ 1.25
COMMD6-202ENST00000377612 WASHC4Q2M389 1173 aa22.88■■□□□ 1.25
COMMD6-202ENST00000377612 UBE3BQ7Z3V4 1068 aa22.88■■□□□ 1.25
COMMD6-202ENST00000377612 CNTROBQ8N137 903 aa22.88■■□□□ 1.25
COMMD6-202ENST00000377612 PODXL2Q9NZ53 605 aa22.88■■□□□ 1.25
COMMD6-202ENST00000377612 C6orf229H3BNL8 230 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms