RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 CEP112Q8N8E3 955 aa18.4■□□□□ 0.54
CLSTN1-201ENST00000361311 MAP3K2Q9Y2U5 619 aa18.4■□□□□ 0.54
CLSTN1-201ENST00000361311 SPTLC2O15270 562 aa18.4■□□□□ 0.54
CLSTN1-201ENST00000361311 IFIT1P09914 478 aaKnown RBP18.4■□□□□ 0.54
CLSTN1-201ENST00000361311 LUC7LQ9NQ29 371 aaKnown RBP18.4■□□□□ 0.54
CLSTN1-201ENST00000361311 ZFYVE9O95405 1425 aa18.39■□□□□ 0.54
CLSTN1-201ENST00000361311 CCDC175P0C221 793 aa18.39■□□□□ 0.53
CLSTN1-201ENST00000361311 RNF187Q5TA31 235 aaPredicted RBP18.39■□□□□ 0.53
CLSTN1-201ENST00000361311 DHX37Q8IY37 1157 aaKnown RBP18.39■□□□□ 0.53
CLSTN1-201ENST00000361311 MICALL1Q8N3F8 863 aa18.39■□□□□ 0.53
CLSTN1-201ENST00000361311 MTMR6Q9Y217 621 aa18.39■□□□□ 0.53
CLSTN1-201ENST00000361311 EPS15P42566 896 aa18.39■□□□□ 0.53
CLSTN1-201ENST00000361311 EIF4A2Q14240 407 aaKnown RBP18.39■□□□□ 0.53
CLSTN1-201ENST00000361311 JARID2Q92833 1246 aaPredicted RBP18.39■□□□□ 0.53
CLSTN1-201ENST00000361311 PUF60Q9UHX1 559 aaKnown RBP18.39■□□□□ 0.53
CLSTN1-201ENST00000361311 POGZQ7Z3K3 1410 aa18.39■□□□□ 0.53
CLSTN1-201ENST00000361311 PNMA6EA0A0J9YXQ4 647 aa18.39■□□□□ 0.53
CLSTN1-201ENST00000361311 PPP2R3AQ06190 1150 aa18.39■□□□□ 0.53
CLSTN1-201ENST00000361311 ADGRL1O94910 1474 aa18.39■□□□□ 0.53
CLSTN1-201ENST00000361311 YEATS4O95619 227 aa18.38■□□□□ 0.53
CLSTN1-201ENST00000361311 EVA1CP58658 441 aa18.38■□□□□ 0.53
CLSTN1-201ENST00000361311 PROSER2Q86WR7 435 aaPredicted RBP18.38■□□□□ 0.53
CLSTN1-201ENST00000361311 NRBP1Q9UHY1 535 aa18.38■□□□□ 0.53
CLSTN1-201ENST00000361311 A0A1B0GVL5 298 aa18.38■□□□□ 0.53
CLSTN1-201ENST00000361311 MARCKSP29966 332 aaPredicted RBP18.38■□□□□ 0.53
CLSTN1-201ENST00000361311 PA2G4Q9UQ80 394 aaKnown RBP18.38■□□□□ 0.53
CLSTN1-201ENST00000361311 MYO6Q9UM54 1294 aa18.38■□□□□ 0.53
CLSTN1-201ENST00000361311 KIF24Q5T7B8 1368 aa18.38■□□□□ 0.53
CLSTN1-201ENST00000361311 GOLIM4O00461 696 aa18.38■□□□□ 0.53
CLSTN1-201ENST00000361311 USHBP1Q8N6Y0 703 aa18.38■□□□□ 0.53
CLSTN1-201ENST00000361311 GTF2E1P29083 439 aaPredicted RBP18.37■□□□□ 0.53
CLSTN1-201ENST00000361311 MICALCLQ6ZW33 695 aa18.37■□□□□ 0.53
CLSTN1-201ENST00000361311 TTC6Q86TZ1 520 aa18.37■□□□□ 0.53
CLSTN1-201ENST00000361311 SIRT2Q8IXJ6 389 aa18.37■□□□□ 0.53
CLSTN1-201ENST00000361311 RGS12O14924 1447 aa18.37■□□□□ 0.53
CLSTN1-201ENST00000361311 AOX1Q06278 1338 aa18.37■□□□□ 0.53
CLSTN1-201ENST00000361311 ADGBQ8N7X0 1667 aa18.37■□□□□ 0.53
CLSTN1-201ENST00000361311 OAS2P29728 719 aaKnown RBP18.37■□□□□ 0.53
CLSTN1-201ENST00000361311 DDX46Q7L014 1031 aaKnown RBP18.37■□□□□ 0.53
CLSTN1-201ENST00000361311 RIMS2Q9UQ26 1411 aa18.37■□□□□ 0.53
CLSTN1-201ENST00000361311 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.37■□□□□ 0.532e-6■■■■■ 28
CLSTN1-201ENST00000361311 A0A1B0GUL7 405 aa18.37■□□□□ 0.53
CLSTN1-201ENST00000361311 HAND2P61296 217 aa18.37■□□□□ 0.53
CLSTN1-201ENST00000361311 CCDC57Q2TAC2 916 aa18.37■□□□□ 0.53
CLSTN1-201ENST00000361311 PTPDC1A2A3K4 754 aa18.37■□□□□ 0.53
CLSTN1-201ENST00000361311 SPA17Q15506 151 aa18.37■□□□□ 0.53
CLSTN1-201ENST00000361311 NBPF11Q86T75 865 aa18.37■□□□□ 0.53
CLSTN1-201ENST00000361311 LZTFL1Q9NQ48 299 aa18.37■□□□□ 0.53
CLSTN1-201ENST00000361311 IMPACTQ9P2X3 320 aa18.37■□□□□ 0.53
CLSTN1-201ENST00000361311 SLC26A8Q96RN1 970 aa18.36■□□□□ 0.53
CLSTN1-201ENST00000361311 MYD88Q99836 296 aa18.36■□□□□ 0.53
CLSTN1-201ENST00000361311 RHOXF2BP0C7M4 288 aa18.36■□□□□ 0.53
CLSTN1-201ENST00000361311 ZSCAN26Q16670 478 aa18.36■□□□□ 0.53
CLSTN1-201ENST00000361311 HDXQ7Z353 690 aa18.36■□□□□ 0.53
CLSTN1-201ENST00000361311 VPS37DQ86XT2 251 aa18.36■□□□□ 0.53
CLSTN1-201ENST00000361311 LRRC8AQ8IWT6 810 aa18.36■□□□□ 0.53
CLSTN1-201ENST00000361311 CCDC82Q8N4S0 544 aa18.36■□□□□ 0.53
CLSTN1-201ENST00000361311 RHOXF2Q9BQY4 288 aa18.36■□□□□ 0.53
CLSTN1-201ENST00000361311 NACAP1Q9BZK3 213 aa18.36■□□□□ 0.53
CLSTN1-201ENST00000361311 ZNF213O14771 459 aa18.36■□□□□ 0.53
CLSTN1-201ENST00000361311 PLEKHF1Q96S99 279 aa18.36■□□□□ 0.53
CLSTN1-201ENST00000361311 SSH2Q76I76 1423 aa18.35■□□□□ 0.53
CLSTN1-201ENST00000361311 CTAGE9A4FU28 777 aa18.35■□□□□ 0.53
CLSTN1-201ENST00000361311 CHL1O00533 1208 aa18.35■□□□□ 0.53
CLSTN1-201ENST00000361311 KIF2CQ99661 725 aa18.35■□□□□ 0.53
CLSTN1-201ENST00000361311 KLF18A0A0U1RQI7 1052 aa18.35■□□□□ 0.53
CLSTN1-201ENST00000361311 PAFAH1B1P43034 410 aa18.35■□□□□ 0.53
CLSTN1-201ENST00000361311 NEK11Q8NG66 645 aa18.35■□□□□ 0.53
CLSTN1-201ENST00000361311 SYNMO15061 1565 aa18.35■□□□□ 0.53
CLSTN1-201ENST00000361311 GOLGA6L7A0A1B0GV03 622 aa18.35■□□□□ 0.53
CLSTN1-201ENST00000361311 RPS6KB1P23443 525 aa18.35■□□□□ 0.53
CLSTN1-201ENST00000361311 CNNM1Q9NRU3 951 aa18.35■□□□□ 0.53
CLSTN1-201ENST00000361311 CHPF2Q9P2E5 772 aa18.35■□□□□ 0.53
CLSTN1-201ENST00000361311 PLCH2O75038 1416 aa18.34■□□□□ 0.53
CLSTN1-201ENST00000361311 EBAG9O00559 213 aa18.34■□□□□ 0.53
CLSTN1-201ENST00000361311 IDH1O75874 414 aaKnown RBP18.34■□□□□ 0.53
CLSTN1-201ENST00000361311 BAG1Q99933 345 aaPredicted RBP18.34■□□□□ 0.53
CLSTN1-201ENST00000361311 MTMR7Q9Y216 660 aa18.34■□□□□ 0.53
CLSTN1-201ENST00000361311 FOXO3O43524 673 aa18.34■□□□□ 0.53
CLSTN1-201ENST00000361311 ERLIN2O94905 339 aa18.34■□□□□ 0.53
CLSTN1-201ENST00000361311 MYL5Q02045 173 aa18.34■□□□□ 0.53
CLSTN1-201ENST00000361311 SYCP1Q15431 976 aa18.34■□□□□ 0.53
CLSTN1-201ENST00000361311 ME3Q16798 604 aa18.34■□□□□ 0.53
CLSTN1-201ENST00000361311 KDM5AP29375 1690 aaKnown RBP18.34■□□□□ 0.53
CLSTN1-201ENST00000361311 N4BP3O15049 544 aa18.34■□□□□ 0.53
CLSTN1-201ENST00000361311 NR1I2O75469 434 aa18.34■□□□□ 0.53
CLSTN1-201ENST00000361311 IARSP41252 1262 aaKnown RBP18.34■□□□□ 0.53
CLSTN1-201ENST00000361311 ATL3Q6DD88 541 aa18.34■□□□□ 0.53
CLSTN1-201ENST00000361311 ANKLE2Q86XL3 938 aa18.34■□□□□ 0.53
CLSTN1-201ENST00000361311 CACTINQ8WUQ7 758 aaKnown RBP18.34■□□□□ 0.53
CLSTN1-201ENST00000361311 HYPKQ9NX55 129 aa18.34■□□□□ 0.53
CLSTN1-201ENST00000361311 MRVI1Q9Y6F6 885 aa18.34■□□□□ 0.53
CLSTN1-201ENST00000361311 IL13P35225 146 aa18.34■□□□□ 0.53
CLSTN1-201ENST00000361311 TUBB4BP68371 445 aa18.34■□□□□ 0.53
CLSTN1-201ENST00000361311 APOBRQ0VD83 1088 aa18.34■□□□□ 0.53
CLSTN1-201ENST00000361311 MTHFSDQ2M296 383 aaKnown RBP18.34■□□□□ 0.53
CLSTN1-201ENST00000361311 UBAC1Q9BSL1 405 aa18.34■□□□□ 0.53
CLSTN1-201ENST00000361311 DISP1Q96F81 1524 aa18.33■□□□□ 0.53
CLSTN1-201ENST00000361311 MCMDC2Q4G0Z9 681 aa18.33■□□□□ 0.53
CLSTN1-201ENST00000361311 SLC27A2O14975 620 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms