RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 ZNF836Q6ZNA1 936 aa9.63□□□□□ -0.87
RNF4-212ENST00000509258 LRRC74BQ6ZQY2 392 aa9.63□□□□□ -0.87
RNF4-212ENST00000509258 ZHX1-C8orf76Q96EF9 292 aa9.63□□□□□ -0.87
RNF4-212ENST00000509258 TRNT1Q96Q11 434 aaKnown RBP9.63□□□□□ -0.87
RNF4-212ENST00000509258 SLCO1B3Q9NPD5 702 aa9.63□□□□□ -0.87
RNF4-212ENST00000509258 POLE3Q9NRF9 147 aa9.63□□□□□ -0.87
RNF4-212ENST00000509258 CHRNA9Q9UGM1 479 aa9.63□□□□□ -0.87
RNF4-212ENST00000509258 OSGIN1Q9UJX0 560 aa9.63□□□□□ -0.87
RNF4-212ENST00000509258 SLC35A3Q9Y2D2 325 aa9.63□□□□□ -0.87
RNF4-212ENST00000509258 DSPPQ9NZW4 1301 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 RTTNQ86VV8 2226 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 IGKV3D-15A0A087WSY6 115 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 TMED7-TICAM2A0A0A6YYA0 188 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 DPRXA6NFQ7 191 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 TRPC5OSA6NMA1 111 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 SULT2B1O00204 365 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 AGR2O95994 175 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 SOD3P08294 240 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 DANCRP0C864 163 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 TFPIP10646 304 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 FKBP2P26885 142 aaKnown RBP9.62□□□□□ -0.87
RNF4-212ENST00000509258 ACAA2P42765 397 aaKnown RBP9.62□□□□□ -0.87
RNF4-212ENST00000509258 CSNK2A1P68400 391 aaPredicted RBP9.62□□□□□ -0.87
RNF4-212ENST00000509258 EPS8Q12929 822 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 NRF1Q16656 503 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 SLC2A7Q6PXP3 512 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 Q6ZT83 130 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 BHLHA15Q7RTS1 189 aaPredicted RBP9.62□□□□□ -0.87
RNF4-212ENST00000509258 GRINAQ7Z429 371 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 COMTD1Q86VU5 262 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 P2RY8Q86VZ1 359 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 FUNDC1Q8IVP5 155 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 MSRB3Q8IXL7 192 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 CLIP4Q8N3C7 705 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 ARFGAP2Q8N6H7 521 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 VPS37AQ8NEZ2 397 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 KBTBD8Q8NFY9 601 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 ZNF563Q8TA94 476 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 SMAP2Q8WU79 429 aaPredicted RBP9.62□□□□□ -0.87
RNF4-212ENST00000509258 SLC25A43Q8WUT9 341 aaPredicted RBP9.62□□□□□ -0.87
RNF4-212ENST00000509258 WDR60Q8WVS4 1066 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 OIT3Q8WWZ8 545 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 RADILQ96JH8 1075 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 HS6ST2Q96MM7 605 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 EBF4Q9BQW3 602 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 REG4Q9BYZ8 158 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 PAIP1Q9H074 479 aaKnown RBP9.62□□□□□ -0.87
RNF4-212ENST00000509258 EXOSC3Q9NQT5 275 aaKnown RBP9.62□□□□□ -0.87
RNF4-212ENST00000509258 SDR39U1Q9NRG7 319 aaPredicted RBP9.62□□□□□ -0.87
RNF4-212ENST00000509258 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.62□□□□□ -0.87
RNF4-212ENST00000509258 EMC3Q9P0I2 261 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 TMED7Q9Y3B3 224 aa9.62□□□□□ -0.87
RNF4-212ENST00000509258 MAGED1Q9Y5V3 778 aaPredicted RBP9.62□□□□□ -0.87
RNF4-212ENST00000509258 A0A1W2PR80 420 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 ZNF724A8MTY0 619 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 RFXANKO14593 260 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 FRS3O43559 492 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 TLX2O43763 284 aaPredicted RBP9.61□□□□□ -0.87
RNF4-212ENST00000509258 SLC22A3O75751 556 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 PMS2P2O95744 297 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 IFNA2P01563 188 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 TFPTP0C1Z6 253 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 NR2F1P10589 423 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 IDO1P14902 403 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 COX5AP20674 150 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 TACR3P29371 465 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 CDKN1AP38936 164 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 APOBEC1P41238 236 aaKnown RBP9.61□□□□□ -0.87
RNF4-212ENST00000509258 H3F3AP84243 136 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 BSPH1Q075Z2 132 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 SPOCK1Q08629 439 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 BNIP2Q12982 314 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 PPA1Q15181 289 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 STK11Q15831 433 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 ZNF672Q499Z4 452 aaPredicted RBP9.61□□□□□ -0.87
RNF4-212ENST00000509258 TIMM23BQ5SRD1 257 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 ATG16L1Q676U5 607 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 EPGNQ6UW88 154 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 CROCCP2Q86T23 111 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 MTDHQ86UE4 582 aaKnown RBP9.61□□□□□ -0.87
RNF4-212ENST00000509258 ZNF100Q8IYN0 542 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 KIRREL3Q8IZU9 778 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 ZNF433Q8N7K0 673 aaPredicted RBP9.61□□□□□ -0.87
RNF4-212ENST00000509258 MAPK1IP1LQ8NDC0 245 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 PIWIL2Q8TC59 973 aaKnown RBP9.61□□□□□ -0.87
RNF4-212ENST00000509258 SLC38A5Q8WUX1 472 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 GTF2H4Q92759 462 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 MAL2Q969L2 176 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 GRIP2Q9C0E4 1043 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 SLCO5A1Q9H2Y9 848 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 TPT1P8Q9HAU6 139 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 SLC52A3Q9NQ40 469 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 NKIRAS1Q9NYS0 192 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 SLC25A37Q9NYZ2 338 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 ZIM2Q9NZV7 527 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 SLAMF8Q9P0V8 285 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 MGAT4BQ9UQ53 548 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 LIPT1Q9Y234 373 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 USH1CQ9Y6N9 552 aa9.61□□□□□ -0.87
RNF4-212ENST00000509258 CDHR4A6H8M9 788 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms