RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 HAAOP46952 286 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 CDX1P47902 265 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 ACLYP53396 1101 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 CDH6P55285 790 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 DCDC1P59894 354 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 LSM3P62310 102 aaKnown RBP3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 CCNA1P78396 465 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 TFAMQ00059 246 aaKnown RBP3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 GTF2BQ00403 316 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 YWHAHQ04917 246 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 PUDPQ08623 228 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 RASGEF1BQ0VAM2 473 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 AANATQ16613 207 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 FAM83EQ2M2I3 478 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 PDLIM3Q53GG5 364 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 SLC35D3Q5M8T2 416 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 LCE1AQ5T7P2 110 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 DDI2Q5TDH0 399 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 METTL11BQ5VVY1 283 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 CES4AQ5XG92 561 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 GLYATQ6IB77 296 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 CAPN13Q6MZZ7 669 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 SPESP1Q6UW49 350 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 CEACAM20Q6UY09 585 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 EIF3MQ7L2H7 374 aaKnown RBP3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 STRADAQ7RTN6 431 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 SNX29P2Q8IUI4 249 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 DCUN1D3Q8IWE4 304 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 CCDC36Q8IYA8 594 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 NHLRC2Q8NBF2 726 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 ZNF540Q8NDQ6 660 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 C19orf18Q8NEA5 215 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 LPCAT1Q8NF37 534 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 OR5K1Q8NHB7 308 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 RNASE11Q8TAA1 199 aaKnown RBP3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 MAPK15Q8TD08 544 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 SLC13A3Q8WWT9 602 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 RBPMSQ93062 196 aaKnown RBP3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 TMBIM1Q969X1 311 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 C11orf24Q96F05 449 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 BSCL2Q96G97 398 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 CPB2Q96IY4 423 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 VPS39Q96JC1 886 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 PPP1R36Q96LQ0 422 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 RNF145Q96MT1 663 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 CCDC115Q96NT0 180 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 PARK7Q99497 189 aaKnown RBP3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 C12orf57Q99622 126 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 CBWD1Q9BRT8 395 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 SLC19A3Q9BZV2 496 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 GABARAPL1Q9H0R8 117 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 RHOJQ9H4E5 214 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 ACTL8Q9H568 366 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 ELOVL6Q9H5J4 265 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 POMKQ9H5K3 350 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 WDR55Q9H6Y2 383 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 NT5DC2Q9H857 520 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 NTN4Q9HB63 628 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 ACOT13Q9NPJ3 140 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 PLSCR3Q9NRY6 295 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 P4HTMQ9NXG6 502 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 IL37Q9NZH6 218 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 ZNF624Q9P2J8 865 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 OPTCQ9UBM4 332 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 SNX6Q9UNH7 406 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 PROCRQ9UNN8 238 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 LIPT1Q9Y234 373 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 MRPS7Q9Y2R9 242 aaKnown RBP3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 GMPPBQ9Y5P6 360 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 CACNG2Q9Y698 323 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 RNF215Q9Y6U7 377 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 LOC285556D6RIA3 1793 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 COL2A1P02458 1487 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 BRCA1P38398 1863 aaKnown RBP3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 A0A0U1RQK1 487 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 A0A0X1KG70 313 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 IQCMA0A1B0GVH7 501 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 ZNF320A2RRD8 509 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 A4D1N5 150 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 YDJCA8MPS7 323 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 ARHGEF33A8MVX0 844 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 F8VP50 259 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 H7C2Y5 167 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 M0R233 179 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 MSH4O15457 936 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 GRID2O43424 1007 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 PI15O43692 258 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 PRAF2O60831 178 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 HUS1O60921 280 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 TSC22D2O75157 780 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 EEDO75530 441 aaKnown RBP3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 DFFBO76075 338 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 SNAPINO95295 136 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 DHFRP00374 187 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 CST1P01037 141 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 APOHP02749 345 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 MT-ND2P03891 347 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 EDN1P05305 212 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 PROS1P07225 676 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 CHRNGP07510 517 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms