RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 CASP7P55210 303 aa6.53□□□□□ -1.36
VPS50-202ENST00000305866 ZSCAN25Q6NSZ9 544 aa6.53□□□□□ -1.36
VPS50-202ENST00000305866 CACTINQ8WUQ7 758 aaKnown RBP6.53□□□□□ -1.36
VPS50-202ENST00000305866 STK31Q9BXU1 1019 aa6.53□□□□□ -1.36
VPS50-202ENST00000305866 L2HGDHQ9H9P8 463 aa6.53□□□□□ -1.36
VPS50-202ENST00000305866 HDAC5Q9UQL6 1122 aa6.53□□□□□ -1.36
VPS50-202ENST00000305866 ATAD5Q96QE3 1844 aa6.53□□□□□ -1.36
VPS50-202ENST00000305866 ZBTB22O15209 634 aa6.52□□□□□ -1.36
VPS50-202ENST00000305866 H2AFXP16104 143 aaPredicted RBP6.52□□□□□ -1.36
VPS50-202ENST00000305866 PPP1R42Q7Z4L9 355 aa6.52□□□□□ -1.36
VPS50-202ENST00000305866 GOLPH3LQ9H4A5 285 aa6.52□□□□□ -1.36
VPS50-202ENST00000305866 CBX8Q9HC52 389 aa6.52□□□□□ -1.36
VPS50-202ENST00000305866 NKX1-1Q15270 411 aaPredicted RBP6.52□□□□□ -1.37
VPS50-202ENST00000305866 ANKLE2Q86XL3 938 aa6.52□□□□□ -1.37
VPS50-202ENST00000305866 KIF18AQ8NI77 898 aa6.52□□□□□ -1.37
VPS50-202ENST00000305866 SLC26A8Q96RN1 970 aa6.52□□□□□ -1.37
VPS50-202ENST00000305866 PRDM10Q9NQV6 1147 aa6.52□□□□□ -1.37
VPS50-202ENST00000305866 KCNQ3O43525 872 aa6.52□□□□□ -1.37
VPS50-202ENST00000305866 IFIT2P09913 472 aaKnown RBP6.52□□□□□ -1.37
VPS50-202ENST00000305866 U2AF2P26368 475 aaKnown RBP eCLIP6.52□□□□□ -1.375e-6■■■□□ 19.2
VPS50-202ENST00000305866 ZNF75DP51815 510 aa6.52□□□□□ -1.37
VPS50-202ENST00000305866 KMT5BQ4FZB7 885 aa6.52□□□□□ -1.37
VPS50-202ENST00000305866 GLIPR1L2Q4G1C9 344 aa6.52□□□□□ -1.37
VPS50-202ENST00000305866 KSR2Q6VAB6 950 aa6.52□□□□□ -1.37
VPS50-202ENST00000305866 NUTM1Q86Y26 1132 aa6.52□□□□□ -1.37
VPS50-202ENST00000305866 ERC1Q8IUD2 1116 aa6.52□□□□□ -1.37
VPS50-202ENST00000305866 NKX2-3Q8TAU0 364 aa6.52□□□□□ -1.37
VPS50-202ENST00000305866 TMX1Q9H3N1 280 aa6.52□□□□□ -1.37
VPS50-202ENST00000305866 DBF4Q9UBU7 674 aaPredicted RBP6.52□□□□□ -1.37
VPS50-202ENST00000305866 ZRANB2O95218 330 aaKnown RBP eCLIP6.51□□□□□ -1.37
VPS50-202ENST00000305866 KIF20AO95235 890 aa6.51□□□□□ -1.37
VPS50-202ENST00000305866 CHGBP05060 677 aa6.51□□□□□ -1.37
VPS50-202ENST00000305866 GJB2P29033 226 aa6.51□□□□□ -1.37
VPS50-202ENST00000305866 AMPHP49418 695 aa6.51□□□□□ -1.37
VPS50-202ENST00000305866 EVCP57679 992 aa6.51□□□□□ -1.37
VPS50-202ENST00000305866 ARID5BQ14865 1188 aa6.51□□□□□ -1.37
VPS50-202ENST00000305866 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.51□□□□□ -1.37
VPS50-202ENST00000305866 TMEM139Q8IV31 216 aa6.51□□□□□ -1.37
VPS50-202ENST00000305866 DNAAF4Q8WXU2 420 aa6.51□□□□□ -1.37
VPS50-202ENST00000305866 LARP6Q9BRS8 491 aaKnown RBP6.51□□□□□ -1.37
VPS50-202ENST00000305866 CLSTN2Q9H4D0 955 aa6.51□□□□□ -1.37
VPS50-202ENST00000305866 TLR7Q9NYK1 1049 aaKnown RBP6.51□□□□□ -1.37
VPS50-202ENST00000305866 ABCC12Q96J65 1359 aa6.51□□□□□ -1.37
VPS50-202ENST00000305866 LAMB1P07942 1786 aa6.51□□□□□ -1.37
VPS50-202ENST00000305866 LETM1O95202 739 aaPredicted RBP6.51□□□□□ -1.37
VPS50-202ENST00000305866 PTGS1P23219 599 aa6.51□□□□□ -1.37
VPS50-202ENST00000305866 PPP4R3BQ5MIZ7 849 aa6.51□□□□□ -1.37
VPS50-202ENST00000305866 STOX1Q6ZVD7 989 aa6.51□□□□□ -1.37
VPS50-202ENST00000305866 ZNF589Q86UQ0 364 aaPredicted RBP6.51□□□□□ -1.37
VPS50-202ENST00000305866 A0A0D9SFI3 127 aa6.51□□□□□ -1.37
VPS50-202ENST00000305866 SLC27A2O14975 620 aa6.51□□□□□ -1.37
VPS50-202ENST00000305866 NR1I2O75469 434 aa6.51□□□□□ -1.37
VPS50-202ENST00000305866 NLRP6P59044 892 aa6.51□□□□□ -1.37
VPS50-202ENST00000305866 NCAPHQ15003 741 aa6.51□□□□□ -1.37
VPS50-202ENST00000305866 PLEKHO1Q53GL0 409 aaPredicted RBP6.51□□□□□ -1.37
VPS50-202ENST00000305866 FOXD4L5Q5VV16 416 aaPredicted RBP6.51□□□□□ -1.37
VPS50-202ENST00000305866 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.51□□□□□ -1.37
VPS50-202ENST00000305866 FOXD4L4Q8WXT5 416 aaPredicted RBP6.51□□□□□ -1.37
VPS50-202ENST00000305866 GPR108Q9NPR9 543 aa6.51□□□□□ -1.37
VPS50-202ENST00000305866 DDX21Q9NR30 783 aaKnown RBP eCLIP6.51□□□□□ -1.37
VPS50-202ENST00000305866 MYH8P13535 1937 aa6.51□□□□□ -1.37
VPS50-202ENST00000305866 NRAPQ86VF7 1730 aa6.5□□□□□ -1.37
VPS50-202ENST00000305866 GTF2E1P29083 439 aaPredicted RBP6.5□□□□□ -1.37
VPS50-202ENST00000305866 CEBPAP49715 358 aaPredicted RBP6.5□□□□□ -1.37
VPS50-202ENST00000305866 PROSER3Q2NL68 480 aa6.5□□□□□ -1.37
VPS50-202ENST00000305866 SLFNL1Q499Z3 407 aa6.5□□□□□ -1.37
VPS50-202ENST00000305866 C11orf57Q6ZUT1 292 aaPredicted RBP6.5□□□□□ -1.37
VPS50-202ENST00000305866 LUZP1Q86V48 1076 aa6.5□□□□□ -1.37
VPS50-202ENST00000305866 NGDNQ8NEJ9 315 aaKnown RBP6.5□□□□□ -1.37
VPS50-202ENST00000305866 LINS1Q8NG48 757 aa6.5□□□□□ -1.37
VPS50-202ENST00000305866 FHOD1Q9Y613 1164 aa6.5□□□□□ -1.37
VPS50-202ENST00000305866 CDK5RAP2Q96SN8 1893 aa6.5□□□□□ -1.37
VPS50-202ENST00000305866 DISP2A7MBM2 1401 aa6.5□□□□□ -1.37
VPS50-202ENST00000305866 GLRX3O76003 335 aaKnown RBP6.5□□□□□ -1.37
VPS50-202ENST00000305866 TYRO3Q06418 890 aa6.5□□□□□ -1.37
VPS50-202ENST00000305866 FAM200AQ8TCP9 573 aa6.5□□□□□ -1.37
VPS50-202ENST00000305866 LEO1Q8WVC0 666 aaPredicted RBP6.5□□□□□ -1.37
VPS50-202ENST00000305866 COPRSQ9NQ92 184 aa6.5□□□□□ -1.37
VPS50-202ENST00000305866 NUP98P52948 1817 aa6.5□□□□□ -1.37
VPS50-202ENST00000305866 ATRNO75882 1429 aa6.5□□□□□ -1.37
VPS50-202ENST00000305866 SCN7AQ01118 1682 aa6.5□□□□□ -1.37
VPS50-202ENST00000305866 IGKV5-2P06315 115 aa6.5□□□□□ -1.37
VPS50-202ENST00000305866 UBTFL1P0CB47 393 aaPredicted RBP6.5□□□□□ -1.37
VPS50-202ENST00000305866 EXOSC10Q01780 885 aaKnown RBP6.5□□□□□ -1.37
VPS50-202ENST00000305866 CREB3L3Q68CJ9 461 aa6.5□□□□□ -1.37
VPS50-202ENST00000305866 TRIM65Q6PJ69 517 aa6.5□□□□□ -1.37
VPS50-202ENST00000305866 MPNDQ8N594 471 aa6.5□□□□□ -1.37
VPS50-202ENST00000305866 FAM227BQ96M60 508 aa6.5□□□□□ -1.37
VPS50-202ENST00000305866 IL1RAPL2Q9NP60 686 aa6.5□□□□□ -1.37
VPS50-202ENST00000305866 ATG3Q9NT62 314 aa6.5□□□□□ -1.37
VPS50-202ENST00000305866 COL14A1Q05707 1796 aaKnown RBP6.49□□□□□ -1.37
VPS50-202ENST00000305866 HIP1O00291 1037 aa6.49□□□□□ -1.37
VPS50-202ENST00000305866 GCP02774 474 aa6.49□□□□□ -1.37
VPS50-202ENST00000305866 CAPN2P17655 700 aa6.49□□□□□ -1.37
VPS50-202ENST00000305866 MCCP23508 829 aa6.49□□□□□ -1.37
VPS50-202ENST00000305866 MLECQ14165 292 aa6.49□□□□□ -1.37
VPS50-202ENST00000305866 FAM173BQ6P4H8 233 aa6.49□□□□□ -1.37
VPS50-202ENST00000305866 LRRC8AQ8IWT6 810 aa6.49□□□□□ -1.37
VPS50-202ENST00000305866 EAF2Q96CJ1 260 aaPredicted RBP6.49□□□□□ -1.37
VPS50-202ENST00000305866 SPG7Q9UQ90 795 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms