RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 USHBP1Q8N6Y0 703 aa20.88■□□□□ 0.93
CDKN1B-201ENST00000228872 RBM6P78332 1123 aaKnown RBP20.88■□□□□ 0.93
CDKN1B-201ENST00000228872 LARP1BQ659C4 914 aaKnown RBP20.88■□□□□ 0.93
CDKN1B-201ENST00000228872 NYAP1Q6ZVC0 841 aa20.88■□□□□ 0.93
CDKN1B-201ENST00000228872 NECAB1Q8N987 351 aa20.88■□□□□ 0.93
CDKN1B-201ENST00000228872 ZSWIM6Q9HCJ5 1215 aa20.88■□□□□ 0.93
CDKN1B-201ENST00000228872 ERBB3P21860 1342 aa20.87■□□□□ 0.93
CDKN1B-201ENST00000228872 SLFNL1Q499Z3 407 aa20.87■□□□□ 0.93
CDKN1B-201ENST00000228872 LRRC8AQ8IWT6 810 aa20.87■□□□□ 0.93
CDKN1B-201ENST00000228872 SSH3Q8TE77 659 aa20.87■□□□□ 0.93
CDKN1B-201ENST00000228872 ERO1AQ96HE7 468 aa20.87■□□□□ 0.93
CDKN1B-201ENST00000228872 DNAJC25Q9H1X3 360 aa20.87■□□□□ 0.93
CDKN1B-201ENST00000228872 ROBO1Q9Y6N7 1651 aa20.87■□□□□ 0.93
CDKN1B-201ENST00000228872 RAB11FIP3O75154 756 aa20.87■□□□□ 0.93
CDKN1B-201ENST00000228872 ELF2Q15723 593 aa20.87■□□□□ 0.93
CDKN1B-201ENST00000228872 LRRC59Q96AG4 307 aaKnown RBP20.87■□□□□ 0.93
CDKN1B-201ENST00000228872 CYP46A1Q9Y6A2 500 aa20.87■□□□□ 0.93
CDKN1B-201ENST00000228872 PTPN14Q15678 1187 aa20.86■□□□□ 0.93
CDKN1B-201ENST00000228872 TM6SF1Q9BZW5 370 aa20.86■□□□□ 0.93
CDKN1B-201ENST00000228872 MAP3K5Q99683 1374 aa20.86■□□□□ 0.93
CDKN1B-201ENST00000228872 GOLGA6L4A6NEF3 574 aa20.86■□□□□ 0.93
CDKN1B-201ENST00000228872 CABLES1Q8TDN4 633 aa20.86■□□□□ 0.93
CDKN1B-201ENST00000228872 ERICH4A6NGS2 130 aa20.85■□□□□ 0.93
CDKN1B-201ENST00000228872 FAM193AP78312 1265 aa20.85■□□□□ 0.93
CDKN1B-201ENST00000228872 RHPN1Q8TCX5 695 aa20.85■□□□□ 0.93
CDKN1B-201ENST00000228872 GNAT3A8MTJ3 354 aa20.85■□□□□ 0.93
CDKN1B-201ENST00000228872 NEMFO60524 1076 aa20.85■□□□□ 0.93
CDKN1B-201ENST00000228872 PTH1RQ03431 593 aa20.85■□□□□ 0.93
CDKN1B-201ENST00000228872 ARID5BQ14865 1188 aa20.85■□□□□ 0.93
CDKN1B-201ENST00000228872 PRPF40BQ6NWY9 871 aaKnown RBP20.85■□□□□ 0.93
CDKN1B-201ENST00000228872 ST7Q9NRC1 585 aa20.85■□□□□ 0.93
CDKN1B-201ENST00000228872 CALCOCO1Q9P1Z2 691 aa20.85■□□□□ 0.93
CDKN1B-201ENST00000228872 AHDC1Q5TGY3 1603 aaPredicted RBP20.85■□□□□ 0.93
CDKN1B-201ENST00000228872 SURF6O75683 361 aaKnown RBP20.84■□□□□ 0.93
CDKN1B-201ENST00000228872 SPATA32Q96LK8 384 aa20.84■□□□□ 0.93
CDKN1B-201ENST00000228872 SCAND2PQ9GZW5 306 aaPredicted RBP20.84■□□□□ 0.93
CDKN1B-201ENST00000228872 USP44Q9H0E7 712 aa20.84■□□□□ 0.93
CDKN1B-201ENST00000228872 UBTFL1P0CB47 393 aaPredicted RBP20.84■□□□□ 0.93
CDKN1B-201ENST00000228872 PDIA4P13667 645 aaKnown RBP20.84■□□□□ 0.93
CDKN1B-201ENST00000228872 CREBRFQ8IUR6 639 aa20.84■□□□□ 0.93
CDKN1B-201ENST00000228872 KCNB2Q92953 911 aa20.84■□□□□ 0.93
CDKN1B-201ENST00000228872 IPO4Q8TEX9 1081 aaKnown RBP20.83■□□□□ 0.93
CDKN1B-201ENST00000228872 TPCN1Q9ULQ1 816 aa20.83■□□□□ 0.93
CDKN1B-201ENST00000228872 SARM1Q6SZW1 724 aa20.83■□□□□ 0.92
CDKN1B-201ENST00000228872 LEO1Q8WVC0 666 aaPredicted RBP20.83■□□□□ 0.92
CDKN1B-201ENST00000228872 TFIP11Q9UBB9 837 aaKnown RBP20.83■□□□□ 0.92
CDKN1B-201ENST00000228872 NR1I2O75469 434 aa20.82■□□□□ 0.92
CDKN1B-201ENST00000228872 KIF1BPQ96EK5 621 aa20.82■□□□□ 0.92
CDKN1B-201ENST00000228872 ZNF446Q9NWS9 450 aa20.82■□□□□ 0.92
CDKN1B-201ENST00000228872 SKILP12757 684 aa20.82■□□□□ 0.92
CDKN1B-201ENST00000228872 PDCP20941 246 aa20.82■□□□□ 0.92
CDKN1B-201ENST00000228872 DDX54Q8TDD1 881 aaKnown RBP20.82■□□□□ 0.92
CDKN1B-201ENST00000228872 SLU7O95391 586 aaKnown RBP20.81■□□□□ 0.92
CDKN1B-201ENST00000228872 SLC20A2Q08357 652 aa20.81■□□□□ 0.92
CDKN1B-201ENST00000228872 POLA2Q14181 598 aa20.81■□□□□ 0.92
CDKN1B-201ENST00000228872 PPP1R42Q7Z4L9 355 aa20.81■□□□□ 0.92
CDKN1B-201ENST00000228872 MRFAP1L1Q96HT8 127 aa20.81■□□□□ 0.92
CDKN1B-201ENST00000228872 PLEKHG2Q9H7P9 1386 aa20.81■□□□□ 0.92
CDKN1B-201ENST00000228872 TULP2O00295 520 aa20.81■□□□□ 0.92
CDKN1B-201ENST00000228872 CAVIN2O95810 425 aa20.81■□□□□ 0.92
CDKN1B-201ENST00000228872 IQCB1Q15051 598 aa20.81■□□□□ 0.92
CDKN1B-201ENST00000228872 AMOTQ4VCS5 1084 aa20.81■□□□□ 0.92
CDKN1B-201ENST00000228872 CCDC30Q5VVM6 783 aa20.81■□□□□ 0.92
CDKN1B-201ENST00000228872 RUFY2Q8WXA3 655 aa20.81■□□□□ 0.92
CDKN1B-201ENST00000228872 CCZ1BP86790 482 aa20.8■□□□□ 0.92
CDKN1B-201ENST00000228872 CCZ1P86791 482 aaPredicted RBP20.8■□□□□ 0.92
CDKN1B-201ENST00000228872 PGBD1Q96JS3 809 aa20.8■□□□□ 0.92
CDKN1B-201ENST00000228872 RNF20Q5VTR2 975 aa20.8■□□□□ 0.92
CDKN1B-201ENST00000228872 BICD2Q8TD16 824 aa20.8■□□□□ 0.92
CDKN1B-201ENST00000228872 NECTIN2Q92692 538 aa20.8■□□□□ 0.92
CDKN1B-201ENST00000228872 TRMT1Q9NXH9 659 aaKnown RBP20.8■□□□□ 0.92
CDKN1B-201ENST00000228872 GOLGA6L19H0YKK7 550 aa20.79■□□□□ 0.92
CDKN1B-201ENST00000228872 PLEKHO1Q53GL0 409 aaPredicted RBP20.79■□□□□ 0.92
CDKN1B-201ENST00000228872 CCAR2Q8N163 923 aaKnown RBP20.79■□□□□ 0.92
CDKN1B-201ENST00000228872 CCDC69A6NI79 296 aa20.79■□□□□ 0.92
CDKN1B-201ENST00000228872 IL17REQ8NFR9 667 aa20.79■□□□□ 0.92
CDKN1B-201ENST00000228872 DNAJC2Q99543 621 aaKnown RBP20.79■□□□□ 0.92
CDKN1B-201ENST00000228872 NOL10Q9BSC4 688 aaKnown RBP20.79■□□□□ 0.92
CDKN1B-201ENST00000228872 COL22A1Q8NFW1 1626 aaPredicted RBP20.79■□□□□ 0.92
CDKN1B-201ENST00000228872 ADAMTS7Q9UKP4 1686 aa20.78■□□□□ 0.92
CDKN1B-201ENST00000228872 CEMIPQ8WUJ3 1361 aa20.78■□□□□ 0.92
CDKN1B-201ENST00000228872 CAPN2P17655 700 aa20.78■□□□□ 0.92
CDKN1B-201ENST00000228872 NECTIN1Q15223 517 aa20.78■□□□□ 0.92
CDKN1B-201ENST00000228872 USP42Q9H9J4 1324 aaKnown RBP20.78■□□□□ 0.92
CDKN1B-201ENST00000228872 CYP2C19P33261 490 aa20.78■□□□□ 0.92
CDKN1B-201ENST00000228872 BMS1Q14692 1282 aaKnown RBP20.78■□□□□ 0.92
CDKN1B-201ENST00000228872 BABAM1Q9NWV8 329 aa20.78■□□□□ 0.92
CDKN1B-201ENST00000228872 CACNA1FO60840 1977 aa20.78■□□□□ 0.92
CDKN1B-201ENST00000228872 PXDNLA1KZ92 1463 aa20.77■□□□□ 0.92
CDKN1B-201ENST00000228872 H2AFXP16104 143 aaPredicted RBP20.77■□□□□ 0.92
CDKN1B-201ENST00000228872 LARP1Q6PKG0 1096 aaKnown RBP20.77■□□□□ 0.92
CDKN1B-201ENST00000228872 C11orf57Q6ZUT1 292 aaPredicted RBP20.77■□□□□ 0.92
CDKN1B-201ENST00000228872 KCND1Q9NSA2 647 aa20.77■□□□□ 0.92
CDKN1B-201ENST00000228872 AKAP4Q5JQC9 854 aa20.77■□□□□ 0.92
CDKN1B-201ENST00000228872 OVOS2A0A0G2JMS6 1433 aa20.76■□□□□ 0.91
CDKN1B-201ENST00000228872 GLRX3O76003 335 aaKnown RBP20.76■□□□□ 0.91
CDKN1B-201ENST00000228872 ZKSCAN1P17029 563 aaPredicted RBP20.76■□□□□ 0.91
CDKN1B-201ENST00000228872 CHRNA2Q15822 529 aa20.76■□□□□ 0.91
CDKN1B-201ENST00000228872 USP16Q9Y5T5 823 aa20.76■□□□□ 0.91
CDKN1B-201ENST00000228872 PKD1L3Q7Z443 1732 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms