RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 GMFBP60983 142 aa12.69□□□□□ -0.38
NPHP4-207ENST00000470763 RPS11P62280 158 aaKnown RBP eCLIP12.69□□□□□ -0.38
NPHP4-207ENST00000470763 PRR5P85299 388 aa12.69□□□□□ -0.38
NPHP4-207ENST00000470763 RAB11FIP2Q7L804 512 aa12.69□□□□□ -0.38
NPHP4-207ENST00000470763 TMEM17Q86X19 198 aa12.69□□□□□ -0.38
NPHP4-207ENST00000470763 LDLRAD3Q86YD5 345 aa12.69□□□□□ -0.38
NPHP4-207ENST00000470763 OR4D10Q8NGI6 311 aa12.69□□□□□ -0.38
NPHP4-207ENST00000470763 OR13C2Q8NGS9 318 aa12.69□□□□□ -0.38
NPHP4-207ENST00000470763 CD180Q99467 661 aa12.69□□□□□ -0.38
NPHP4-207ENST00000470763 SLC25A32Q9H2D1 315 aa12.69□□□□□ -0.38
NPHP4-207ENST00000470763 BARX1Q9HBU1 254 aaPredicted RBP12.69□□□□□ -0.38
NPHP4-207ENST00000470763 NRIP3Q9NQ35 241 aa12.69□□□□□ -0.38
NPHP4-207ENST00000470763 EDARQ9UNE0 448 aa12.69□□□□□ -0.38
NPHP4-207ENST00000470763 TRAV20A0A0B4J274 112 aa12.68□□□□□ -0.38
NPHP4-207ENST00000470763 TRBV2A0A0J9YWF9 115 aa12.68□□□□□ -0.38
NPHP4-207ENST00000470763 OR1F1O43749 312 aa12.68□□□□□ -0.38
NPHP4-207ENST00000470763 PDX1P52945 283 aa12.68□□□□□ -0.38
NPHP4-207ENST00000470763 OLFML2AQ68BL7 652 aa12.68□□□□□ -0.38
NPHP4-207ENST00000470763 SLC8B1Q6J4K2 584 aa12.68□□□□□ -0.38
NPHP4-207ENST00000470763 TSSK4Q6SA08 328 aa12.68□□□□□ -0.38
NPHP4-207ENST00000470763 WDR88Q6ZMY6 472 aa12.68□□□□□ -0.38
NPHP4-207ENST00000470763 OR51A7Q8NH64 312 aa12.68□□□□□ -0.38
NPHP4-207ENST00000470763 ZMYND19Q96E35 227 aaPredicted RBP12.68□□□□□ -0.38
NPHP4-207ENST00000470763 TCEAL4Q96EI5 215 aa12.68□□□□□ -0.38
NPHP4-207ENST00000470763 PELI1Q96FA3 418 aa12.68□□□□□ -0.38
NPHP4-207ENST00000470763 ZNF75AQ96N20 296 aa12.68□□□□□ -0.38
NPHP4-207ENST00000470763 HS3ST2Q9Y278 367 aa12.68□□□□□ -0.38
NPHP4-207ENST00000470763 SCN2AQ99250 2005 aa12.68□□□□□ -0.38
NPHP4-207ENST00000470763 FAM86C2PA6NEL3 165 aa12.68□□□□□ -0.38
NPHP4-207ENST00000470763 ANKRD61A6NGH8 418 aa12.68□□□□□ -0.38
NPHP4-207ENST00000470763 K7ESM1 405 aa12.68□□□□□ -0.38
NPHP4-207ENST00000470763 PSMD9O00233 223 aa12.68□□□□□ -0.38
NPHP4-207ENST00000470763 F12P00748 615 aaPredicted RBP12.68□□□□□ -0.38
NPHP4-207ENST00000470763 SRMP19623 302 aa12.68□□□□□ -0.38
NPHP4-207ENST00000470763 MC3RP41968 323 aa12.68□□□□□ -0.38
NPHP4-207ENST00000470763 UBE2IP63279 158 aaKnown RBP12.68□□□□□ -0.38
NPHP4-207ENST00000470763 S100A12P80511 92 aa12.68□□□□□ -0.38
NPHP4-207ENST00000470763 CDK5R1Q15078 307 aa12.68□□□□□ -0.38
NPHP4-207ENST00000470763 ARSIQ5FYB1 569 aa12.68□□□□□ -0.38
NPHP4-207ENST00000470763 ASTLQ6HA08 431 aaPredicted RBP12.68□□□□□ -0.38
NPHP4-207ENST00000470763 OR2A12Q8NGT7 310 aa12.68□□□□□ -0.38
NPHP4-207ENST00000470763 SP7Q8TDD2 431 aaPredicted RBP12.68□□□□□ -0.38
NPHP4-207ENST00000470763 SMIM19Q96E16 107 aa12.68□□□□□ -0.38
NPHP4-207ENST00000470763 CASD1Q96PB1 797 aa12.68□□□□□ -0.38
NPHP4-207ENST00000470763 FAM83CQ9BQN1 747 aa12.68□□□□□ -0.38
NPHP4-207ENST00000470763 RASL12Q9NYN1 266 aa12.68□□□□□ -0.38
NPHP4-207ENST00000470763 ZNF230Q9UIE0 474 aaPredicted RBP12.68□□□□□ -0.38
NPHP4-207ENST00000470763 GNG8Q9UK08 70 aa12.68□□□□□ -0.38
NPHP4-207ENST00000470763 FOXJ3Q9UPW0 622 aa12.68□□□□□ -0.38
NPHP4-207ENST00000470763 KCNK7Q9Y2U2 307 aa12.68□□□□□ -0.38
NPHP4-207ENST00000470763 SCN3AQ9NY46 2000 aa12.68□□□□□ -0.38
NPHP4-207ENST00000470763 CENPVL1A0A0U1RR11 272 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 MEIS3P1A6NDR6 274 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 IFITM5A6NNB3 132 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 ZNF254O75437 659 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 GKN3PP0CG01 181 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 EDNRAP25101 427 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 DPP4P27487 766 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 LUMP51884 338 aaPredicted RBP12.67□□□□□ -0.38
NPHP4-207ENST00000470763 STX4Q12846 297 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 IL10RAQ13651 578 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 ZNF793Q6ZN11 406 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 NANPQ8TBE9 248 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 CNRIP1Q96F85 164 aaPredicted RBP12.67□□□□□ -0.38
NPHP4-207ENST00000470763 HS6ST2Q96MM7 605 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 AIF1LQ9BQI0 150 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 TMEM185BQ9H7F4 350 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 INPP5EQ9NRR6 644 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 SLC25A13Q9UJS0 675 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 LSM7Q9UK45 103 aaKnown RBP12.67□□□□□ -0.38
NPHP4-207ENST00000470763 SPTBN5Q9NRC6 3674 aaKnown RBP12.67□□□□□ -0.38
NPHP4-207ENST00000470763 CACNA1CQ13936 2221 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 REV3LO60673 3130 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 A0A087WV48 116 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 PIN1P1O15428 100 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 PCGF3Q3KNV8 242 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 ZNF528Q3MIS6 628 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 Q7L0L9 218 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 SLC36A1Q7Z2H8 476 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 RAD51AP1Q96B01 352 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 S100A16Q96FQ6 103 aaKnown RBP12.67□□□□□ -0.38
NPHP4-207ENST00000470763 CHST6Q9GZX3 395 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 BIN3Q9NQY0 253 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 CMC2Q9NRP2 79 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 SLC22A11Q9NSA0 550 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 A0A1B0GW55 424 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 LCMT2O60294 686 aaKnown RBP12.67□□□□□ -0.38
NPHP4-207ENST00000470763 LATS1O95835 1130 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 ELFN1P0C7U0 828 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 DUX4L2P0CJ85 424 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 DUX4L3P0CJ86 424 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 DUX4L4P0CJ87 422 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 DUX4L5P0CJ88 424 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 DUX4L6P0CJ89 424 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 DUX4L7P0CJ90 424 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 SPP1P10451 314 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 CNR1P21554 472 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 PPP2CBP62714 309 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 PPP2CAP67775 309 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 OVCH1Q7RTY7 1134 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms