RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 ARL5BQ96KC2 179 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 TSSK3Q96PN8 268 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 SNX18Q96RF0 628 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 VRK1Q99986 396 aaPredicted RBP4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 THUMPD3Q9BV44 507 aaKnown RBP4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 CCDC106Q9BWC9 280 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 ACTRT3Q9BYD9 372 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 NMUR2Q9GZQ4 415 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 PLK3Q9H4B4 646 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 RRAGDQ9NQL2 400 aaPredicted RBP4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 SLC7A10Q9NS82 523 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 GPATCH2Q9NW75 528 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 C1orf109Q9NX04 203 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 KCNE3Q9Y6H6 103 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 TLDC2A0PJX2 215 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 TMEM89A2RUT3 159 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 G3V2L1 256 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 H3BQF6 201 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 KLF11O14901 512 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 SCAMP2O15127 329 aaKnown RBP4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 BCAS1O75363 584 aaPredicted RBP4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 CRCPO75575 148 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 CYP7B1O75881 506 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 URI1O94763 535 aaPredicted RBP4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 SNUPNO95149 360 aaKnown RBP4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 WNT11O96014 354 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 KRT16P08779 473 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 IGFBP1P08833 259 aaPredicted RBP4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 OR4A8P0C604 315 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 UBTFL6P0CB48 400 aaPredicted RBP4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 TFPIP10646 304 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 UROSP10746 265 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 NEFHP12036 1026 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 DAOP14920 347 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 PGCP20142 388 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 PCMT1P22061 227 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 GCAP28676 217 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 MAGEA8P43361 318 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 ASMTP46597 345 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 DVL1P1P54792 670 aaPredicted RBP4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 PRPS1P60891 318 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 PSMA6P60900 246 aaKnown RBP4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 RPL38P63173 70 aaKnown RBP4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 TGFBR3Q03167 851 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 LGALS3BPQ08380 585 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 TP53BP2Q13625 1128 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 RIN1Q13671 783 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 CCNIQ14094 377 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 TRIP10Q15642 601 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 ZNF141Q15928 474 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 RFTN2Q52LD8 501 aaPredicted RBP4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 HIKESHIQ53FT3 197 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 PRR31Q5SQ13 230 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 CLEC6AQ6EIG7 209 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 KLHL24Q6TFL4 600 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 UGT2A3Q6UWM9 527 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 USP43Q70EL4 1123 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 ZNF572Q7Z3I7 529 aaPredicted RBP4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 SPATA19Q7Z5L4 167 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 LSRQ86X29 649 aaPredicted RBP4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 ZCCHC24Q8N2G6 241 aaKnown RBP4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 LRRC17Q8N6Y2 441 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 OR56A1Q8NGH5 318 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 OR5D16Q8NGK9 328 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 OR2T11Q8NH01 316 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 PSMA8Q8TAA3 256 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 SFXN5Q8TD22 340 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 ADAMTS15Q8TE58 950 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 FAM216AQ8WUB2 273 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 TMEM234Q8WY98 164 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 GCDHQ92947 438 aaPredicted RBP4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 MTERF3Q96E29 417 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 DNAJA3Q96EY1 480 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 BOD1Q96IK1 185 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 SLC38A2Q96QD8 506 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 OR7D2Q96RA2 312 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 SDF2Q99470 211 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 KATNB1Q9BVA0 655 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 OR11A1Q9GZK7 315 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 LAT2Q9GZY6 243 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 RAB1BQ9H0U4 201 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 METTL17Q9H7H0 456 aaPredicted RBP4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 ZNF696Q9H7X3 374 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 CTPS2Q9NRF8 586 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 SERINC1Q9NRX5 453 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 ACER3Q9NUN7 267 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 UPB1Q9UBR1 384 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 CHRNA9Q9UGM1 479 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 BAIAP2L1Q9UHR4 511 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 ATP6V1HQ9UI12 483 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 KCNE5Q9UJ90 142 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 EMCNQ9ULC0 261 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 FAF1Q9UNN5 650 aaPredicted RBP4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 SLC9A8Q9Y2E8 581 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 HDGFL3Q9Y3E1 203 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 FLVCR1Q9Y5Y0 555 aa4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 SPIN1Q9Y657 262 aaPredicted RBP4.45□□□□□ -1.7
SNRNP40-204ENST00000474025 A0A087WUV0 522 aaPredicted RBP4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 EXOC1LA0A1B0GW35 172 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms